RNA–Protein interactions for RNA: ENST00000282268.7

XRCC4-201, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRCC4, Length 1,696 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-201ENST00000282268 ZNF589Q86UQ0 364 aaPredicted RBP13.72□□□□□ -0.21
XRCC4-201ENST00000282268 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.72□□□□□ -0.21
XRCC4-201ENST00000282268 COL1A1P02452 1464 aaPredicted RBP13.71□□□□□ -0.21
XRCC4-201ENST00000282268 M0R2C6 588 aa13.71□□□□□ -0.21
XRCC4-201ENST00000282268 PTH1RQ03431 593 aa13.71□□□□□ -0.21
XRCC4-201ENST00000282268 LRRFIP1Q32MZ4 808 aaKnown RBP13.71□□□□□ -0.21
XRCC4-201ENST00000282268 MCMDC2Q4G0Z9 681 aa13.71□□□□□ -0.21
XRCC4-201ENST00000282268 ZC3H12CQ9C0D7 883 aaKnown RBP13.71□□□□□ -0.21
XRCC4-201ENST00000282268 RAI14Q9P0K7 980 aa13.71□□□□□ -0.21
XRCC4-201ENST00000282268 SLX4Q8IY92 1834 aa13.7□□□□□ -0.22
XRCC4-201ENST00000282268 MAP3K12Q12852 859 aa13.7□□□□□ -0.22
XRCC4-201ENST00000282268 ZMYM1Q5SVZ6 1142 aa13.7□□□□□ -0.22
XRCC4-201ENST00000282268 ZSCAN25Q6NSZ9 544 aa13.7□□□□□ -0.22
XRCC4-201ENST00000282268 MAGEB6Q8N7X4 407 aa13.7□□□□□ -0.22
XRCC4-201ENST00000282268 SGIP1Q9BQI5 828 aa13.7□□□□□ -0.22
XRCC4-201ENST00000282268 CD209Q9NNX6 404 aa13.7□□□□□ -0.22
XRCC4-201ENST00000282268 ZNF532Q9HCE3 1301 aa13.7□□□□□ -0.22
XRCC4-201ENST00000282268 ZFYP08048 801 aaPredicted RBP13.69□□□□□ -0.22
XRCC4-201ENST00000282268 PDE6AP16499 860 aa13.69□□□□□ -0.22
XRCC4-201ENST00000282268 ADD2P35612 726 aa13.69□□□□□ -0.22
XRCC4-201ENST00000282268 TGFB2P61812 414 aa13.69□□□□□ -0.22
XRCC4-201ENST00000282268 C15orf52Q6ZUT6 534 aaKnown RBP13.69□□□□□ -0.22
XRCC4-201ENST00000282268 OSBP2Q969R2 916 aa13.69□□□□□ -0.22
XRCC4-201ENST00000282268 LSG1Q9H089 658 aaKnown RBP13.69□□□□□ -0.22
XRCC4-201ENST00000282268 SPON1Q9HCB6 807 aa13.69□□□□□ -0.22
XRCC4-201ENST00000282268 PIM2Q9P1W9 311 aa13.69□□□□□ -0.22
XRCC4-201ENST00000282268 RFX7Q2KHR2 1363 aa13.69□□□□□ -0.22
XRCC4-201ENST00000282268 MAST3O60307 1309 aa13.69□□□□□ -0.22
XRCC4-201ENST00000282268 LRRC37AA6NMS7 1700 aa13.69□□□□□ -0.22
XRCC4-201ENST00000282268 AKAP11Q9UKA4 1901 aa13.69□□□□□ -0.22
XRCC4-201ENST00000282268 SEMA3EO15041 775 aa13.69□□□□□ -0.22
XRCC4-201ENST00000282268 MCCP23508 829 aa13.69□□□□□ -0.22
XRCC4-201ENST00000282268 TDRD7Q8NHU6 1098 aaKnown RBP13.69□□□□□ -0.22
XRCC4-201ENST00000282268 C7orf43Q8WVR3 580 aa13.69□□□□□ -0.22
XRCC4-201ENST00000282268 EYA3Q99504 573 aa13.69□□□□□ -0.22
XRCC4-201ENST00000282268 HELLSQ9NRZ9 838 aa13.69□□□□□ -0.22
XRCC4-201ENST00000282268 MED23Q9ULK4 1368 aa13.69□□□□□ -0.22
XRCC4-201ENST00000282268 RAD50Q92878 1312 aa13.68□□□□□ -0.22
XRCC4-201ENST00000282268 RBM25P49756 843 aaKnown RBP13.68□□□□□ -0.22
XRCC4-201ENST00000282268 PUS7LQ9H0K6 701 aaKnown RBP13.68□□□□□ -0.22
XRCC4-201ENST00000282268 CCDC171Q6TFL3 1326 aa13.68□□□□□ -0.22
XRCC4-201ENST00000282268 CYP7A1P22680 504 aa13.67□□□□□ -0.22
XRCC4-201ENST00000282268 AOC3Q16853 763 aa13.67□□□□□ -0.22
XRCC4-201ENST00000282268 CCDC93Q567U6 631 aa13.67□□□□□ -0.22
XRCC4-201ENST00000282268 DALRD3Q5D0E6 543 aaKnown RBP13.67□□□□□ -0.22
XRCC4-201ENST00000282268 ERICH6Q7L0X2 663 aa13.67□□□□□ -0.22
XRCC4-201ENST00000282268 NLGN2Q8NFZ4 835 aa13.67□□□□□ -0.22
XRCC4-201ENST00000282268 APPBP2Q92624 585 aa13.67□□□□□ -0.22
XRCC4-201ENST00000282268 DBNDD1Q9H9R9 158 aa13.67□□□□□ -0.22
XRCC4-201ENST00000282268 DUOX1Q9NRD9 1551 aa13.67□□□□□ -0.22
XRCC4-201ENST00000282268 IL1R1P14778 569 aa13.66□□□□□ -0.22
XRCC4-201ENST00000282268 GTF2IP78347 998 aa13.66□□□□□ -0.22
XRCC4-201ENST00000282268 VPS53Q5VIR6 699 aa13.66□□□□□ -0.22
XRCC4-201ENST00000282268 MIGA1Q8NAN2 632 aa13.66□□□□□ -0.22
XRCC4-201ENST00000282268 COA1Q9GZY4 146 aa13.66□□□□□ -0.22
XRCC4-201ENST00000282268 PALD1Q9ULE6 856 aa13.66□□□□□ -0.22
XRCC4-201ENST00000282268 BCS1LQ9Y276 419 aa13.66□□□□□ -0.22
XRCC4-201ENST00000282268 CD2APQ9Y5K6 639 aa13.66□□□□□ -0.22
XRCC4-201ENST00000282268 TCRBV5S4A2TA0A5A2 114 aa13.66□□□□□ -0.22
XRCC4-201ENST00000282268 PRDX5P30044 214 aa13.66□□□□□ -0.22
XRCC4-201ENST00000282268 GRIK5Q16478 980 aa13.66□□□□□ -0.22
XRCC4-201ENST00000282268 NAA16Q6N069 864 aaPredicted RBP13.66□□□□□ -0.22
XRCC4-201ENST00000282268 WDR66Q8TBY9 1149 aa13.66□□□□□ -0.22
XRCC4-201ENST00000282268 RBM8AQ9Y5S9 174 aaKnown RBP13.66□□□□□ -0.22
XRCC4-201ENST00000282268 LTBP1Q14766 1721 aa13.65□□□□□ -0.22
XRCC4-201ENST00000282268 GPAA1O43292 621 aa13.65□□□□□ -0.22
XRCC4-201ENST00000282268 PPIP5K2O43314 1243 aa13.65□□□□□ -0.22
XRCC4-201ENST00000282268 MECOMQ03112 1051 aa13.65□□□□□ -0.22
XRCC4-201ENST00000282268 UBE3CQ15386 1083 aa13.65□□□□□ -0.22
XRCC4-201ENST00000282268 CC2D2BQ6DHV5 1058 aa13.65□□□□□ -0.22
XRCC4-201ENST00000282268 DZIP1Q86YF9 867 aaKnown RBP13.65□□□□□ -0.22
XRCC4-201ENST00000282268 AIDAQ96BJ3 306 aa13.65□□□□□ -0.22
XRCC4-201ENST00000282268 MXD3Q9BW11 206 aa13.65□□□□□ -0.22
XRCC4-201ENST00000282268 ARMT1Q9H993 441 aa13.65□□□□□ -0.22
XRCC4-201ENST00000282268 KCNQ5Q9NR82 932 aa13.65□□□□□ -0.22
XRCC4-201ENST00000282268 ZNF277Q9NRM2 450 aaPredicted RBP13.65□□□□□ -0.22
XRCC4-201ENST00000282268 MYO5AQ9Y4I1 1855 aaKnown RBP13.64□□□□□ -0.23
XRCC4-201ENST00000282268 MBD4O95243 580 aa13.64□□□□□ -0.23
XRCC4-201ENST00000282268 LDHBP07195 334 aaKnown RBP13.64□□□□□ -0.23
XRCC4-201ENST00000282268 SPTY2D1Q68D10 685 aaPredicted RBP13.64□□□□□ -0.23
XRCC4-201ENST00000282268 ADGRA1Q86SQ6 560 aa13.64□□□□□ -0.23
XRCC4-201ENST00000282268 RTKN2Q8IZC4 609 aa13.64□□□□□ -0.23
XRCC4-201ENST00000282268 SUPT20HQ8NEM7 779 aa13.64□□□□□ -0.23
XRCC4-201ENST00000282268 KIF13BQ9NQT8 1826 aa13.64□□□□□ -0.23
XRCC4-201ENST00000282268 DLEC1Q9Y238 1755 aa13.64□□□□□ -0.23
XRCC4-201ENST00000282268 F8W031 263 aaPredicted RBP13.63□□□□□ -0.23
XRCC4-201ENST00000282268 ECE2O60344 883 aa13.63□□□□□ -0.23
XRCC4-201ENST00000282268 APPP05067 770 aa13.63□□□□□ -0.23
XRCC4-201ENST00000282268 HSPA4P34932 840 aa13.63□□□□□ -0.23
XRCC4-201ENST00000282268 SLC4A3P48751 1232 aa13.63□□□□□ -0.23
XRCC4-201ENST00000282268 MFSD14BQ5SR56 506 aa13.63□□□□□ -0.23
XRCC4-201ENST00000282268 MAP4K1Q92918 833 aa13.63□□□□□ -0.23
XRCC4-201ENST00000282268 KIF2CQ99661 725 aa13.63□□□□□ -0.23
XRCC4-201ENST00000282268 RTFDC1Q9BY42 306 aaPredicted RBP13.63□□□□□ -0.23
XRCC4-201ENST00000282268 PDS5AQ29RF7 1337 aaKnown RBP13.63□□□□□ -0.23
XRCC4-201ENST00000282268 HSPD1P10809 573 aaKnown RBP13.63□□□□□ -0.23
XRCC4-201ENST00000282268 DYNLL1P63167 89 aaKnown RBP13.63□□□□□ -0.23
XRCC4-201ENST00000282268 CREB3L3Q68CJ9 461 aa13.63□□□□□ -0.23
XRCC4-201ENST00000282268 TTLL5Q6EMB2 1281 aa13.63□□□□□ -0.23
XRCC4-201ENST00000282268 TICAM2Q86XR7 235 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms