RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 IRS2Q9Y4H2 1338 aa11.54□□□□□ -0.56
TPM3-201ENST00000271850 MED23Q9ULK4 1368 aa11.54□□□□□ -0.56
TPM3-201ENST00000271850 SLC10A3P09131 477 aa11.53□□□□□ -0.56
TPM3-201ENST00000271850 ATP2B4P23634 1241 aa11.53□□□□□ -0.56
TPM3-201ENST00000271850 NOGQ13253 232 aa11.53□□□□□ -0.56
TPM3-201ENST00000271850 FAM161AQ3B820 660 aa11.53□□□□□ -0.56
TPM3-201ENST00000271850 DACT2Q5SW24 774 aa11.53□□□□□ -0.56
TPM3-201ENST00000271850 MOB2Q70IA6 237 aa11.53□□□□□ -0.56
TPM3-201ENST00000271850 AGBL3Q8NEM8 1001 aa11.53□□□□□ -0.56
TPM3-201ENST00000271850 BEGAINQ9BUH8 593 aa11.53□□□□□ -0.56
TPM3-201ENST00000271850 BSDC1Q9NW68 430 aaPredicted RBP11.53□□□□□ -0.56
TPM3-201ENST00000271850 CIZ1Q9ULV3 898 aaPredicted RBP11.53□□□□□ -0.56
TPM3-201ENST00000271850 A0A1B0GUL6 1792 aa11.53□□□□□ -0.56
TPM3-201ENST00000271850 TNRC18O15417 2968 aaPredicted RBP11.53□□□□□ -0.56
TPM3-201ENST00000271850 SNAP23O00161 211 aa11.52□□□□□ -0.57
TPM3-201ENST00000271850 DDX58O95786 925 aaKnown RBP11.52□□□□□ -0.57
TPM3-201ENST00000271850 KIF23Q02241 960 aaPredicted RBP11.52□□□□□ -0.57
TPM3-201ENST00000271850 TWISTNBQ3B726 338 aaPredicted RBP11.52□□□□□ -0.57
TPM3-201ENST00000271850 NBPF9Q3BBW0 867 aa11.52□□□□□ -0.57
TPM3-201ENST00000271850 UBE3BQ7Z3V4 1068 aa11.52□□□□□ -0.57
TPM3-201ENST00000271850 RASAL3Q86YV0 1011 aa11.52□□□□□ -0.57
TPM3-201ENST00000271850 DCPSQ96C86 337 aaKnown RBP11.52□□□□□ -0.57
TPM3-201ENST00000271850 PLA2G12BQ9BX93 195 aa11.52□□□□□ -0.57
TPM3-201ENST00000271850 MYOZ2Q9NPC6 264 aa11.52□□□□□ -0.57
TPM3-201ENST00000271850 FANCIQ9NVI1 1328 aa11.52□□□□□ -0.57
TPM3-201ENST00000271850 PAPPA2Q9BXP8 1791 aa11.51□□□□□ -0.57
TPM3-201ENST00000271850 USP17L3A6NCW0 530 aa11.51□□□□□ -0.57
TPM3-201ENST00000271850 USP17L4A6NCW7 530 aa11.51□□□□□ -0.57
TPM3-201ENST00000271850 CA12O43570 354 aa11.51□□□□□ -0.57
TPM3-201ENST00000271850 CSF1RP07333 972 aa11.51□□□□□ -0.57
TPM3-201ENST00000271850 RGS19P49795 217 aa11.51□□□□□ -0.57
TPM3-201ENST00000271850 CCT4P50991 539 aaKnown RBP11.51□□□□□ -0.57
TPM3-201ENST00000271850 FLIIQ13045 1269 aa11.51□□□□□ -0.57
TPM3-201ENST00000271850 GCKRQ14397 625 aa11.51□□□□□ -0.57
TPM3-201ENST00000271850 PRAMEF18Q5VWM3 479 aa11.51□□□□□ -0.57
TPM3-201ENST00000271850 USP17L1Q7RTZ2 530 aa11.51□□□□□ -0.57
TPM3-201ENST00000271850 PODNQ7Z5L7 613 aa11.51□□□□□ -0.57
TPM3-201ENST00000271850 CSRNP1Q96S65 589 aa11.51□□□□□ -0.57
TPM3-201ENST00000271850 CCDC85CA6NKD9 419 aa11.5□□□□□ -0.57
TPM3-201ENST00000271850 VAMP4O75379 141 aa11.5□□□□□ -0.57
TPM3-201ENST00000271850 USP17L8P0C7I0 530 aa11.5□□□□□ -0.57
TPM3-201ENST00000271850 HSP90B1P14625 803 aaKnown RBP11.5□□□□□ -0.57
TPM3-201ENST00000271850 ZNF157P51786 506 aaPredicted RBP11.5□□□□□ -0.57
TPM3-201ENST00000271850 SULF1Q8IWU6 871 aa11.5□□□□□ -0.57
TPM3-201ENST00000271850 C2orf69Q8N8R5 385 aa11.5□□□□□ -0.57
TPM3-201ENST00000271850 SPOCK2Q92563 424 aa11.5□□□□□ -0.57
TPM3-201ENST00000271850 ZBED3Q96IU2 234 aaPredicted RBP11.5□□□□□ -0.57
TPM3-201ENST00000271850 CDC5LQ99459 802 aaKnown RBP11.5□□□□□ -0.57
TPM3-201ENST00000271850 RNF186Q9NXI6 227 aa11.5□□□□□ -0.57
TPM3-201ENST00000271850 IL16Q14005 1332 aa11.5□□□□□ -0.57
TPM3-201ENST00000271850 HTTP42858 3142 aa11.49□□□□□ -0.57
TPM3-201ENST00000271850 WNT10BO00744 389 aa11.49□□□□□ -0.57
TPM3-201ENST00000271850 ITGA6P23229 1130 aa11.49□□□□□ -0.57
TPM3-201ENST00000271850 PCDHAC2Q9Y5I4 1007 aa11.49□□□□□ -0.57
TPM3-201ENST00000271850 AOX1Q06278 1338 aa11.49□□□□□ -0.57
TPM3-201ENST00000271850 PITPNM2Q9BZ72 1349 aa11.49□□□□□ -0.57
TPM3-201ENST00000271850 TRPA1O75762 1119 aa11.48□□□□□ -0.57
TPM3-201ENST00000271850 SASH1O94885 1247 aa11.48□□□□□ -0.57
TPM3-201ENST00000271850 FOXO4P98177 505 aa11.48□□□□□ -0.57
TPM3-201ENST00000271850 DGKZQ13574 1117 aa11.48□□□□□ -0.57
TPM3-201ENST00000271850 EPHA10Q5JZY3 1008 aa11.48□□□□□ -0.57
TPM3-201ENST00000271850 CERS5Q8N5B7 392 aa11.48□□□□□ -0.57
TPM3-201ENST00000271850 DNAAF4Q8WXU2 420 aa11.48□□□□□ -0.57
TPM3-201ENST00000271850 CCDC102AQ96A19 550 aa11.48□□□□□ -0.57
TPM3-201ENST00000271850 RNF166Q96A37 237 aaPredicted RBP11.48□□□□□ -0.57
TPM3-201ENST00000271850 STK31Q9BXU1 1019 aa11.48□□□□□ -0.57
TPM3-201ENST00000271850 SAGE1Q9NXZ1 904 aa11.48□□□□□ -0.57
TPM3-201ENST00000271850 SSC5DA1L4H1 1573 aa11.48□□□□□ -0.57
TPM3-201ENST00000271850 ZNF804BA4D1E1 1349 aa11.47□□□□□ -0.57
TPM3-201ENST00000271850 F6X3S4 739 aa11.47□□□□□ -0.57
TPM3-201ENST00000271850 EXOSC9Q06265 439 aaKnown RBP11.47□□□□□ -0.57
TPM3-201ENST00000271850 CHRNDQ07001 517 aa11.47□□□□□ -0.57
TPM3-201ENST00000271850 NEXNQ0ZGT2 675 aa11.47□□□□□ -0.57
TPM3-201ENST00000271850 BEND3Q5T5X7 828 aa11.47□□□□□ -0.57
TPM3-201ENST00000271850 STRIP1Q5VSL9 837 aa11.47□□□□□ -0.57
TPM3-201ENST00000271850 COA1Q9GZY4 146 aa11.47□□□□□ -0.57
TPM3-201ENST00000271850 FZD1Q9UP38 647 aa11.47□□□□□ -0.57
TPM3-201ENST00000271850 LEMD3Q9Y2U8 911 aa11.47□□□□□ -0.57
TPM3-201ENST00000271850 BRCA2P51587 3418 aa11.47□□□□□ -0.57
TPM3-201ENST00000271850 AKAP11Q9UKA4 1901 aa11.47□□□□□ -0.57
TPM3-201ENST00000271850 UBE2Q2LH0YL09 131 aa11.46□□□□□ -0.57
TPM3-201ENST00000271850 TAF5LO75529 589 aa11.46□□□□□ -0.57
TPM3-201ENST00000271850 FKBP5Q13451 457 aaPredicted RBP11.46□□□□□ -0.57
TPM3-201ENST00000271850 LINS1Q8NG48 757 aa11.46□□□□□ -0.57
TPM3-201ENST00000271850 SALL2Q9Y467 1007 aaPredicted RBP11.46□□□□□ -0.57
TPM3-201ENST00000271850 IGHMBP2P38935 993 aaKnown RBP11.45□□□□□ -0.58
TPM3-201ENST00000271850 FKBP1BP68106 108 aa11.45□□□□□ -0.58
TPM3-201ENST00000271850 KIAA0825Q8IV33 1275 aa11.45□□□□□ -0.58
TPM3-201ENST00000271850 HELBQ8NG08 1087 aaPredicted RBP11.45□□□□□ -0.58
TPM3-201ENST00000271850 FBXW7Q969H0 707 aa11.45□□□□□ -0.58
TPM3-201ENST00000271850 CD209Q9NNX6 404 aa11.45□□□□□ -0.58
TPM3-201ENST00000271850 CACNA1FO60840 1977 aa11.45□□□□□ -0.58
TPM3-201ENST00000271850 GTF2IP78347 998 aa11.44□□□□□ -0.58
TPM3-201ENST00000271850 TTLL5Q6EMB2 1281 aa11.44□□□□□ -0.58
TPM3-201ENST00000271850 WDR63Q8IWG1 891 aa11.44□□□□□ -0.58
TPM3-201ENST00000271850 KAZALD1Q96I82 304 aa11.44□□□□□ -0.58
TPM3-201ENST00000271850 ZNF594Q96JF6 807 aaPredicted RBP11.44□□□□□ -0.58
TPM3-201ENST00000271850 CHMP4AQ9BY43 222 aa11.44□□□□□ -0.58
TPM3-201ENST00000271850 R3HDMLQ9H3Y0 253 aa11.44□□□□□ -0.58
TPM3-201ENST00000271850 MRS2Q9HD23 443 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms