RNA–Protein interactions for RNA: ENST00000278886.10

NINL-201, Transcript of ninein like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NINL, Length 4,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NINL-201ENST00000278886 USP44Q9H0E7 712 aa20.16■□□□□ 0.82
NINL-201ENST00000278886 EYA3Q99504 573 aa20.16■□□□□ 0.82
NINL-201ENST00000278886 DESP17661 470 aa20.15■□□□□ 0.82
NINL-201ENST00000278886 BRAPQ7Z569 592 aa20.15■□□□□ 0.82
NINL-201ENST00000278886 SAMM50Q9Y512 469 aa20.15■□□□□ 0.82
NINL-201ENST00000278886 NEURL1BA8MQ27 555 aa20.15■□□□□ 0.82
NINL-201ENST00000278886 CETN1Q12798 172 aa20.15■□□□□ 0.82
NINL-201ENST00000278886 RRAGBQ5VZM2 374 aa20.15■□□□□ 0.82
NINL-201ENST00000278886 PDCL2Q8N4E4 241 aa20.15■□□□□ 0.82
NINL-201ENST00000278886 C6orf50Q9HD87 102 aa20.15■□□□□ 0.82
NINL-201ENST00000278886 SNX14Q9Y5W7 946 aa20.15■□□□□ 0.82
NINL-201ENST00000278886 RIMBP2O15034 1052 aa20.15■□□□□ 0.82
NINL-201ENST00000278886 CCDC150Q8NCX0 1101 aa20.15■□□□□ 0.82
NINL-201ENST00000278886 GBP3Q9H0R5 595 aa20.15■□□□□ 0.82
NINL-201ENST00000278886 CENPHQ9H3R5 247 aa20.14■□□□□ 0.82
NINL-201ENST00000278886 ATP7BP35670 1465 aa20.14■□□□□ 0.81
NINL-201ENST00000278886 DNAJC25Q9H1X3 360 aa20.14■□□□□ 0.81
NINL-201ENST00000278886 UBASH3AP57075 661 aa20.14■□□□□ 0.81
NINL-201ENST00000278886 ZCCHC11Q5TAX3 1644 aaKnown RBP20.14■□□□□ 0.81
NINL-201ENST00000278886 RTL1A6NKG5 1358 aa20.14■□□□□ 0.81
NINL-201ENST00000278886 H0YHG0 523 aa20.14■□□□□ 0.81
NINL-201ENST00000278886 HIBADHP31937 336 aaKnown RBP20.14■□□□□ 0.81
NINL-201ENST00000278886 TMCO3Q6UWJ1 677 aa20.14■□□□□ 0.81
NINL-201ENST00000278886 SYNMO15061 1565 aa20.13■□□□□ 0.81
NINL-201ENST00000278886 XRCC6P12956 609 aaKnown RBP eCLIP20.13■□□□□ 0.81
NINL-201ENST00000278886 CETN2P41208 172 aa20.13■□□□□ 0.81
NINL-201ENST00000278886 CHMP4BP1P59074 171 aa20.13■□□□□ 0.81
NINL-201ENST00000278886 FAM98CQ17RN3 349 aaKnown RBP20.13■□□□□ 0.81
NINL-201ENST00000278886 TBCAO75347 108 aaKnown RBP20.13■□□□□ 0.81
NINL-201ENST00000278886 CCDC66A2RUB6 948 aa20.13■□□□□ 0.81
NINL-201ENST00000278886 GPAA1O43292 621 aa20.13■□□□□ 0.81
NINL-201ENST00000278886 NEFHP12036 1026 aa20.13■□□□□ 0.81
NINL-201ENST00000278886 FAM193AP78312 1265 aa20.13■□□□□ 0.81
NINL-201ENST00000278886 SSH3Q8TE77 659 aa20.13■□□□□ 0.81
NINL-201ENST00000278886 LPIN2Q92539 896 aa20.13■□□□□ 0.81
NINL-201ENST00000278886 RBM17Q96I25 401 aaKnown RBP20.13■□□□□ 0.81
NINL-201ENST00000278886 B4E1Z4 1266 aa20.12■□□□□ 0.81
NINL-201ENST00000278886 KRT2P35908 639 aa20.12■□□□□ 0.81
NINL-201ENST00000278886 ZKSCAN3Q9BRR0 538 aa20.12■□□□□ 0.81
NINL-201ENST00000278886 NLRP1Q9C000 1473 aa20.12■□□□□ 0.81
NINL-201ENST00000278886 TCIRG1Q13488 830 aa20.12■□□□□ 0.81
NINL-201ENST00000278886 RRP36Q96EU6 259 aaKnown RBP20.12■□□□□ 0.81
NINL-201ENST00000278886 GOLGA6L9A6NEM1 432 aa20.12■□□□□ 0.81
NINL-201ENST00000278886 SPAG1Q07617 926 aa20.12■□□□□ 0.81
NINL-201ENST00000278886 ROBO2Q9HCK4 1378 aa20.12■□□□□ 0.81
NINL-201ENST00000278886 CCDC102AQ96A19 550 aa20.12■□□□□ 0.81
NINL-201ENST00000278886 DHX58Q96C10 678 aa20.12■□□□□ 0.81
NINL-201ENST00000278886 TMEM87BQ96K49 555 aa20.12■□□□□ 0.81
NINL-201ENST00000278886 TYRO3Q06418 890 aa20.11■□□□□ 0.81
NINL-201ENST00000278886 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.11■□□□□ 0.814e-6■■□□□ 13.6
NINL-201ENST00000278886 SYCP3Q8IZU3 236 aa20.11■□□□□ 0.81
NINL-201ENST00000278886 AOPEPQ8N6M6 819 aa20.11■□□□□ 0.81
NINL-201ENST00000278886 ARMT1Q9H993 441 aa20.11■□□□□ 0.81
NINL-201ENST00000278886 TTC6Q86TZ1 520 aa20.11■□□□□ 0.81
NINL-201ENST00000278886 TMEM94Q12767 1356 aa20.11■□□□□ 0.81
NINL-201ENST00000278886 UFL1O94874 794 aa20.11■□□□□ 0.81
NINL-201ENST00000278886 PRDM15P57071 1507 aaPredicted RBP20.1■□□□□ 0.81
NINL-201ENST00000278886 LIG1P18858 919 aa20.1■□□□□ 0.81
NINL-201ENST00000278886 PAFAH1B1P43034 410 aa20.1■□□□□ 0.81
NINL-201ENST00000278886 TRMT2AQ8IZ69 625 aaKnown RBP20.1■□□□□ 0.81
NINL-201ENST00000278886 HECW2Q9P2P5 1572 aa20.1■□□□□ 0.81
NINL-201ENST00000278886 TAF5LO75529 589 aa20.1■□□□□ 0.81
NINL-201ENST00000278886 TSPYL1Q9H0U9 437 aa20.1■□□□□ 0.81
NINL-201ENST00000278886 NDUFB9Q9Y6M9 179 aa20.1■□□□□ 0.81
NINL-201ENST00000278886 CHD1O14646 1710 aa20.1■□□□□ 0.81
NINL-201ENST00000278886 PLA2R1Q13018 1463 aa20.1■□□□□ 0.81
NINL-201ENST00000278886 SNW1Q13573 536 aaKnown RBP20.1■□□□□ 0.81
NINL-201ENST00000278886 VEZTQ9HBM0 779 aa20.1■□□□□ 0.81
NINL-201ENST00000278886 HSP90AA4PQ58FG1 418 aa20.1■□□□□ 0.81
NINL-201ENST00000278886 ATL3Q6DD88 541 aa20.1■□□□□ 0.81
NINL-201ENST00000278886 TEX11Q8IYF3 940 aa20.1■□□□□ 0.81
NINL-201ENST00000278886 CRACR2AQ9BSW2 395 aa20.1■□□□□ 0.81
NINL-201ENST00000278886 RBM28Q9NW13 759 aaKnown RBP20.1■□□□□ 0.81
NINL-201ENST00000278886 KDRP35968 1356 aa20.09■□□□□ 0.81
NINL-201ENST00000278886 PSMA7O14818 248 aa20.09■□□□□ 0.81
NINL-201ENST00000278886 TRIM21P19474 475 aaKnown RBP20.09■□□□□ 0.81
NINL-201ENST00000278886 SMARCC2Q8TAQ2 1214 aa20.09■□□□□ 0.81
NINL-201ENST00000278886 IGSF1Q8N6C5 1336 aa20.09■□□□□ 0.81
NINL-201ENST00000278886 GNA11P29992 359 aa20.09■□□□□ 0.81
NINL-201ENST00000278886 DNA2P51530 1060 aa20.09■□□□□ 0.81
NINL-201ENST00000278886 ASIC1P78348 528 aa20.09■□□□□ 0.81
NINL-201ENST00000278886 CTAGE1Q96RT6 745 aa20.09■□□□□ 0.81
NINL-201ENST00000278886 ATP5JP18859 108 aa20.09■□□□□ 0.81
NINL-201ENST00000278886 IBSPP21815 317 aaPredicted RBP20.09■□□□□ 0.81
NINL-201ENST00000278886 ANGEL1Q9UNK9 670 aaKnown RBP20.08■□□□□ 0.81
NINL-201ENST00000278886 USP6P35125 1406 aa20.08■□□□□ 0.81
NINL-201ENST00000278886 CCDC186Q7Z3E2 898 aa20.08■□□□□ 0.81
NINL-201ENST00000278886 TNNI2P48788 182 aa20.08■□□□□ 0.8
NINL-201ENST00000278886 BEND3Q5T5X7 828 aa20.08■□□□□ 0.8
NINL-201ENST00000278886 ARHGEF25Q86VW2 580 aa20.08■□□□□ 0.8
NINL-201ENST00000278886 SEPT7Q16181 437 aaKnown RBP20.08■□□□□ 0.8
NINL-201ENST00000278886 LLPHQ9BRT6 129 aaKnown RBP20.07■□□□□ 0.8
NINL-201ENST00000278886 MROH5Q6ZUA9 1318 aa20.07■□□□□ 0.8
NINL-201ENST00000278886 TMX1Q9H3N1 280 aa20.07■□□□□ 0.8
NINL-201ENST00000278886 ERBB4Q15303 1308 aa20.07■□□□□ 0.8
NINL-201ENST00000278886 CLASP1Q7Z460 1538 aa20.07■□□□□ 0.8
NINL-201ENST00000278886 ZAP70P43403 619 aa20.07■□□□□ 0.8
NINL-201ENST00000278886 PRR36Q9H6K5 1346 aa20.07■□□□□ 0.8
NINL-201ENST00000278886 HSPA4P34932 840 aa20.06■□□□□ 0.8
NINL-201ENST00000278886 KRT79Q5XKE5 535 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms