RNA–Protein interactions for RNA: ENST00000291458.9

CCDC58-201, Transcript of coiled-coil domain containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC58, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-201ENST00000291458 USP17L3A6NCW0 530 aa12.29□□□□□ -0.44
CCDC58-201ENST00000291458 USP17L4A6NCW7 530 aa12.29□□□□□ -0.44
CCDC58-201ENST00000291458 ADM5C9JUS6 153 aa12.29□□□□□ -0.44
CCDC58-201ENST00000291458 RPS12P25398 132 aaKnown RBP12.29□□□□□ -0.44
CCDC58-201ENST00000291458 RSBN1LQ6PCB5 846 aaPredicted RBP12.29□□□□□ -0.44
CCDC58-201ENST00000291458 LDHAL6AQ6ZMR3 332 aa12.29□□□□□ -0.44
CCDC58-201ENST00000291458 USP17L1Q7RTZ2 530 aa12.29□□□□□ -0.44
CCDC58-201ENST00000291458 ANKRD44Q8N8A2 993 aa12.29□□□□□ -0.44
CCDC58-201ENST00000291458 KLHDC4Q8TBB5 520 aa12.29□□□□□ -0.44
CCDC58-201ENST00000291458 FRAT1Q92837 279 aaPredicted RBP12.29□□□□□ -0.44
CCDC58-201ENST00000291458 GGA3Q9NZ52 723 aa12.29□□□□□ -0.44
CCDC58-201ENST00000291458 SCAF8Q9UPN6 1271 aaKnown RBP12.29□□□□□ -0.44
CCDC58-201ENST00000291458 LEMD3Q9Y2U8 911 aa12.29□□□□□ -0.44
CCDC58-201ENST00000291458 CNTNAP1P78357 1384 aa12.29□□□□□ -0.44
CCDC58-201ENST00000291458 CELF2O95319 508 aaKnown RBP12.28□□□□□ -0.44
CCDC58-201ENST00000291458 VIL1P09327 827 aaKnown RBP12.28□□□□□ -0.44
CCDC58-201ENST00000291458 RARSP54136 660 aaKnown RBP12.28□□□□□ -0.44
CCDC58-201ENST00000291458 IRX5P78411 483 aaPredicted RBP12.28□□□□□ -0.44
CCDC58-201ENST00000291458 USP48Q86UV5 1035 aa12.28□□□□□ -0.44
CCDC58-201ENST00000291458 COA1Q9GZY4 146 aa12.28□□□□□ -0.44
CCDC58-201ENST00000291458 TNNQ9UQP3 1299 aa12.28□□□□□ -0.44
CCDC58-201ENST00000291458 CT47B1P0C2W7 299 aaPredicted RBP12.27□□□□□ -0.45
CCDC58-201ENST00000291458 GTF2IP78347 998 aa12.27□□□□□ -0.45
CCDC58-201ENST00000291458 PODNQ7Z5L7 613 aa12.27□□□□□ -0.45
CCDC58-201ENST00000291458 DPF2Q92785 391 aa12.27□□□□□ -0.45
CCDC58-201ENST00000291458 API5Q9BZZ5 524 aaKnown RBP12.27□□□□□ -0.45
CCDC58-201ENST00000291458 USP44Q9H0E7 712 aa12.27□□□□□ -0.45
CCDC58-201ENST00000291458 UTYO14607 1347 aa12.27□□□□□ -0.45
CCDC58-201ENST00000291458 KIF16BQ96L93 1317 aa12.27□□□□□ -0.45
CCDC58-201ENST00000291458 MYH13Q9UKX3 1938 aa12.27□□□□□ -0.45
CCDC58-201ENST00000291458 CEP350Q5VT06 3117 aa12.26□□□□□ -0.45
CCDC58-201ENST00000291458 F8W031 263 aaPredicted RBP12.26□□□□□ -0.45
CCDC58-201ENST00000291458 BCAR3O75815 825 aa12.26□□□□□ -0.45
CCDC58-201ENST00000291458 USP17L8P0C7I0 530 aa12.26□□□□□ -0.45
CCDC58-201ENST00000291458 UBTFL1P0CB47 393 aaPredicted RBP12.26□□□□□ -0.45
CCDC58-201ENST00000291458 HSPA1AP0DMV8 641 aaKnown RBP12.26□□□□□ -0.45
CCDC58-201ENST00000291458 HSPA1BP0DMV9 641 aaKnown RBP12.26□□□□□ -0.45
CCDC58-201ENST00000291458 VEGFBP49765 207 aa12.26□□□□□ -0.45
CCDC58-201ENST00000291458 LRRC24Q50LG9 513 aa12.26□□□□□ -0.45
CCDC58-201ENST00000291458 METTL24Q5JXM2 366 aa12.26□□□□□ -0.45
CCDC58-201ENST00000291458 KRT26Q7Z3Y9 468 aa12.26□□□□□ -0.45
CCDC58-201ENST00000291458 ZNF804AQ7Z570 1209 aa12.26□□□□□ -0.45
CCDC58-201ENST00000291458 KIAA0825Q8IV33 1275 aa12.26□□□□□ -0.45
CCDC58-201ENST00000291458 AGBL3Q8NEM8 1001 aa12.26□□□□□ -0.45
CCDC58-201ENST00000291458 CLUAP1Q96AJ1 413 aa12.26□□□□□ -0.45
CCDC58-201ENST00000291458 OCEL1Q9H607 264 aa12.26□□□□□ -0.45
CCDC58-201ENST00000291458 ARAP2Q8WZ64 1704 aa12.25□□□□□ -0.45
CCDC58-201ENST00000291458 SASH1O94885 1247 aa12.25□□□□□ -0.45
CCDC58-201ENST00000291458 SEC24BO95487 1268 aa12.25□□□□□ -0.45
CCDC58-201ENST00000291458 GYG1P46976 350 aa12.25□□□□□ -0.45
CCDC58-201ENST00000291458 DACT2Q5SW24 774 aa12.25□□□□□ -0.45
CCDC58-201ENST00000291458 ANGEL2Q5VTE6 544 aaKnown RBP12.25□□□□□ -0.45
CCDC58-201ENST00000291458 TTLL5Q6EMB2 1281 aa12.25□□□□□ -0.45
CCDC58-201ENST00000291458 JMYQ8N9B5 988 aa12.25□□□□□ -0.45
CCDC58-201ENST00000291458 DCPSQ96C86 337 aaKnown RBP12.25□□□□□ -0.45
CCDC58-201ENST00000291458 MEIS3Q99687 375 aa12.25□□□□□ -0.45
CCDC58-201ENST00000291458 SIL1Q9H173 461 aa12.25□□□□□ -0.45
CCDC58-201ENST00000291458 CD209Q9NNX6 404 aa12.25□□□□□ -0.45
CCDC58-201ENST00000291458 MYOZ2Q9NPC6 264 aa12.25□□□□□ -0.45
CCDC58-201ENST00000291458 IQSEC3Q9UPP2 1182 aaPredicted RBP12.25□□□□□ -0.45
CCDC58-201ENST00000291458 LRRFIP2Q9Y608 721 aaKnown RBP12.25□□□□□ -0.45
CCDC58-201ENST00000291458 SCARF1Q14162 830 aa12.24□□□□□ -0.45
CCDC58-201ENST00000291458 DEFB115Q30KQ5 88 aa12.24□□□□□ -0.45
CCDC58-201ENST00000291458 RABL6Q3YEC7 729 aaPredicted RBP12.24□□□□□ -0.45
CCDC58-201ENST00000291458 CST9Q5W186 159 aa12.24□□□□□ -0.45
CCDC58-201ENST00000291458 CYP4F22Q6NT55 531 aa12.24□□□□□ -0.45
CCDC58-201ENST00000291458 CDC37L1Q7L3B6 337 aa12.24□□□□□ -0.45
CCDC58-201ENST00000291458 MFRPQ9BY79 579 aa12.24□□□□□ -0.45
CCDC58-201ENST00000291458 RYDENQ9NUL5 291 aaKnown RBP12.24□□□□□ -0.45
CCDC58-201ENST00000291458 ZNF609O15014 1411 aa12.23□□□□□ -0.45
CCDC58-201ENST00000291458 IRS2Q9Y4H2 1338 aa12.23□□□□□ -0.45
CCDC58-201ENST00000291458 TRIM27P14373 513 aa12.23□□□□□ -0.45
CCDC58-201ENST00000291458 PLCG2P16885 1265 aa12.23□□□□□ -0.45
CCDC58-201ENST00000291458 ZNF280AP59817 542 aaPredicted RBP12.23□□□□□ -0.45
CCDC58-201ENST00000291458 CHAF1AQ13111 956 aaPredicted RBP12.23□□□□□ -0.45
CCDC58-201ENST00000291458 STRIP1Q5VSL9 837 aa12.23□□□□□ -0.45
CCDC58-201ENST00000291458 SULF1Q8IWU6 871 aa12.23□□□□□ -0.45
CCDC58-201ENST00000291458 ZC3H15Q8WU90 426 aaKnown RBP12.23□□□□□ -0.45
CCDC58-201ENST00000291458 GMLQ99445 158 aa12.23□□□□□ -0.45
CCDC58-201ENST00000291458 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.23□□□□□ -0.45
CCDC58-201ENST00000291458 MROH5Q6ZUA9 1318 aa12.22□□□□□ -0.45
CCDC58-201ENST00000291458 MYO3BQ8WXR4 1341 aa12.22□□□□□ -0.45
CCDC58-201ENST00000291458 WDR33Q9C0J8 1336 aaKnown RBP12.22□□□□□ -0.45
CCDC58-201ENST00000291458 NBPF9Q3BBW0 867 aa12.22□□□□□ -0.45
CCDC58-201ENST00000291458 PRAMEF18Q5VWM3 479 aa12.22□□□□□ -0.45
CCDC58-201ENST00000291458 VPS37DQ86XT2 251 aa12.22□□□□□ -0.45
CCDC58-201ENST00000291458 OGFOD1Q8N543 542 aa12.22□□□□□ -0.45
CCDC58-201ENST00000291458 CERS5Q8N5B7 392 aa12.22□□□□□ -0.45
CCDC58-201ENST00000291458 CAPNS2Q96L46 248 aa12.22□□□□□ -0.45
CCDC58-201ENST00000291458 PA2G4Q9UQ80 394 aaKnown RBP12.22□□□□□ -0.45
CCDC58-201ENST00000291458 TLL2Q9Y6L7 1015 aa12.22□□□□□ -0.45
CCDC58-201ENST00000291458 ECM29Q5VYK3 1845 aa12.22□□□□□ -0.45
CCDC58-201ENST00000291458 THSD7BQ9C0I4 1608 aa12.22□□□□□ -0.45
CCDC58-201ENST00000291458 ZBED9Q6R2W3 1325 aa12.21□□□□□ -0.45
CCDC58-201ENST00000291458 RASSF10A6NK89 507 aa12.21□□□□□ -0.45
CCDC58-201ENST00000291458 AOC2O75106 756 aa12.21□□□□□ -0.45
CCDC58-201ENST00000291458 FBXO22Q8NEZ5 403 aa12.21□□□□□ -0.45
CCDC58-201ENST00000291458 CDCA5Q96FF9 252 aa12.21□□□□□ -0.45
CCDC58-201ENST00000291458 PGAP2Q9UHJ9 254 aa12.21□□□□□ -0.45
CCDC58-201ENST00000291458 HDAC9Q9UKV0 1011 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms