RNA–Protein interactions for RNA: ENST00000289957.2

CHRNB3-201, Transcript of cholinergic receptor nicotinic beta 3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNB3, Length 2,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB3-201ENST00000289957 FAM227BQ96M60 508 aa13.84□□□□□ -0.19
CHRNB3-201ENST00000289957 KIF2CQ99661 725 aa13.84□□□□□ -0.19
CHRNB3-201ENST00000289957 ARID4AP29374 1257 aaPredicted RBP13.83□□□□□ -0.2
CHRNB3-201ENST00000289957 RAB3GAP1Q15042 981 aa13.83□□□□□ -0.2
CHRNB3-201ENST00000289957 GRIK5Q16478 980 aa13.83□□□□□ -0.2
CHRNB3-201ENST00000289957 FBXO33Q7Z6M2 555 aa13.83□□□□□ -0.2
CHRNB3-201ENST00000289957 CNKSR1Q969H4 720 aa13.83□□□□□ -0.2
CHRNB3-201ENST00000289957 SEC62Q99442 399 aaKnown RBP13.83□□□□□ -0.2
CHRNB3-201ENST00000289957 PAG1Q9NWQ8 432 aa13.83□□□□□ -0.2
CHRNB3-201ENST00000289957 PODXL2Q9NZ53 605 aa13.83□□□□□ -0.2
CHRNB3-201ENST00000289957 TRAK2O60296 914 aa13.83□□□□□ -0.2
CHRNB3-201ENST00000289957 WASHC4Q2M389 1173 aa13.83□□□□□ -0.2
CHRNB3-201ENST00000289957 CHMLP26374 656 aa13.82□□□□□ -0.2
CHRNB3-201ENST00000289957 CHAF1AQ13111 956 aaPredicted RBP13.82□□□□□ -0.2
CHRNB3-201ENST00000289957 CLEC17AQ6ZS10 378 aa13.82□□□□□ -0.2
CHRNB3-201ENST00000289957 VPS37DQ86XT2 251 aa13.82□□□□□ -0.2
CHRNB3-201ENST00000289957 SPATA5Q8NB90 893 aa13.82□□□□□ -0.2
CHRNB3-201ENST00000289957 BCS1LQ9Y276 419 aa13.82□□□□□ -0.2
CHRNB3-201ENST00000289957 COL4A5P29400 1685 aa13.82□□□□□ -0.2
CHRNB3-201ENST00000289957 HIBADHP31937 336 aaKnown RBP13.81□□□□□ -0.2
CHRNB3-201ENST00000289957 TGFB2P61812 414 aa13.81□□□□□ -0.2
CHRNB3-201ENST00000289957 CWC27Q6UX04 472 aaKnown RBP13.81□□□□□ -0.2
CHRNB3-201ENST00000289957 GBP4Q96PP9 640 aa13.81□□□□□ -0.2
CHRNB3-201ENST00000289957 FSD1Q9BTV5 496 aa13.81□□□□□ -0.2
CHRNB3-201ENST00000289957 MXD3Q9BW11 206 aa13.81□□□□□ -0.2
CHRNB3-201ENST00000289957 DBNDD1Q9H9R9 158 aa13.81□□□□□ -0.2
CHRNB3-201ENST00000289957 PIM2Q9P1W9 311 aa13.81□□□□□ -0.2
CHRNB3-201ENST00000289957 LEMD3Q9Y2U8 911 aa13.81□□□□□ -0.2
CHRNB3-201ENST00000289957 A0A0D9SFI3 127 aa13.81□□□□□ -0.2
CHRNB3-201ENST00000289957 K7ELQ4 463 aaPredicted RBP13.81□□□□□ -0.2
CHRNB3-201ENST00000289957 MRE11P49959 708 aa13.81□□□□□ -0.2
CHRNB3-201ENST00000289957 AOC3Q16853 763 aa13.81□□□□□ -0.2
CHRNB3-201ENST00000289957 CNTROBQ8N137 903 aa13.81□□□□□ -0.2
CHRNB3-201ENST00000289957 ZNF277Q9NRM2 450 aaPredicted RBP13.81□□□□□ -0.2
CHRNB3-201ENST00000289957 CD2APQ9Y5K6 639 aa13.81□□□□□ -0.2
CHRNB3-201ENST00000289957 ATP2B4P23634 1241 aa13.8□□□□□ -0.2
CHRNB3-201ENST00000289957 SKOR2Q2VWA4 1001 aaPredicted RBP13.8□□□□□ -0.2
CHRNB3-201ENST00000289957 CAVIN4Q5BKX8 364 aa13.8□□□□□ -0.2
CHRNB3-201ENST00000289957 CCDC129Q6ZRS4 1044 aa13.8□□□□□ -0.2
CHRNB3-201ENST00000289957 EVI5LQ96CN4 794 aa13.8□□□□□ -0.2
CHRNB3-201ENST00000289957 SOCS7O14512 581 aa13.8□□□□□ -0.2
CHRNB3-201ENST00000289957 PRELPP51888 382 aa13.8□□□□□ -0.2
CHRNB3-201ENST00000289957 NMIQ13287 307 aaPredicted RBP13.8□□□□□ -0.2
CHRNB3-201ENST00000289957 ZNF589Q86UQ0 364 aaPredicted RBP13.79□□□□□ -0.2
CHRNB3-201ENST00000289957 ZNF384Q8TF68 577 aa13.79□□□□□ -0.2
CHRNB3-201ENST00000289957 CD209Q9NNX6 404 aa13.79□□□□□ -0.2
CHRNB3-201ENST00000289957 SCN9AQ15858 1988 aa13.79□□□□□ -0.2
CHRNB3-201ENST00000289957 IDH1O75874 414 aaKnown RBP13.79□□□□□ -0.2
CHRNB3-201ENST00000289957 XRCC6P12956 609 aaKnown RBP eCLIP13.79□□□□□ -0.2
CHRNB3-201ENST00000289957 RASSF7Q02833 373 aa13.79□□□□□ -0.2
CHRNB3-201ENST00000289957 DALRD3Q5D0E6 543 aaKnown RBP13.79□□□□□ -0.2
CHRNB3-201ENST00000289957 KBTBD3Q8NAB2 608 aa13.79□□□□□ -0.2
CHRNB3-201ENST00000289957 SYT17Q9BSW7 474 aa13.79□□□□□ -0.2
CHRNB3-201ENST00000289957 ABCF2Q9UG63 623 aa13.79□□□□□ -0.2
CHRNB3-201ENST00000289957 MYH13Q9UKX3 1938 aa13.78□□□□□ -0.2
CHRNB3-201ENST00000289957 PRDX5P30044 214 aa13.78□□□□□ -0.2
CHRNB3-201ENST00000289957 MED23Q9ULK4 1368 aa13.78□□□□□ -0.2
CHRNB3-201ENST00000289957 NFKBIEO00221 500 aa13.78□□□□□ -0.2
CHRNB3-201ENST00000289957 RABEP1Q15276 862 aa13.78□□□□□ -0.2
CHRNB3-201ENST00000289957 TMC4Q7Z404 712 aa13.78□□□□□ -0.2
CHRNB3-201ENST00000289957 ADGRA1Q86SQ6 560 aa13.78□□□□□ -0.2
CHRNB3-201ENST00000289957 TNPO1Q92973 898 aaKnown RBP13.78□□□□□ -0.2
CHRNB3-201ENST00000289957 ZNF512BQ96KM6 892 aaPredicted RBP13.78□□□□□ -0.2
CHRNB3-201ENST00000289957 UQCRFS1P1P0C7P4 283 aa13.77□□□□□ -0.21
CHRNB3-201ENST00000289957 TDRD7Q8NHU6 1098 aaKnown RBP13.77□□□□□ -0.21
CHRNB3-201ENST00000289957 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.77□□□□□ -0.21
CHRNB3-201ENST00000289957 ESYT1Q9BSJ8 1104 aa13.77□□□□□ -0.21
CHRNB3-201ENST00000289957 SPRYD3Q8NCJ5 442 aa13.76□□□□□ -0.21
CHRNB3-201ENST00000289957 FBXW7Q969H0 707 aa13.76□□□□□ -0.21
CHRNB3-201ENST00000289957 OSBP2Q969R2 916 aa13.76□□□□□ -0.21
CHRNB3-201ENST00000289957 ZC3H12CQ9C0D7 883 aaKnown RBP13.76□□□□□ -0.21
CHRNB3-201ENST00000289957 YDJCA8MPS7 323 aa13.76□□□□□ -0.21
CHRNB3-201ENST00000289957 M0R2C6 588 aa13.76□□□□□ -0.21
CHRNB3-201ENST00000289957 CCDC93Q567U6 631 aa13.76□□□□□ -0.21
CHRNB3-201ENST00000289957 ZNF804AQ7Z570 1209 aa13.76□□□□□ -0.21
CHRNB3-201ENST00000289957 RTFDC1Q9BY42 306 aaPredicted RBP13.76□□□□□ -0.21
CHRNB3-201ENST00000289957 PUS7LQ9H0K6 701 aaKnown RBP13.76□□□□□ -0.21
CHRNB3-201ENST00000289957 YBX3P16989 372 aaKnown RBP eCLIP13.75□□□□□ -0.21
CHRNB3-201ENST00000289957 GTF2IP78347 998 aa13.75□□□□□ -0.21
CHRNB3-201ENST00000289957 SLC9C2Q5TAH2 1124 aa13.75□□□□□ -0.21
CHRNB3-201ENST00000289957 VPS53Q5VIR6 699 aa13.75□□□□□ -0.21
CHRNB3-201ENST00000289957 C15orf52Q6ZUT6 534 aaKnown RBP13.75□□□□□ -0.21
CHRNB3-201ENST00000289957 CERS5Q8N5B7 392 aa13.75□□□□□ -0.21
CHRNB3-201ENST00000289957 DIAPH3Q9NSV4 1193 aa13.75□□□□□ -0.21
CHRNB3-201ENST00000289957 PPIP5K2O43314 1243 aa13.75□□□□□ -0.21
CHRNB3-201ENST00000289957 IL1R1P14778 569 aa13.75□□□□□ -0.21
CHRNB3-201ENST00000289957 PTH1RQ03431 593 aa13.75□□□□□ -0.21
CHRNB3-201ENST00000289957 MAGEB6Q8N7X4 407 aa13.75□□□□□ -0.21
CHRNB3-201ENST00000289957 TMX4Q9H1E5 349 aaPredicted RBP13.75□□□□□ -0.21
CHRNB3-201ENST00000289957 DOCK2Q92608 1830 aa13.74□□□□□ -0.21
CHRNB3-201ENST00000289957 SGSM2O43147 1006 aa13.74□□□□□ -0.21
CHRNB3-201ENST00000289957 ECE2O60344 883 aa13.74□□□□□ -0.21
CHRNB3-201ENST00000289957 PDE6AP16499 860 aa13.74□□□□□ -0.21
CHRNB3-201ENST00000289957 MIGA1Q8NAN2 632 aa13.74□□□□□ -0.21
CHRNB3-201ENST00000289957 ZNF532Q9HCE3 1301 aa13.74□□□□□ -0.21
CHRNB3-201ENST00000289957 FER1L6Q2WGJ9 1857 aa13.74□□□□□ -0.21
CHRNB3-201ENST00000289957 MYH7P12883 1935 aa13.74□□□□□ -0.21
CHRNB3-201ENST00000289957 TCRBV5S4A2TA0A5A2 114 aa13.74□□□□□ -0.21
CHRNB3-201ENST00000289957 F8W031 263 aaPredicted RBP13.74□□□□□ -0.21
CHRNB3-201ENST00000289957 DIXDC1Q155Q3 683 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms