RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 FBXW7Q969H0 707 aa30.12■■■□□ 2.41
SSBP4-201ENST00000270061 RIPOR2Q9Y4F9 1068 aa30.12■■■□□ 2.41
SSBP4-201ENST00000270061 IRS2Q9Y4H2 1338 aa30.12■■■□□ 2.41
SSBP4-201ENST00000270061 RBM26Q5T8P6 1007 aaKnown RBP30.11■■■□□ 2.41
SSBP4-201ENST00000270061 STRIP1Q5VSL9 837 aa30.11■■■□□ 2.41
SSBP4-201ENST00000270061 MROH5Q6ZUA9 1318 aa30.11■■■□□ 2.41
SSBP4-201ENST00000270061 GMLQ99445 158 aa30.1■■■□□ 2.41
SSBP4-201ENST00000270061 APBB1O00213 710 aa30.1■■■□□ 2.41
SSBP4-201ENST00000270061 SURF6O75683 361 aaKnown RBP30.1■■■□□ 2.41
SSBP4-201ENST00000270061 EGFRP00533 1210 aa30.1■■■□□ 2.41
SSBP4-201ENST00000270061 DACT2Q5SW24 774 aa30.1■■■□□ 2.41
SSBP4-201ENST00000270061 CD209Q9NNX6 404 aa30.1■■■□□ 2.41
SSBP4-201ENST00000270061 TTLL5Q6EMB2 1281 aa30.09■■■□□ 2.41
SSBP4-201ENST00000270061 ZNF804AQ7Z570 1209 aa30.09■■■□□ 2.41
SSBP4-201ENST00000270061 OSBPL3Q9H4L5 887 aa30.09■■■□□ 2.41
SSBP4-201ENST00000270061 USP17L8P0C7I0 530 aa30.08■■■□□ 2.41
SSBP4-201ENST00000270061 UBE4AQ14139 1066 aa30.08■■■□□ 2.41
SSBP4-201ENST00000270061 KIF4BQ2VIQ3 1234 aa30.08■■■□□ 2.41
SSBP4-201ENST00000270061 KLHDC4Q8TBB5 520 aa30.08■■■□□ 2.41
SSBP4-201ENST00000270061 MYO3BQ8WXR4 1341 aa30.08■■■□□ 2.41
SSBP4-201ENST00000270061 TRAF5O00463 557 aa30.08■■■□□ 2.41
SSBP4-201ENST00000270061 ANP32AP39687 249 aaKnown RBP30.08■■■□□ 2.41
SSBP4-201ENST00000270061 ZNF280AP59817 542 aaPredicted RBP30.08■■■□□ 2.41
SSBP4-201ENST00000270061 LRRC24Q50LG9 513 aa30.08■■■□□ 2.41
SSBP4-201ENST00000270061 GTF2IP78347 998 aa30.06■■■□□ 2.4
SSBP4-201ENST00000270061 FMR1Q06787 632 aaKnown RBP eCLIP30.06■■■□□ 2.4
SSBP4-201ENST00000270061 METTL24Q5JXM2 366 aa30.06■■■□□ 2.4
SSBP4-201ENST00000270061 MXD3Q9BW11 206 aa30.06■■■□□ 2.4
SSBP4-201ENST00000270061 GLIS2Q9BZE0 524 aaPredicted RBP30.06■■■□□ 2.4
SSBP4-201ENST00000270061 SALL3Q9BXA9 1300 aa30.06■■■□□ 2.4
SSBP4-201ENST00000270061 TTC22Q5TAA0 569 aa30.05■■■□□ 2.4
SSBP4-201ENST00000270061 CDC37L1Q7L3B6 337 aa30.05■■■□□ 2.4
SSBP4-201ENST00000270061 KIF1BPQ96EK5 621 aa30.05■■■□□ 2.4
SSBP4-201ENST00000270061 OTUD7AQ8TE49 926 aaPredicted RBP30.05■■■□□ 2.4
SSBP4-201ENST00000270061 IL1R1P14778 569 aa30.04■■■□□ 2.4
SSBP4-201ENST00000270061 RFX5P48382 616 aaPredicted RBP30.04■■■□□ 2.4
SSBP4-201ENST00000270061 OGFOD1Q8N543 542 aa30.04■■■□□ 2.4
SSBP4-201ENST00000270061 RHPN1Q8TCX5 695 aa30.04■■■□□ 2.4
SSBP4-201ENST00000270061 MKRN1Q9UHC7 482 aaKnown RBP30.04■■■□□ 2.4
SSBP4-201ENST00000270061 JMYQ8N9B5 988 aa30.03■■■□□ 2.4
SSBP4-201ENST00000270061 MYOZ2Q9NPC6 264 aa30.03■■■□□ 2.4
SSBP4-201ENST00000270061 PTPN12Q05209 780 aaKnown RBP30.03■■■□□ 2.4
SSBP4-201ENST00000270061 PDE8BO95263 885 aa30.02■■■□□ 2.4
SSBP4-201ENST00000270061 SEC24BO95487 1268 aa30.02■■■□□ 2.4
SSBP4-201ENST00000270061 ERC1Q8IUD2 1116 aa30.02■■■□□ 2.4
SSBP4-201ENST00000270061 DCPSQ96C86 337 aaKnown RBP30.02■■■□□ 2.4
SSBP4-201ENST00000270061 GSPT1P15170 499 aaKnown RBP30.01■■■□□ 2.39
SSBP4-201ENST00000270061 PDE1AP54750 535 aa30.01■■■□□ 2.39
SSBP4-201ENST00000270061 VGLL2Q8N8G2 317 aa30.01■■■□□ 2.39
SSBP4-201ENST00000270061 ABT1Q9ULW3 272 aaKnown RBP30.01■■■□□ 2.39
SSBP4-201ENST00000270061 CNTNAP1P78357 1384 aa30.01■■■□□ 2.39
SSBP4-201ENST00000270061 EYA2O00167 538 aa30■■■□□ 2.39
SSBP4-201ENST00000270061 KRT26Q7Z3Y9 468 aa30■■■□□ 2.39
SSBP4-201ENST00000270061 STAP2Q9UGK3 403 aa30■■■□□ 2.39
SSBP4-201ENST00000270061 GYG1P46976 350 aa30■■■□□ 2.39
SSBP4-201ENST00000270061 CST9Q5W186 159 aa30■■■□□ 2.39
SSBP4-201ENST00000270061 USP48Q86UV5 1035 aa30■■■□□ 2.39
SSBP4-201ENST00000270061 GGA3Q9NZ52 723 aa30■■■□□ 2.39
SSBP4-201ENST00000270061 HIBADHP31937 336 aaKnown RBP29.99■■■□□ 2.39
SSBP4-201ENST00000270061 MMP14P50281 582 aa29.99■■■□□ 2.39
SSBP4-201ENST00000270061 SCARF1Q14162 830 aa29.99■■■□□ 2.39
SSBP4-201ENST00000270061 FAM84BQ96KN1 310 aaPredicted RBP29.99■■■□□ 2.39
SSBP4-201ENST00000270061 CELF2O95319 508 aaKnown RBP29.98■■■□□ 2.39
SSBP4-201ENST00000270061 KIAA0825Q8IV33 1275 aa29.98■■■□□ 2.39
SSBP4-201ENST00000270061 AOX1Q06278 1338 aa29.98■■■□□ 2.39
SSBP4-201ENST00000270061 FBXO3Q9UK99 471 aa29.98■■■□□ 2.39
SSBP4-201ENST00000270061 HDAC9Q9UKV0 1011 aa29.98■■■□□ 2.39
SSBP4-201ENST00000270061 SASH1O94885 1247 aa29.97■■■□□ 2.39
SSBP4-201ENST00000270061 MX1P20591 662 aa29.97■■■□□ 2.39
SSBP4-201ENST00000270061 VPS37DQ86XT2 251 aa29.97■■■□□ 2.39
SSBP4-201ENST00000270061 SIL1Q9H173 461 aa29.97■■■□□ 2.39
SSBP4-201ENST00000270061 ASTN2O75129 1339 aaPredicted RBP29.96■■■□□ 2.39
SSBP4-201ENST00000270061 RASSF10A6NK89 507 aa29.96■■■□□ 2.39
SSBP4-201ENST00000270061 SULF1Q8IWU6 871 aa29.96■■■□□ 2.39
SSBP4-201ENST00000270061 ZNF408Q9H9D4 720 aa29.96■■■□□ 2.39
SSBP4-201ENST00000270061 UPF2Q9HAU5 1272 aaKnown RBP29.96■■■□□ 2.39
SSBP4-201ENST00000270061 COPRSQ9NQ92 184 aa29.96■■■□□ 2.39
SSBP4-201ENST00000270061 PA2G4Q9UQ80 394 aaKnown RBP29.96■■■□□ 2.39
SSBP4-201ENST00000270061 OS9Q13438 667 aaPredicted RBP29.95■■■□□ 2.39
SSBP4-201ENST00000270061 PUM3Q15397 648 aaKnown RBP29.95■■■□□ 2.39
SSBP4-201ENST00000270061 DEFB115Q30KQ5 88 aa29.95■■■□□ 2.39
SSBP4-201ENST00000270061 CAVIN4Q5BKX8 364 aa29.95■■■□□ 2.39
SSBP4-201ENST00000270061 ANGEL2Q5VTE6 544 aaKnown RBP29.95■■■□□ 2.39
SSBP4-201ENST00000270061 ATG9AQ7Z3C6 839 aa29.95■■■□□ 2.39
SSBP4-201ENST00000270061 TDRD7Q8NHU6 1098 aaKnown RBP29.95■■■□□ 2.39
SSBP4-201ENST00000270061 CIAO1O76071 339 aa29.95■■■□□ 2.38
SSBP4-201ENST00000270061 CERS5Q8N5B7 392 aa29.95■■■□□ 2.38
SSBP4-201ENST00000270061 IL1RAPL2Q9NP60 686 aa29.95■■■□□ 2.38
SSBP4-201ENST00000270061 JAG2Q9Y219 1238 aa29.95■■■□□ 2.38
SSBP4-201ENST00000270061 FKBP1AP62942 108 aaKnown RBP29.94■■■□□ 2.38
SSBP4-201ENST00000270061 G3BP1Q13283 466 aaKnown RBP eCLIP29.94■■■□□ 2.38
SSBP4-201ENST00000270061 BCL11AQ9H165 835 aa29.94■■■□□ 2.38
SSBP4-201ENST00000270061 ADM5C9JUS6 153 aa29.93■■■□□ 2.38
SSBP4-201ENST00000270061 MYH13Q9UKX3 1938 aa29.93■■■□□ 2.38
SSBP4-201ENST00000270061 CDC45O75419 566 aa29.92■■■□□ 2.38
SSBP4-201ENST00000270061 IFIT1P09914 478 aaKnown RBP29.92■■■□□ 2.38
SSBP4-201ENST00000270061 NBPF9Q3BBW0 867 aa29.92■■■□□ 2.38
SSBP4-201ENST00000270061 DLK2Q6UY11 383 aa29.92■■■□□ 2.38
SSBP4-201ENST00000270061 FBXO33Q7Z6M2 555 aa29.92■■■□□ 2.38
SSBP4-201ENST00000270061 IPO9Q96P70 1041 aaKnown RBP29.92■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms