RNA–Protein interactions for RNA: ENST00000269571.9

ERBB2-201, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERBB2, Length 4,545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-201ENST00000269571 XPO4Q9C0E2 1151 aaKnown RBP13.78□□□□□ -0.2
ERBB2-201ENST00000269571 INCENPQ9NQS7 918 aa13.78□□□□□ -0.2
ERBB2-201ENST00000269571 MYO1BO43795 1136 aa13.77□□□□□ -0.2
ERBB2-201ENST00000269571 TUBB4AP04350 444 aa13.77□□□□□ -0.2
ERBB2-201ENST00000269571 RBM5P52756 815 aaKnown RBP eCLIP13.77□□□□□ -0.29e-8■■■□□ 16.8
ERBB2-201ENST00000269571 CACTINQ8WUQ7 758 aaKnown RBP13.77□□□□□ -0.2
ERBB2-201ENST00000269571 DHX58Q96C10 678 aa13.77□□□□□ -0.2
ERBB2-201ENST00000269571 RRP15Q9Y3B9 282 aaKnown RBP13.77□□□□□ -0.2
ERBB2-201ENST00000269571 EXOC5O00471 708 aa13.77□□□□□ -0.21
ERBB2-201ENST00000269571 MAP3K12Q12852 859 aa13.77□□□□□ -0.21
ERBB2-201ENST00000269571 PPP2R5AQ15172 486 aa13.77□□□□□ -0.21
ERBB2-201ENST00000269571 CCDC178Q5BJE1 867 aa13.77□□□□□ -0.21
ERBB2-201ENST00000269571 OTUD6BQ8N6M0 293 aa13.77□□□□□ -0.21
ERBB2-201ENST00000269571 WDHD1O75717 1129 aaPredicted RBP13.77□□□□□ -0.21
ERBB2-201ENST00000269571 NEFHP12036 1026 aa13.77□□□□□ -0.21
ERBB2-201ENST00000269571 RPS6KB1P23443 525 aa13.77□□□□□ -0.21
ERBB2-201ENST00000269571 MCM3P25205 808 aa13.77□□□□□ -0.21
ERBB2-201ENST00000269571 PTPN21Q16825 1174 aa13.76□□□□□ -0.21
ERBB2-201ENST00000269571 RRAGBQ5VZM2 374 aa13.76□□□□□ -0.21
ERBB2-201ENST00000269571 XAGE3Q8WTP9 111 aa13.76□□□□□ -0.21
ERBB2-201ENST00000269571 TTC41PQ6P2S7 1318 aa13.76□□□□□ -0.21
ERBB2-201ENST00000269571 PRC1O43663 620 aa13.76□□□□□ -0.21
ERBB2-201ENST00000269571 USO1O60763 962 aaKnown RBP13.76□□□□□ -0.21
ERBB2-201ENST00000269571 LMBR1LQ6UX01 489 aa13.76□□□□□ -0.21
ERBB2-201ENST00000269571 DHX32Q7L7V1 743 aaKnown RBP13.76□□□□□ -0.21
ERBB2-201ENST00000269571 MYO1CO00159 1063 aa13.76□□□□□ -0.21
ERBB2-201ENST00000269571 MYL5Q02045 173 aa13.76□□□□□ -0.21
ERBB2-201ENST00000269571 LONRF3Q496Y0 759 aa13.76□□□□□ -0.21
ERBB2-201ENST00000269571 DDX41Q9UJV9 622 aaKnown RBP13.76□□□□□ -0.21
ERBB2-201ENST00000269571 CCDC172P0C7W6 258 aa13.76□□□□□ -0.21
ERBB2-201ENST00000269571 TRIM21P19474 475 aaKnown RBP13.76□□□□□ -0.21
ERBB2-201ENST00000269571 IFFO1Q0D2I5 559 aa13.76□□□□□ -0.21
ERBB2-201ENST00000269571 ABCC4O15439 1325 aa13.75□□□□□ -0.21
ERBB2-201ENST00000269571 HOXC9P31274 260 aa13.75□□□□□ -0.21
ERBB2-201ENST00000269571 IL13P35225 146 aa13.75□□□□□ -0.21
ERBB2-201ENST00000269571 RAD51AP2Q09MP3 1159 aa13.75□□□□□ -0.21
ERBB2-201ENST00000269571 GOLGA5Q8TBA6 731 aa13.75□□□□□ -0.21
ERBB2-201ENST00000269571 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.75□□□□□ -0.21
ERBB2-201ENST00000269571 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.75□□□□□ -0.21
ERBB2-201ENST00000269571 TMEM2Q9UHN6 1383 aa13.75□□□□□ -0.21
ERBB2-201ENST00000269571 CHL1O00533 1208 aa13.75□□□□□ -0.21
ERBB2-201ENST00000269571 AKR1B10O60218 316 aa13.75□□□□□ -0.21
ERBB2-201ENST00000269571 FMNL3Q8IVF7 1028 aa13.75□□□□□ -0.21
ERBB2-201ENST00000269571 CEP112Q8N8E3 955 aa13.75□□□□□ -0.21
ERBB2-201ENST00000269571 DDX17Q92841 729 aaKnown RBP13.75□□□□□ -0.21
ERBB2-201ENST00000269571 SMC1AQ14683 1233 aaKnown RBP13.75□□□□□ -0.21
ERBB2-201ENST00000269571 ADCK5Q3MIX3 580 aa13.75□□□□□ -0.21
ERBB2-201ENST00000269571 MKNK2Q9HBH9 465 aa13.75□□□□□ -0.21
ERBB2-201ENST00000269571 GOPCQ9HD26 462 aa13.75□□□□□ -0.21
ERBB2-201ENST00000269571 IDEP14735 1019 aa13.74□□□□□ -0.21
ERBB2-201ENST00000269571 SLC4A8Q2Y0W8 1093 aa13.74□□□□□ -0.21
ERBB2-201ENST00000269571 CTCFLQ8NI51 663 aaPredicted RBP13.74□□□□□ -0.21
ERBB2-201ENST00000269571 BMP2KQ9NSY1 1161 aaPredicted RBP13.74□□□□□ -0.21
ERBB2-201ENST00000269571 TPCN1Q9ULQ1 816 aa13.74□□□□□ -0.21
ERBB2-201ENST00000269571 ADGBQ8N7X0 1667 aa13.74□□□□□ -0.21
ERBB2-201ENST00000269571 CCDC196A0A1B0GTZ2 297 aa13.74□□□□□ -0.21
ERBB2-201ENST00000269571 ZBTB43O43298 467 aa13.74□□□□□ -0.21
ERBB2-201ENST00000269571 GPIHBP1Q8IV16 184 aa13.74□□□□□ -0.21
ERBB2-201ENST00000269571 LRRC8AQ8IWT6 810 aa13.74□□□□□ -0.21
ERBB2-201ENST00000269571 CLNS1AP54105 237 aaKnown RBP13.74□□□□□ -0.21
ERBB2-201ENST00000269571 NLRP5P59047 1200 aa13.74□□□□□ -0.21
ERBB2-201ENST00000269571 SYCP1Q15431 976 aa13.74□□□□□ -0.21
ERBB2-201ENST00000269571 NCAPGQ9BPX3 1015 aa13.74□□□□□ -0.21
ERBB2-201ENST00000269571 PHF23Q9BUL5 403 aaPredicted RBP13.74□□□□□ -0.21
ERBB2-201ENST00000269571 MKRN1Q9UHC7 482 aaKnown RBP13.74□□□□□ -0.21
ERBB2-201ENST00000269571 MRVI1Q9Y6F6 885 aa13.74□□□□□ -0.21
ERBB2-201ENST00000269571 ANKRD18BA2A2Z9 1011 aa13.74□□□□□ -0.21
ERBB2-201ENST00000269571 CCT6AP40227 531 aaKnown RBP13.74□□□□□ -0.21
ERBB2-201ENST00000269571 IQCA1Q86XH1 822 aa13.74□□□□□ -0.21
ERBB2-201ENST00000269571 NFATC2IPQ8NCF5 419 aa13.74□□□□□ -0.21
ERBB2-201ENST00000269571 TRIM47Q96LD4 638 aa13.74□□□□□ -0.21
ERBB2-201ENST00000269571 CWC25Q9NXE8 425 aaPredicted RBP13.74□□□□□ -0.21
ERBB2-201ENST00000269571 MTX1Q13505 466 aa13.73□□□□□ -0.21
ERBB2-201ENST00000269571 ARID5BQ14865 1188 aa13.73□□□□□ -0.21
ERBB2-201ENST00000269571 CCDC96Q2M329 555 aa13.73□□□□□ -0.21
ERBB2-201ENST00000269571 CAVIN4Q5BKX8 364 aa13.73□□□□□ -0.21
ERBB2-201ENST00000269571 HDXQ7Z353 690 aa13.73□□□□□ -0.21
ERBB2-201ENST00000269571 CHMP4BP1P59074 171 aa13.73□□□□□ -0.21
ERBB2-201ENST00000269571 TFCP2Q12800 502 aa13.73□□□□□ -0.21
ERBB2-201ENST00000269571 KSR2Q6VAB6 950 aa13.73□□□□□ -0.21
ERBB2-201ENST00000269571 DESI2Q9BSY9 194 aa13.73□□□□□ -0.21
ERBB2-201ENST00000269571 PPP1R1BQ9UD71 204 aaPredicted RBP13.73□□□□□ -0.21
ERBB2-201ENST00000269571 PLA2R1Q13018 1463 aa13.73□□□□□ -0.21
ERBB2-201ENST00000269571 TMCO5BA8MYB1 307 aa13.72□□□□□ -0.21
ERBB2-201ENST00000269571 SEC31AO94979 1220 aaKnown RBP13.72□□□□□ -0.21
ERBB2-201ENST00000269571 SNRPA1P09661 255 aaKnown RBP13.72□□□□□ -0.21
ERBB2-201ENST00000269571 INPP5BP32019 993 aa13.72□□□□□ -0.21
ERBB2-201ENST00000269571 AP1ARQ63HQ0 302 aa13.72□□□□□ -0.21
ERBB2-201ENST00000269571 BICC1Q9H694 974 aaKnown RBP13.72□□□□□ -0.21
ERBB2-201ENST00000269571 IQSEC3Q9UPP2 1182 aaPredicted RBP13.72□□□□□ -0.21
ERBB2-201ENST00000269571 ZBTB12Q9Y330 459 aaPredicted RBP13.72□□□□□ -0.21
ERBB2-201ENST00000269571 TIMM10P62072 90 aa13.72□□□□□ -0.21
ERBB2-201ENST00000269571 ZCRB1Q8TBF4 217 aaKnown RBP13.72□□□□□ -0.21
ERBB2-201ENST00000269571 USP28Q96RU2 1077 aa13.72□□□□□ -0.21
ERBB2-201ENST00000269571 ZNF202O95125 648 aa13.72□□□□□ -0.21
ERBB2-201ENST00000269571 TRMT44Q8IYL2 757 aaKnown RBP13.72□□□□□ -0.21
ERBB2-201ENST00000269571 PDLIM2Q96JY6 352 aa13.72□□□□□ -0.21
ERBB2-201ENST00000269571 MYCNP04198 464 aaPredicted RBP13.72□□□□□ -0.21
ERBB2-201ENST00000269571 ADKP55263 362 aaKnown RBP13.72□□□□□ -0.21
ERBB2-201ENST00000269571 AKAP4Q5JQC9 854 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms