RNA–Protein interactions for RNA: ENST00000274327.11

TRIM23-202, Transcript of tripartite motif containing 23, humanhuman

TSL 1 (best) BASIC

Gene TRIM23, Length 1,829 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-202ENST00000274327 IDH1O75874 414 aaKnown RBP17.4■□□□□ 0.38
TRIM23-202ENST00000274327 ZKSCAN1P17029 563 aaPredicted RBP17.4■□□□□ 0.38
TRIM23-202ENST00000274327 MCM2P49736 904 aa17.4■□□□□ 0.38
TRIM23-202ENST00000274327 SLC9C2Q5TAH2 1124 aa17.4■□□□□ 0.38
TRIM23-202ENST00000274327 VPS53Q5VIR6 699 aa17.4■□□□□ 0.38
TRIM23-202ENST00000274327 RNF20Q5VTR2 975 aa17.4■□□□□ 0.38
TRIM23-202ENST00000274327 C15orf52Q6ZUT6 534 aaKnown RBP17.4■□□□□ 0.38
TRIM23-202ENST00000274327 TMC4Q7Z404 712 aa17.4■□□□□ 0.38
TRIM23-202ENST00000274327 PUS7LQ9H0K6 701 aaKnown RBP17.4■□□□□ 0.38
TRIM23-202ENST00000274327 DENND2AQ9ULE3 1009 aa17.4■□□□□ 0.38
TRIM23-202ENST00000274327 RPAP1Q9BWH6 1393 aaPredicted RBP17.4■□□□□ 0.38
TRIM23-202ENST00000274327 SRGNP10124 158 aa17.4■□□□□ 0.38
TRIM23-202ENST00000274327 HSPD1P10809 573 aaKnown RBP17.4■□□□□ 0.38
TRIM23-202ENST00000274327 HIBADHP31937 336 aaKnown RBP17.4■□□□□ 0.38
TRIM23-202ENST00000274327 PDE6BP35913 854 aa17.4■□□□□ 0.38
TRIM23-202ENST00000274327 GPSM2P81274 684 aa17.4■□□□□ 0.38
TRIM23-202ENST00000274327 MAP3K12Q12852 859 aa17.4■□□□□ 0.38
TRIM23-202ENST00000274327 TTC14Q96N46 770 aa17.4■□□□□ 0.38
TRIM23-202ENST00000274327 ZNF532Q9HCE3 1301 aa17.39■□□□□ 0.37
TRIM23-202ENST00000274327 NPR1P16066 1061 aa17.39■□□□□ 0.37
TRIM23-202ENST00000274327 ADCK5Q3MIX3 580 aa17.39■□□□□ 0.37
TRIM23-202ENST00000274327 VPS37DQ86XT2 251 aa17.39■□□□□ 0.37
TRIM23-202ENST00000274327 UPF3BQ9BZI7 483 aaKnown RBP17.39■□□□□ 0.37
TRIM23-202ENST00000274327 ZSWIM6Q9HCJ5 1215 aa17.39■□□□□ 0.37
TRIM23-202ENST00000274327 PODXL2Q9NZ53 605 aa17.39■□□□□ 0.37
TRIM23-202ENST00000274327 ANKIB1Q9P2G1 1089 aa17.39■□□□□ 0.37
TRIM23-202ENST00000274327 ATP2B4P23634 1241 aa17.38■□□□□ 0.37
TRIM23-202ENST00000274327 TXNRD3Q86VQ6 643 aa17.38■□□□□ 0.37
TRIM23-202ENST00000274327 SLKQ9H2G2 1235 aaPredicted RBP17.38■□□□□ 0.37
TRIM23-202ENST00000274327 IQSEC3Q9UPP2 1182 aaPredicted RBP17.38■□□□□ 0.37
TRIM23-202ENST00000274327 FOXP2O15409 715 aa17.37■□□□□ 0.37
TRIM23-202ENST00000274327 GPAA1O43292 621 aa17.37■□□□□ 0.37
TRIM23-202ENST00000274327 DDIT3P35638 169 aa17.37■□□□□ 0.37
TRIM23-202ENST00000274327 CCDC125Q86Z20 511 aa17.37■□□□□ 0.37
TRIM23-202ENST00000274327 SP8Q8IXZ3 490 aa17.37■□□□□ 0.37
TRIM23-202ENST00000274327 SPRYD3Q8NCJ5 442 aa17.37■□□□□ 0.37
TRIM23-202ENST00000274327 JAKMIP1Q96N16 626 aaKnown RBP17.37■□□□□ 0.37
TRIM23-202ENST00000274327 CACNA1SQ13698 1873 aa17.37■□□□□ 0.37
TRIM23-202ENST00000274327 PPEF1O14829 653 aaPredicted RBP17.37■□□□□ 0.37
TRIM23-202ENST00000274327 CASTP20810 708 aaKnown RBP17.37■□□□□ 0.37
TRIM23-202ENST00000274327 MAGEB6Q8N7X4 407 aa17.37■□□□□ 0.37
TRIM23-202ENST00000274327 TAF6LQ9Y6J9 622 aa17.37■□□□□ 0.37
TRIM23-202ENST00000274327 LAMA4Q16363 1823 aa17.36■□□□□ 0.37
TRIM23-202ENST00000274327 CYP21A2P08686 494 aa17.36■□□□□ 0.37
TRIM23-202ENST00000274327 MASTLQ96GX5 879 aa17.36■□□□□ 0.37
TRIM23-202ENST00000274327 PSMA5P28066 241 aa17.35■□□□□ 0.37
TRIM23-202ENST00000274327 ALDH1B1P30837 517 aa17.35■□□□□ 0.37
TRIM23-202ENST00000274327 KRT32Q14532 448 aa17.35■□□□□ 0.37
TRIM23-202ENST00000274327 RUFY3Q7L099 469 aa17.35■□□□□ 0.37
TRIM23-202ENST00000274327 GGA1Q9UJY5 639 aa17.35■□□□□ 0.37
TRIM23-202ENST00000274327 ATP6V0A2Q9Y487 856 aa17.35■□□□□ 0.37
TRIM23-202ENST00000274327 MAST2Q6P0Q8 1798 aa17.35■□□□□ 0.37
TRIM23-202ENST00000274327 LRP2BPQ9P2M1 347 aa17.35■□□□□ 0.37
TRIM23-202ENST00000274327 NSFL1CQ9UNZ2 370 aaKnown RBP17.35■□□□□ 0.37
TRIM23-202ENST00000274327 CYP46A1Q9Y6A2 500 aa17.35■□□□□ 0.37
TRIM23-202ENST00000274327 UFL1O94874 794 aa17.34■□□□□ 0.37
TRIM23-202ENST00000274327 TDRD7Q8NHU6 1098 aaKnown RBP17.34■□□□□ 0.37
TRIM23-202ENST00000274327 TMX3Q96JJ7 454 aa17.34■□□□□ 0.37
TRIM23-202ENST00000274327 CCDC88AQ3V6T2 1871 aa17.34■□□□□ 0.37
TRIM23-202ENST00000274327 CPA1P15085 419 aa17.33■□□□□ 0.37
TRIM23-202ENST00000274327 AK2P54819 239 aa17.33■□□□□ 0.37
TRIM23-202ENST00000274327 CUL4AQ13619 759 aa17.33■□□□□ 0.37
TRIM23-202ENST00000274327 TBC1D16Q8TBP0 767 aa17.33■□□□□ 0.37
TRIM23-202ENST00000274327 STRBPQ96SI9 672 aaKnown RBP17.33■□□□□ 0.37
TRIM23-202ENST00000274327 PDGFDQ9GZP0 370 aaPredicted RBP17.33■□□□□ 0.37
TRIM23-202ENST00000274327 ALDH8A1Q9H2A2 487 aaPredicted RBP17.33■□□□□ 0.37
TRIM23-202ENST00000274327 KIAA1551Q9HCM1 1747 aa17.33■□□□□ 0.36
TRIM23-202ENST00000274327 DUOX1Q9NRD9 1551 aa17.33■□□□□ 0.36
TRIM23-202ENST00000274327 STYK1Q6J9G0 422 aa17.33■□□□□ 0.36
TRIM23-202ENST00000274327 ZNF804AQ7Z570 1209 aa17.33■□□□□ 0.36
TRIM23-202ENST00000274327 C2CD5Q86YS7 1000 aa17.33■□□□□ 0.36
TRIM23-202ENST00000274327 PDRG1Q9NUG6 133 aa17.33■□□□□ 0.36
TRIM23-202ENST00000274327 CHMP5Q9NZZ3 219 aa17.33■□□□□ 0.36
TRIM23-202ENST00000274327 ABCF2Q9UG63 623 aa17.33■□□□□ 0.36
TRIM23-202ENST00000274327 POLLQ9UGP5 575 aa17.33■□□□□ 0.36
TRIM23-202ENST00000274327 CTNNA3Q9UI47 895 aa17.33■□□□□ 0.36
TRIM23-202ENST00000274327 SALL1Q9NSC2 1324 aa17.32■□□□□ 0.36
TRIM23-202ENST00000274327 FRAT2O75474 233 aaPredicted RBP17.32■□□□□ 0.36
TRIM23-202ENST00000274327 FGAP02671 866 aa17.32■□□□□ 0.36
TRIM23-202ENST00000274327 RPS6KB1P23443 525 aa17.32■□□□□ 0.36
TRIM23-202ENST00000274327 BLOC1S2Q6QNY1 142 aa17.32■□□□□ 0.36
TRIM23-202ENST00000274327 STOX1Q6ZVD7 989 aa17.32■□□□□ 0.36
TRIM23-202ENST00000274327 SLC16A10Q8TF71 515 aa17.32■□□□□ 0.36
TRIM23-202ENST00000274327 AIDAQ96BJ3 306 aa17.32■□□□□ 0.36
TRIM23-202ENST00000274327 GPR101Q96P66 508 aaPredicted RBP17.32■□□□□ 0.36
TRIM23-202ENST00000274327 CIZ1Q9ULV3 898 aaPredicted RBP17.32■□□□□ 0.36
TRIM23-202ENST00000274327 A0A0G2JLW4 131 aa17.31■□□□□ 0.36
TRIM23-202ENST00000274327 IGSF3O75054 1194 aa17.31■□□□□ 0.36
TRIM23-202ENST00000274327 HSP90AA1P07900 732 aaKnown RBP17.31■□□□□ 0.36
TRIM23-202ENST00000274327 COL9A3Q14050 684 aaPredicted RBP17.31■□□□□ 0.36
TRIM23-202ENST00000274327 NEK1Q96PY6 1258 aa17.31■□□□□ 0.36
TRIM23-202ENST00000274327 RAI14Q9P0K7 980 aa17.31■□□□□ 0.36
TRIM23-202ENST00000274327 DLEC1Q9Y238 1755 aa17.31■□□□□ 0.36
TRIM23-202ENST00000274327 MBD4O95243 580 aa17.31■□□□□ 0.36
TRIM23-202ENST00000274327 CYP7A1P22680 504 aa17.31■□□□□ 0.36
TRIM23-202ENST00000274327 ALX1Q15699 326 aa17.31■□□□□ 0.36
TRIM23-202ENST00000274327 TTLL5Q6EMB2 1281 aa17.31■□□□□ 0.36
TRIM23-202ENST00000274327 TMED8Q6PL24 325 aaPredicted RBP17.31■□□□□ 0.36
TRIM23-202ENST00000274327 ZMYM6O95789 1325 aa17.3■□□□□ 0.36
TRIM23-202ENST00000274327 C10orf71Q711Q0 1435 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms