RNA–Protein interactions for RNA: ENST00000284771.6

PDLIM3-203, Transcript of PDZ and LIM domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM3, Length 1,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-203ENST00000284771 ARHGAP27Q6ZUM4 889 aa26.57■■□□□ 1.84
PDLIM3-203ENST00000284771 KCNQ5Q9NR82 932 aa26.57■■□□□ 1.84
PDLIM3-203ENST00000284771 CYP2E1P05181 493 aaPredicted RBP26.57■■□□□ 1.84
PDLIM3-203ENST00000284771 SDSP20132 328 aa26.57■■□□□ 1.84
PDLIM3-203ENST00000284771 VPS33BQ9H267 617 aa26.57■■□□□ 1.84
PDLIM3-203ENST00000284771 JAG2Q9Y219 1238 aa26.56■■□□□ 1.84
PDLIM3-203ENST00000284771 SCN9AQ15858 1988 aa26.56■■□□□ 1.84
PDLIM3-203ENST00000284771 LARGE2Q8N3Y3 721 aa26.55■■□□□ 1.84
PDLIM3-203ENST00000284771 MYH13Q9UKX3 1938 aa26.55■■□□□ 1.84
PDLIM3-203ENST00000284771 CCDC88AQ3V6T2 1871 aa26.55■■□□□ 1.84
PDLIM3-203ENST00000284771 YDJCA8MPS7 323 aa26.54■■□□□ 1.84
PDLIM3-203ENST00000284771 GOLIM4O00461 696 aa26.54■■□□□ 1.84
PDLIM3-203ENST00000284771 SEMA3EO15041 775 aa26.54■■□□□ 1.84
PDLIM3-203ENST00000284771 ECE2O60344 883 aa26.54■■□□□ 1.84
PDLIM3-203ENST00000284771 FRAT2O75474 233 aaPredicted RBP26.54■■□□□ 1.84
PDLIM3-203ENST00000284771 TBC1D9Q6ZT07 1266 aa26.54■■□□□ 1.84
PDLIM3-203ENST00000284771 PODNQ7Z5L7 613 aa26.54■■□□□ 1.84
PDLIM3-203ENST00000284771 PAG1Q9NWQ8 432 aa26.54■■□□□ 1.84
PDLIM3-203ENST00000284771 DENND2AQ9ULE3 1009 aa26.54■■□□□ 1.84
PDLIM3-203ENST00000284771 TRIM6-TRIM34B2RNG4 842 aa26.54■■□□□ 1.84
PDLIM3-203ENST00000284771 GPR162Q16538 588 aa26.54■■□□□ 1.84
PDLIM3-203ENST00000284771 MYO5AQ9Y4I1 1855 aaKnown RBP26.53■■□□□ 1.84
PDLIM3-203ENST00000284771 SBF1O95248 1867 aa26.52■■□□□ 1.84
PDLIM3-203ENST00000284771 RILPL2Q969X0 211 aa26.52■■□□□ 1.84
PDLIM3-203ENST00000284771 G3V3G9 751 aa26.51■■□□□ 1.83
PDLIM3-203ENST00000284771 CHAF1AQ13111 956 aaPredicted RBP26.51■■□□□ 1.83
PDLIM3-203ENST00000284771 DCAF8Q5TAQ9 597 aa26.51■■□□□ 1.83
PDLIM3-203ENST00000284771 PIH1D3Q9NQM4 214 aaKnown RBP26.51■■□□□ 1.83
PDLIM3-203ENST00000284771 PDS5AQ29RF7 1337 aaKnown RBP26.51■■□□□ 1.83
PDLIM3-203ENST00000284771 GTF2IP78347 998 aa26.5■■□□□ 1.83
PDLIM3-203ENST00000284771 EVI5LQ96CN4 794 aa26.5■■□□□ 1.83
PDLIM3-203ENST00000284771 FAM205AQ6ZU69 1335 aa26.49■■□□□ 1.83
PDLIM3-203ENST00000284771 CHGBP05060 677 aa26.49■■□□□ 1.83
PDLIM3-203ENST00000284771 TTLL5Q6EMB2 1281 aa26.49■■□□□ 1.83
PDLIM3-203ENST00000284771 CNTROBQ8N137 903 aa26.49■■□□□ 1.83
PDLIM3-203ENST00000284771 ZNF646O15015 1829 aaPredicted RBP26.48■■□□□ 1.83
PDLIM3-203ENST00000284771 AK9Q5TCS8 1911 aa26.48■■□□□ 1.83
PDLIM3-203ENST00000284771 GRIK5Q16478 980 aa26.47■■□□□ 1.83
PDLIM3-203ENST00000284771 KBTBD3Q8NAB2 608 aa26.47■■□□□ 1.83
PDLIM3-203ENST00000284771 MXD3Q9BW11 206 aa26.47■■□□□ 1.83
PDLIM3-203ENST00000284771 ZNRF3Q9ULT6 936 aa26.47■■□□□ 1.83
PDLIM3-203ENST00000284771 LMNB1P20700 586 aa26.47■■□□□ 1.83
PDLIM3-203ENST00000284771 NIM1KQ8IY84 436 aa26.47■■□□□ 1.83
PDLIM3-203ENST00000284771 CERS5Q8N5B7 392 aa26.46■■□□□ 1.83
PDLIM3-203ENST00000284771 WDR66Q8TBY9 1149 aa26.46■■□□□ 1.83
PDLIM3-203ENST00000284771 JDP2Q8WYK2 163 aa26.46■■□□□ 1.83
PDLIM3-203ENST00000284771 ABCF2Q9UG63 623 aa26.46■■□□□ 1.83
PDLIM3-203ENST00000284771 SALL1Q9NSC2 1324 aa26.46■■□□□ 1.83
PDLIM3-203ENST00000284771 TTF1Q15361 905 aaPredicted RBP26.45■■□□□ 1.82
PDLIM3-203ENST00000284771 SLFNL1Q499Z3 407 aa26.45■■□□□ 1.82
PDLIM3-203ENST00000284771 DOCK2Q92608 1830 aa26.45■■□□□ 1.82
PDLIM3-203ENST00000284771 DICER1Q9UPY3 1922 aaKnown RBP26.45■■□□□ 1.82
PDLIM3-203ENST00000284771 RAD17O75943 681 aa26.44■■□□□ 1.82
PDLIM3-203ENST00000284771 PRDX5P30044 214 aa26.44■■□□□ 1.82
PDLIM3-203ENST00000284771 MFSD14BQ5SR56 506 aa26.44■■□□□ 1.82
PDLIM3-203ENST00000284771 DACT2Q5SW24 774 aa26.44■■□□□ 1.82
PDLIM3-203ENST00000284771 STRIP1Q5VSL9 837 aa26.44■■□□□ 1.82
PDLIM3-203ENST00000284771 FSD1Q9BTV5 496 aa26.44■■□□□ 1.82
PDLIM3-203ENST00000284771 USP17L3A6NCW0 530 aa26.44■■□□□ 1.82
PDLIM3-203ENST00000284771 USP17L4A6NCW7 530 aa26.44■■□□□ 1.82
PDLIM3-203ENST00000284771 GRIN3BO60391 1043 aa26.44■■□□□ 1.82
PDLIM3-203ENST00000284771 USP17L1Q7RTZ2 530 aa26.44■■□□□ 1.82
PDLIM3-203ENST00000284771 ZNF384Q8TF68 577 aa26.44■■□□□ 1.82
PDLIM3-203ENST00000284771 FBXW7Q969H0 707 aa26.44■■□□□ 1.82
PDLIM3-203ENST00000284771 PSME4Q14997 1843 aa26.44■■□□□ 1.82
PDLIM3-203ENST00000284771 FZD9O00144 591 aa26.43■■□□□ 1.82
PDLIM3-203ENST00000284771 IDH1O75874 414 aaKnown RBP26.43■■□□□ 1.82
PDLIM3-203ENST00000284771 CXCL9Q07325 125 aa26.43■■□□□ 1.82
PDLIM3-203ENST00000284771 LRP2BPQ9P2M1 347 aa26.42■■□□□ 1.82
PDLIM3-203ENST00000284771 PSMD14O00487 310 aa26.41■■□□□ 1.82
PDLIM3-203ENST00000284771 TBC1D22AQ8WUA7 517 aa26.41■■□□□ 1.82
PDLIM3-203ENST00000284771 VIL1P09327 827 aaKnown RBP26.4■■□□□ 1.82
PDLIM3-203ENST00000284771 CHMLP26374 656 aa26.4■■□□□ 1.82
PDLIM3-203ENST00000284771 SLC9C2Q5TAH2 1124 aa26.4■■□□□ 1.82
PDLIM3-203ENST00000284771 MYH7P12883 1935 aa26.39■■□□□ 1.82
PDLIM3-203ENST00000284771 C9orf131Q5VYM1 1079 aa26.39■■□□□ 1.82
PDLIM3-203ENST00000284771 ERICH6Q7L0X2 663 aa26.39■■□□□ 1.82
PDLIM3-203ENST00000284771 NSUN4Q96CB9 384 aaKnown RBP26.39■■□□□ 1.82
PDLIM3-203ENST00000284771 RNF181Q9P0P0 153 aa26.39■■□□□ 1.82
PDLIM3-203ENST00000284771 MECOMQ03112 1051 aa26.38■■□□□ 1.81
PDLIM3-203ENST00000284771 MAP3K12Q12852 859 aa26.38■■□□□ 1.81
PDLIM3-203ENST00000284771 C8orf34Q49A92 452 aa26.38■■□□□ 1.81
PDLIM3-203ENST00000284771 ZGPATQ8N5A5 531 aaKnown RBP26.38■■□□□ 1.81
PDLIM3-203ENST00000284771 IL25Q9H293 177 aa26.38■■□□□ 1.81
PDLIM3-203ENST00000284771 RAI14Q9P0K7 980 aa26.38■■□□□ 1.81
PDLIM3-203ENST00000284771 TCRBV5S4A2TA0A5A2 114 aa26.38■■□□□ 1.81
PDLIM3-203ENST00000284771 LDHBP07195 334 aaKnown RBP26.38■■□□□ 1.81
PDLIM3-203ENST00000284771 PDE6AP16499 860 aa26.38■■□□□ 1.81
PDLIM3-203ENST00000284771 ADD2P35612 726 aa26.38■■□□□ 1.81
PDLIM3-203ENST00000284771 FKBP1AP62942 108 aaKnown RBP26.38■■□□□ 1.81
PDLIM3-203ENST00000284771 MAGEB6Q8N7X4 407 aa26.38■■□□□ 1.81
PDLIM3-203ENST00000284771 FAM227BQ96M60 508 aa26.38■■□□□ 1.81
PDLIM3-203ENST00000284771 RNF113AO15541 343 aaKnown RBP26.37■■□□□ 1.81
PDLIM3-203ENST00000284771 CDC45O75419 566 aa26.37■■□□□ 1.81
PDLIM3-203ENST00000284771 CIAPIN1Q6FI81 312 aa26.37■■□□□ 1.81
PDLIM3-203ENST00000284771 ZBTB12Q9Y330 459 aaPredicted RBP26.37■■□□□ 1.81
PDLIM3-203ENST00000284771 ZNF541Q9H0D2 1346 aa26.36■■□□□ 1.81
PDLIM3-203ENST00000284771 SPTY2D1Q68D10 685 aaPredicted RBP26.36■■□□□ 1.81
PDLIM3-203ENST00000284771 RSBN1LQ6PCB5 846 aaPredicted RBP26.36■■□□□ 1.81
PDLIM3-203ENST00000284771 ADGRA1Q86SQ6 560 aa26.36■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms