RNA–Protein interactions for RNA: ENST00000276585.8

MRPS28-201, Transcript of mitochondrial ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPS28, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-201ENST00000276585 G2E3Q7L622 706 aa15.78■□□□□ 0.12
MRPS28-201ENST00000276585 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.78■□□□□ 0.12
MRPS28-201ENST00000276585 FBXW7Q969H0 707 aa15.78■□□□□ 0.12
MRPS28-201ENST00000276585 PPP1R12BO60237 982 aaPredicted RBP15.77■□□□□ 0.12
MRPS28-201ENST00000276585 RPS8P62241 208 aaKnown RBP15.77■□□□□ 0.12
MRPS28-201ENST00000276585 RIC3Q7Z5B4 369 aa15.77■□□□□ 0.12
MRPS28-201ENST00000276585 NKX2-3Q8TAU0 364 aa15.77■□□□□ 0.12
MRPS28-201ENST00000276585 FAM89AQ96GI7 184 aa15.77■□□□□ 0.12
MRPS28-201ENST00000276585 PTPN18Q99952 460 aa15.77■□□□□ 0.12
MRPS28-201ENST00000276585 PODXL2Q9NZ53 605 aa15.77■□□□□ 0.12
MRPS28-201ENST00000276585 STAP2Q9UGK3 403 aa15.77■□□□□ 0.12
MRPS28-201ENST00000276585 MTFR1Q15390 333 aa15.76■□□□□ 0.11
MRPS28-201ENST00000276585 SF3B3Q15393 1217 aaKnown RBP15.76■□□□□ 0.11
MRPS28-201ENST00000276585 TAF1CQ15572 869 aaPredicted RBP15.76■□□□□ 0.11
MRPS28-201ENST00000276585 MYD88Q99836 296 aa15.76■□□□□ 0.11
MRPS28-201ENST00000276585 MXD3Q9BW11 206 aa15.76■□□□□ 0.11
MRPS28-201ENST00000276585 ZFYVE28Q9HCC9 887 aa15.76■□□□□ 0.11
MRPS28-201ENST00000276585 IGKV5-2P06315 115 aa15.75■□□□□ 0.11
MRPS28-201ENST00000276585 EXOSC9Q06265 439 aaKnown RBP15.75■□□□□ 0.11
MRPS28-201ENST00000276585 KIF22Q14807 665 aa15.75■□□□□ 0.11
MRPS28-201ENST00000276585 MAP3K11Q16584 847 aa15.75■□□□□ 0.11
MRPS28-201ENST00000276585 GPR153Q6NV75 609 aa15.75■□□□□ 0.11
MRPS28-201ENST00000276585 PODNQ7Z5L7 613 aa15.75■□□□□ 0.11
MRPS28-201ENST00000276585 METTL22Q9BUU2 404 aaPredicted RBP15.75■□□□□ 0.11
MRPS28-201ENST00000276585 RNF39Q9H2S5 420 aa15.75■□□□□ 0.11
MRPS28-201ENST00000276585 PRDM6Q9NQX0 595 aa15.75■□□□□ 0.11
MRPS28-201ENST00000276585 PSME4Q14997 1843 aa15.74■□□□□ 0.11
MRPS28-201ENST00000276585 EVI5O60447 810 aa15.74■□□□□ 0.11
MRPS28-201ENST00000276585 VAMP4O75379 141 aa15.74■□□□□ 0.11
MRPS28-201ENST00000276585 GJA5P36382 358 aa15.74■□□□□ 0.11
MRPS28-201ENST00000276585 RTL5Q5HYW3 569 aaPredicted RBP15.74■□□□□ 0.11
MRPS28-201ENST00000276585 MAP3K2Q9Y2U5 619 aa15.74■□□□□ 0.11
MRPS28-201ENST00000276585 TESPA1A2RU30 521 aaPredicted RBP15.73■□□□□ 0.11
MRPS28-201ENST00000276585 PI4KAP2A4QPH2 592 aa15.73■□□□□ 0.11
MRPS28-201ENST00000276585 IRS4O14654 1257 aaPredicted RBP15.73■□□□□ 0.11
MRPS28-201ENST00000276585 KSR2Q6VAB6 950 aa15.73■□□□□ 0.11
MRPS28-201ENST00000276585 PI4KAP1Q8N8J0 262 aa15.73■□□□□ 0.11
MRPS28-201ENST00000276585 ZBTB38Q8NAP3 1195 aaPredicted RBP15.73■□□□□ 0.11
MRPS28-201ENST00000276585 CCDC191Q8NCU4 936 aa15.73■□□□□ 0.11
MRPS28-201ENST00000276585 DEFB129Q9H1M3 183 aa15.73■□□□□ 0.11
MRPS28-201ENST00000276585 VCANP13611 3396 aa15.72■□□□□ 0.11
MRPS28-201ENST00000276585 PCCAP05165 728 aaPredicted RBP15.72■□□□□ 0.11
MRPS28-201ENST00000276585 IREB2P48200 963 aaKnown RBP15.72■□□□□ 0.11
MRPS28-201ENST00000276585 UBE2Q1Q7Z7E8 422 aa15.72■□□□□ 0.11
MRPS28-201ENST00000276585 STK31Q9BXU1 1019 aa15.72■□□□□ 0.11
MRPS28-201ENST00000276585 CHMP4AQ9BY43 222 aa15.72■□□□□ 0.11
MRPS28-201ENST00000276585 ARHGAP39Q9C0H5 1083 aa15.72■□□□□ 0.11
MRPS28-201ENST00000276585 MTMR10Q9NXD2 777 aa15.72■□□□□ 0.11
MRPS28-201ENST00000276585 A0A1B0GUL6 1792 aa15.72■□□□□ 0.11
MRPS28-201ENST00000276585 COL1A1P02452 1464 aaPredicted RBP15.71■□□□□ 0.11
MRPS28-201ENST00000276585 MYO3BQ8WXR4 1341 aa15.71■□□□□ 0.11
MRPS28-201ENST00000276585 UNCXA6NJT0 531 aa15.71■□□□□ 0.11
MRPS28-201ENST00000276585 ECM2O94769 699 aaPredicted RBP15.71■□□□□ 0.11
MRPS28-201ENST00000276585 FARP2O94887 1054 aaPredicted RBP15.71■□□□□ 0.11
MRPS28-201ENST00000276585 DDX58O95786 925 aaKnown RBP15.71■□□□□ 0.11
MRPS28-201ENST00000276585 SLC4A2P04920 1241 aa15.71■□□□□ 0.11
MRPS28-201ENST00000276585 GJA8P48165 433 aa15.71■□□□□ 0.11
MRPS28-201ENST00000276585 FLIIQ13045 1269 aa15.71■□□□□ 0.11
MRPS28-201ENST00000276585 DACT2Q5SW24 774 aa15.71■□□□□ 0.11
MRPS28-201ENST00000276585 JARID2Q92833 1246 aaPredicted RBP15.71■□□□□ 0.11
MRPS28-201ENST00000276585 CWC25Q9NXE8 425 aaPredicted RBP15.71■□□□□ 0.11
MRPS28-201ENST00000276585 LAMB1P07942 1786 aa15.7■□□□□ 0.1
MRPS28-201ENST00000276585 WDHD1O75717 1129 aaPredicted RBP15.7■□□□□ 0.1
MRPS28-201ENST00000276585 PRMT2P55345 433 aa15.7■□□□□ 0.1
MRPS28-201ENST00000276585 CWF19L2Q2TBE0 894 aaKnown RBP15.7■□□□□ 0.1
MRPS28-201ENST00000276585 OPTNQ96CV9 577 aa15.7■□□□□ 0.1
MRPS28-201ENST00000276585 SEC31BQ9NQW1 1179 aa15.7■□□□□ 0.1
MRPS28-201ENST00000276585 SSC5DA1L4H1 1573 aa15.7■□□□□ 0.1
MRPS28-201ENST00000276585 XDHP47989 1333 aa15.69■□□□□ 0.1
MRPS28-201ENST00000276585 ZNF646O15015 1829 aaPredicted RBP15.69■□□□□ 0.1
MRPS28-201ENST00000276585 CCL15-CCL14A0A0B4J2E2 113 aa15.69■□□□□ 0.1
MRPS28-201ENST00000276585 NEURL1BA8MQ27 555 aa15.69■□□□□ 0.1
MRPS28-201ENST00000276585 GJB1P08034 283 aa15.69■□□□□ 0.1
MRPS28-201ENST00000276585 CCL5P13501 91 aa15.69■□□□□ 0.1
MRPS28-201ENST00000276585 CCL15Q16663 113 aa15.69■□□□□ 0.1
MRPS28-201ENST00000276585 SUPT20HL1Q3ZLR7 823 aa15.69■□□□□ 0.1
MRPS28-201ENST00000276585 ANKRD13AQ8IZ07 590 aa15.69■□□□□ 0.1
MRPS28-201ENST00000276585 RNF208Q9H0X6 261 aa15.69■□□□□ 0.1
MRPS28-201ENST00000276585 ELP3Q9H9T3 547 aa15.69■□□□□ 0.1
MRPS28-201ENST00000276585 BIN2Q9UBW5 565 aaPredicted RBP15.69■□□□□ 0.1
MRPS28-201ENST00000276585 GNRH1P01148 92 aa15.68■□□□□ 0.1
MRPS28-201ENST00000276585 ATP2B4P23634 1241 aa15.68■□□□□ 0.1
MRPS28-201ENST00000276585 MMP14P50281 582 aa15.68■□□□□ 0.1
MRPS28-201ENST00000276585 LACTBP83111 547 aaPredicted RBP15.68■□□□□ 0.1
MRPS28-201ENST00000276585 KIAA0825Q8IV33 1275 aa15.68■□□□□ 0.1
MRPS28-201ENST00000276585 BRI3BPQ8WY22 251 aa15.68■□□□□ 0.1
MRPS28-201ENST00000276585 MYH16Q9H6N6 1097 aa15.68■□□□□ 0.1
MRPS28-201ENST00000276585 PPP2R3BQ9Y5P8 575 aa15.68■□□□□ 0.1
MRPS28-201ENST00000276585 COL9A1P20849 921 aa15.67■□□□□ 0.1
MRPS28-201ENST00000276585 GRK4P32298 578 aa15.67■□□□□ 0.1
MRPS28-201ENST00000276585 CASP7P55210 303 aa15.67■□□□□ 0.1
MRPS28-201ENST00000276585 STRIP1Q5VSL9 837 aa15.67■□□□□ 0.1
MRPS28-201ENST00000276585 RAET1EQ8TD07 263 aa15.67■□□□□ 0.1
MRPS28-201ENST00000276585 MS4A4AQ96JQ5 239 aa15.67■□□□□ 0.1
MRPS28-201ENST00000276585 ZSWIM8A7E2V4 1837 aa15.66■□□□□ 0.1
MRPS28-201ENST00000276585 CCER2I3L3R5 266 aa15.66■□□□□ 0.1
MRPS28-201ENST00000276585 PDE8AO60658 829 aa15.66■□□□□ 0.1
MRPS28-201ENST00000276585 USP2O75604 605 aaPredicted RBP15.66■□□□□ 0.1
MRPS28-201ENST00000276585 UBXN2AP68543 259 aa15.66■□□□□ 0.1
MRPS28-201ENST00000276585 FKBP5Q13451 457 aaPredicted RBP15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms