RNA–Protein interactions for RNA: ENST00000272602.6

CNGA3-201, Transcript of cyclic nucleotide gated channel alpha 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNGA3, Length 3,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA3-201ENST00000272602 CCZ1BP86790 482 aa12.54□□□□□ -0.4
CNGA3-201ENST00000272602 CCZ1P86791 482 aaPredicted RBP12.54□□□□□ -0.4
CNGA3-201ENST00000272602 FAM196AQ6ZSG2 479 aa12.54□□□□□ -0.4
CNGA3-201ENST00000272602 GPATCH11Q8N954 259 aa12.54□□□□□ -0.4
CNGA3-201ENST00000272602 PI4K2BQ8TCG2 481 aa12.54□□□□□ -0.4
CNGA3-201ENST00000272602 PPP1R13BQ96KQ4 1090 aa12.54□□□□□ -0.4
CNGA3-201ENST00000272602 ZSWIM6Q9HCJ5 1215 aa12.54□□□□□ -0.4
CNGA3-201ENST00000272602 FKBP4Q02790 459 aaKnown RBP eCLIP12.53□□□□□ -0.4
CNGA3-201ENST00000272602 GOLGA8FQ08AF8 430 aa12.53□□□□□ -0.4
CNGA3-201ENST00000272602 GOLGA8DPQ0D2H9 430 aa12.53□□□□□ -0.4
CNGA3-201ENST00000272602 MTMR7Q9Y216 660 aa12.53□□□□□ -0.4
CNGA3-201ENST00000272602 FHOD1Q9Y613 1164 aa12.53□□□□□ -0.4
CNGA3-201ENST00000272602 A0A1B0GVL5 298 aa12.53□□□□□ -0.4
CNGA3-201ENST00000272602 PHACTR2O75167 634 aa12.53□□□□□ -0.4
CNGA3-201ENST00000272602 ST3GAL1Q11201 340 aa12.53□□□□□ -0.4
CNGA3-201ENST00000272602 NMIQ13287 307 aaPredicted RBP12.53□□□□□ -0.4
CNGA3-201ENST00000272602 SMC1AQ14683 1233 aaKnown RBP12.53□□□□□ -0.4
CNGA3-201ENST00000272602 ANKRD1Q15327 319 aa12.53□□□□□ -0.4
CNGA3-201ENST00000272602 CFAP100Q494V2 611 aa12.53□□□□□ -0.4
CNGA3-201ENST00000272602 HSP90AB3PQ58FF7 597 aa12.53□□□□□ -0.4
CNGA3-201ENST00000272602 UTP14AQ9BVJ6 771 aaKnown RBP12.53□□□□□ -0.4
CNGA3-201ENST00000272602 ECHDC1Q9NTX5 307 aa12.53□□□□□ -0.4
CNGA3-201ENST00000272602 ADAMTSL3P82987 1691 aa12.53□□□□□ -0.4
CNGA3-201ENST00000272602 SALL3Q9BXA9 1300 aa12.53□□□□□ -0.4
CNGA3-201ENST00000272602 GNG11P61952 73 aa12.53□□□□□ -0.4
CNGA3-201ENST00000272602 ATG3Q9NT62 314 aa12.53□□□□□ -0.4
CNGA3-201ENST00000272602 MAP2P11137 1827 aaKnown RBP12.52□□□□□ -0.4
CNGA3-201ENST00000272602 ANKARQ7Z5J8 1434 aa12.52□□□□□ -0.4
CNGA3-201ENST00000272602 AATKQ6ZMQ8 1374 aa12.52□□□□□ -0.4
CNGA3-201ENST00000272602 MYO1CO00159 1063 aa12.52□□□□□ -0.4
CNGA3-201ENST00000272602 CAVIN2O95810 425 aa12.52□□□□□ -0.4
CNGA3-201ENST00000272602 HLFQ16534 295 aa12.52□□□□□ -0.4
CNGA3-201ENST00000272602 TTLL5Q6EMB2 1281 aa12.52□□□□□ -0.4
CNGA3-201ENST00000272602 VPS37DQ86XT2 251 aa12.52□□□□□ -0.4
CNGA3-201ENST00000272602 ZNF622Q969S3 477 aaKnown RBP eCLIP12.52□□□□□ -0.4
CNGA3-201ENST00000272602 ARFGAP3Q9NP61 516 aa12.52□□□□□ -0.4
CNGA3-201ENST00000272602 ATF5Q9Y2D1 282 aaPredicted RBP12.52□□□□□ -0.4
CNGA3-201ENST00000272602 OVOS2A0A0J9YW53 1432 aa12.52□□□□□ -0.41
CNGA3-201ENST00000272602 OVOS2Q6IE36 1432 aa12.52□□□□□ -0.41
CNGA3-201ENST00000272602 ELP1O95163 1332 aa12.52□□□□□ -0.41
CNGA3-201ENST00000272602 IQCB1Q15051 598 aa12.52□□□□□ -0.41
CNGA3-201ENST00000272602 HSP90AB4PQ58FF6 505 aa12.52□□□□□ -0.41
CNGA3-201ENST00000272602 KNDC1Q76NI1 1749 aa12.52□□□□□ -0.41
CNGA3-201ENST00000272602 DLC1Q96QB1 1528 aa12.52□□□□□ -0.41
CNGA3-201ENST00000272602 STK38Q15208 465 aa12.52□□□□□ -0.41
CNGA3-201ENST00000272602 E4F1Q66K89 784 aaPredicted RBP12.52□□□□□ -0.41
CNGA3-201ENST00000272602 SLC27A2O14975 620 aa12.51□□□□□ -0.41
CNGA3-201ENST00000272602 CCDC57Q2TAC2 916 aa12.51□□□□□ -0.41
CNGA3-201ENST00000272602 SAMD1Q6SPF0 538 aaPredicted RBP12.51□□□□□ -0.41
CNGA3-201ENST00000272602 KIAA1210Q9ULL0 1709 aa12.51□□□□□ -0.41
CNGA3-201ENST00000272602 VPS18Q9P253 973 aa12.51□□□□□ -0.41
CNGA3-201ENST00000272602 TAF6LQ9Y6J9 622 aa12.51□□□□□ -0.41
CNGA3-201ENST00000272602 CTAGE5O15320 804 aa12.5□□□□□ -0.41
CNGA3-201ENST00000272602 ETF1P62495 437 aaKnown RBP12.5□□□□□ -0.41
CNGA3-201ENST00000272602 SLFNL1Q499Z3 407 aa12.5□□□□□ -0.41
CNGA3-201ENST00000272602 NBPF5PQ86XG9 351 aaPredicted RBP12.5□□□□□ -0.41
CNGA3-201ENST00000272602 TAF5LO75529 589 aa12.5□□□□□ -0.41
CNGA3-201ENST00000272602 POLR3DP05423 398 aaPredicted RBP12.5□□□□□ -0.41
CNGA3-201ENST00000272602 USPL1Q5W0Q7 1092 aa12.5□□□□□ -0.41
CNGA3-201ENST00000272602 MPHOSPH8Q99549 860 aa12.5□□□□□ -0.41
CNGA3-201ENST00000272602 LCMT1Q9UIC8 334 aa12.5□□□□□ -0.41
CNGA3-201ENST00000272602 NRXN3Q9Y4C0 1643 aa12.5□□□□□ -0.41
CNGA3-201ENST00000272602 CRKLP46109 303 aaKnown RBP12.5□□□□□ -0.41
CNGA3-201ENST00000272602 TIMM10P62072 90 aa12.5□□□□□ -0.41
CNGA3-201ENST00000272602 NOM1Q5C9Z4 860 aaKnown RBP12.5□□□□□ -0.41
CNGA3-201ENST00000272602 SSH3Q8TE77 659 aa12.5□□□□□ -0.41
CNGA3-201ENST00000272602 CCDC102AQ96A19 550 aa12.5□□□□□ -0.41
CNGA3-201ENST00000272602 ORC3Q9UBD5 711 aaPredicted RBP12.5□□□□□ -0.41
CNGA3-201ENST00000272602 NEURL4Q96JN8 1562 aa12.5□□□□□ -0.41
CNGA3-201ENST00000272602 H2AFXP16104 143 aaPredicted RBP12.49□□□□□ -0.41
CNGA3-201ENST00000272602 Q6ZUG5 572 aa12.49□□□□□ -0.41
CNGA3-201ENST00000272602 CCDC150Q8NCX0 1101 aa12.49□□□□□ -0.41
CNGA3-201ENST00000272602 EDC3Q96F86 508 aaKnown RBP12.49□□□□□ -0.41
CNGA3-201ENST00000272602 DRC1Q96MC2 740 aa12.49□□□□□ -0.41
CNGA3-201ENST00000272602 USP28Q96RU2 1077 aa12.49□□□□□ -0.41
CNGA3-201ENST00000272602 BICC1Q9H694 974 aaKnown RBP12.49□□□□□ -0.41
CNGA3-201ENST00000272602 RTCBQ9Y3I0 505 aaKnown RBP12.49□□□□□ -0.41
CNGA3-201ENST00000272602 CDC25BP30305 580 aa12.49□□□□□ -0.41
CNGA3-201ENST00000272602 APPP05067 770 aa12.49□□□□□ -0.41
CNGA3-201ENST00000272602 KSR2Q6VAB6 950 aa12.49□□□□□ -0.41
CNGA3-201ENST00000272602 CREBRFQ8IUR6 639 aa12.49□□□□□ -0.41
CNGA3-201ENST00000272602 EVI5LQ96CN4 794 aa12.49□□□□□ -0.41
CNGA3-201ENST00000272602 DDX21Q9NR30 783 aaKnown RBP eCLIP12.49□□□□□ -0.41
CNGA3-201ENST00000272602 ABCF2Q9UG63 623 aa12.49□□□□□ -0.41
CNGA3-201ENST00000272602 JCADQ9P266 1359 aa12.48□□□□□ -0.41
CNGA3-201ENST00000272602 TULP2O00295 520 aa12.48□□□□□ -0.41
CNGA3-201ENST00000272602 RAD21O60216 631 aa12.48□□□□□ -0.41
CNGA3-201ENST00000272602 CASQ1P31415 396 aa12.48□□□□□ -0.41
CNGA3-201ENST00000272602 KARSQ15046 597 aaKnown RBP12.48□□□□□ -0.41
CNGA3-201ENST00000272602 DPCR1Q3MIW9 517 aa12.48□□□□□ -0.41
CNGA3-201ENST00000272602 ZBTB7AO95365 584 aa12.48□□□□□ -0.41
CNGA3-201ENST00000272602 RPS6KB1P23443 525 aa12.48□□□□□ -0.41
CNGA3-201ENST00000272602 OTUD7BQ6GQQ9 843 aa12.48□□□□□ -0.41
CNGA3-201ENST00000272602 RAB11FIP4Q86YS3 637 aa12.48□□□□□ -0.41
CNGA3-201ENST00000272602 ZNF396Q96N95 335 aaPredicted RBP12.48□□□□□ -0.41
CNGA3-201ENST00000272602 TM6SF1Q9BZW5 370 aa12.48□□□□□ -0.41
CNGA3-201ENST00000272602 A0A0D9SFI3 127 aa12.47□□□□□ -0.41
CNGA3-201ENST00000272602 NBPF26B4DH59 902 aa12.47□□□□□ -0.41
CNGA3-201ENST00000272602 SLC3A2P08195 630 aaKnown RBP12.47□□□□□ -0.41
CNGA3-201ENST00000272602 NECTIN1Q15223 517 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms