RNA–Protein interactions for RNA: ENST00000263559.10

VPS26A-201, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS26A, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-201ENST00000263559 IQSEC3Q9UPP2 1182 aaPredicted RBP18.84■□□□□ 0.61
VPS26A-201ENST00000263559 ZNF804BA4D1E1 1349 aa18.83■□□□□ 0.61
VPS26A-201ENST00000263559 SERPINB2P05120 415 aa18.83■□□□□ 0.61
VPS26A-201ENST00000263559 TPCN1Q9ULQ1 816 aa18.83■□□□□ 0.6
VPS26A-201ENST00000263559 TOB2Q14106 344 aaPredicted RBP18.82■□□□□ 0.6
VPS26A-201ENST00000263559 ME3Q16798 604 aa18.82■□□□□ 0.6
VPS26A-201ENST00000263559 FGAP02671 866 aa18.82■□□□□ 0.6
VPS26A-201ENST00000263559 HMGB2P26583 209 aaKnown RBP18.82■□□□□ 0.6
VPS26A-201ENST00000263559 MAP3K12Q12852 859 aa18.82■□□□□ 0.6
VPS26A-201ENST00000263559 ZNF827Q17R98 1081 aa18.82■□□□□ 0.6
VPS26A-201ENST00000263559 CLEC17AQ6ZS10 378 aa18.82■□□□□ 0.6
VPS26A-201ENST00000263559 FAM84BQ96KN1 310 aaPredicted RBP18.82■□□□□ 0.6
VPS26A-201ENST00000263559 ANKRD2Q9GZV1 360 aa18.82■□□□□ 0.6
VPS26A-201ENST00000263559 SH2B1Q9NRF2 756 aaPredicted RBP18.82■□□□□ 0.6
VPS26A-201ENST00000263559 ANKRD1Q15327 319 aa18.81■□□□□ 0.6
VPS26A-201ENST00000263559 CAVIN4Q5BKX8 364 aa18.81■□□□□ 0.6
VPS26A-201ENST00000263559 MAGEB6Q8N7X4 407 aa18.81■□□□□ 0.6
VPS26A-201ENST00000263559 TFCP2L1Q9NZI6 479 aa18.81■□□□□ 0.6
VPS26A-201ENST00000263559 E7EWF7 191 aa18.81■□□□□ 0.6
VPS26A-201ENST00000263559 CCDC83Q8IWF9 413 aa18.81■□□□□ 0.6
VPS26A-201ENST00000263559 GNL3LQ9NVN8 582 aaKnown RBP18.81■□□□□ 0.6
VPS26A-201ENST00000263559 CTNNA3Q9UI47 895 aa18.81■□□□□ 0.6
VPS26A-201ENST00000263559 KLRK1P26718 216 aa18.8■□□□□ 0.6
VPS26A-201ENST00000263559 DDX11L8A8MPP1 907 aa18.8■□□□□ 0.6
VPS26A-201ENST00000263559 DDR1Q08345 913 aa18.8■□□□□ 0.6
VPS26A-201ENST00000263559 GRAPQ13588 217 aa18.8■□□□□ 0.6
VPS26A-201ENST00000263559 GRAPLQ8TC17 118 aaPredicted RBP18.8■□□□□ 0.6
VPS26A-201ENST00000263559 AKT1S1Q96B36 256 aa18.8■□□□□ 0.6
VPS26A-201ENST00000263559 RGS17Q9UGC6 210 aaPredicted RBP18.8■□□□□ 0.6
VPS26A-201ENST00000263559 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.8■□□□□ 0.6
VPS26A-201ENST00000263559 BAG4O95429 457 aaKnown RBP18.79■□□□□ 0.6
VPS26A-201ENST00000263559 ST5P78524 1137 aa18.79■□□□□ 0.6
VPS26A-201ENST00000263559 ST3GAL1Q11201 340 aa18.79■□□□□ 0.6
VPS26A-201ENST00000263559 VPS37DQ86XT2 251 aa18.79■□□□□ 0.6
VPS26A-201ENST00000263559 FBXO33Q7Z6M2 555 aa18.79■□□□□ 0.6
VPS26A-201ENST00000263559 NECAB1Q8N987 351 aa18.79■□□□□ 0.6
VPS26A-201ENST00000263559 POLRMTO00411 1230 aaKnown RBP18.78■□□□□ 0.6
VPS26A-201ENST00000263559 HMGB1P09429 215 aaKnown RBP18.78■□□□□ 0.6
VPS26A-201ENST00000263559 IMMTQ16891 758 aaKnown RBP18.78■□□□□ 0.6
VPS26A-201ENST00000263559 Q6ZUG5 572 aa18.78■□□□□ 0.6
VPS26A-201ENST00000263559 LRP2BPQ9P2M1 347 aa18.78■□□□□ 0.6
VPS26A-201ENST00000263559 COL1A1P02452 1464 aaPredicted RBP18.78■□□□□ 0.6
VPS26A-201ENST00000263559 BRD1O95696 1058 aa18.78■□□□□ 0.6
VPS26A-201ENST00000263559 HAND2P61296 217 aa18.78■□□□□ 0.6
VPS26A-201ENST00000263559 DHX32Q7L7V1 743 aaKnown RBP18.78■□□□□ 0.6
VPS26A-201ENST00000263559 SLC51AQ86UW1 340 aa18.78■□□□□ 0.6
VPS26A-201ENST00000263559 AIDAQ96BJ3 306 aa18.78■□□□□ 0.6
VPS26A-201ENST00000263559 STRBPQ96SI9 672 aaKnown RBP18.78■□□□□ 0.6
VPS26A-201ENST00000263559 FOXD4L5Q5VV16 416 aaPredicted RBP18.77■□□□□ 0.6
VPS26A-201ENST00000263559 COL23A1Q86Y22 540 aaPredicted RBP18.77■□□□□ 0.6
VPS26A-201ENST00000263559 FOXD4L4Q8WXT5 416 aaPredicted RBP18.77■□□□□ 0.6
VPS26A-201ENST00000263559 LRRC2Q9BYS8 371 aa18.77■□□□□ 0.6
VPS26A-201ENST00000263559 SMC3Q9UQE7 1217 aa18.77■□□□□ 0.6
VPS26A-201ENST00000263559 CRY2Q49AN0 593 aa18.77■□□□□ 0.6
VPS26A-201ENST00000263559 RPGRQ92834 1020 aaKnown RBP18.77■□□□□ 0.6
VPS26A-201ENST00000263559 ABCF2Q9UG63 623 aa18.77■□□□□ 0.6
VPS26A-201ENST00000263559 DTNBO60941 627 aa18.77■□□□□ 0.59
VPS26A-201ENST00000263559 EXOSC10Q01780 885 aaKnown RBP18.77■□□□□ 0.59
VPS26A-201ENST00000263559 DENND2AQ9ULE3 1009 aa18.77■□□□□ 0.59
VPS26A-201ENST00000263559 APPP05067 770 aa18.76■□□□□ 0.59
VPS26A-201ENST00000263559 POTEAQ6S8J7 498 aa18.76■□□□□ 0.59
VPS26A-201ENST00000263559 TXNRD3Q86VQ6 643 aa18.76■□□□□ 0.59
VPS26A-201ENST00000263559 MYH13Q9UKX3 1938 aa18.76■□□□□ 0.59
VPS26A-201ENST00000263559 TNS1Q9HBL0 1735 aaKnown RBP18.75■□□□□ 0.59
VPS26A-201ENST00000263559 ZNF213O14771 459 aa18.75■□□□□ 0.59
VPS26A-201ENST00000263559 TRAK2O60296 914 aa18.75■□□□□ 0.59
VPS26A-201ENST00000263559 MBD4O95243 580 aa18.75■□□□□ 0.59
VPS26A-201ENST00000263559 HIBADHP31937 336 aaKnown RBP18.75■□□□□ 0.59
VPS26A-201ENST00000263559 ARMT1Q9H993 441 aa18.75■□□□□ 0.59
VPS26A-201ENST00000263559 ANKIB1Q9P2G1 1089 aa18.75■□□□□ 0.59
VPS26A-201ENST00000263559 GJB2P29033 226 aa18.75■□□□□ 0.59
VPS26A-201ENST00000263559 GSE1Q14687 1217 aa18.75■□□□□ 0.59
VPS26A-201ENST00000263559 DEKP35659 375 aaKnown RBP18.74■□□□□ 0.59
VPS26A-201ENST00000263559 STK3Q13188 491 aa18.74■□□□□ 0.59
VPS26A-201ENST00000263559 BRF1Q92994 677 aa18.74■□□□□ 0.59
VPS26A-201ENST00000263559 RAI14Q9P0K7 980 aa18.74■□□□□ 0.59
VPS26A-201ENST00000263559 IRS2Q9Y4H2 1338 aa18.74■□□□□ 0.59
VPS26A-201ENST00000263559 PATL2C9JE40 543 aaKnown RBP18.74■□□□□ 0.59
VPS26A-201ENST00000263559 SEMA3EO15041 775 aa18.74■□□□□ 0.59
VPS26A-201ENST00000263559 FGD1P98174 961 aa18.74■□□□□ 0.59
VPS26A-201ENST00000263559 CHST3Q7LGC8 479 aa18.74■□□□□ 0.59
VPS26A-201ENST00000263559 MCTP1Q6DN14 999 aa18.73■□□□□ 0.59
VPS26A-201ENST00000263559 NLGN1Q8N2Q7 840 aa18.73■□□□□ 0.59
VPS26A-201ENST00000263559 RBM17Q96I25 401 aaKnown RBP18.73■□□□□ 0.59
VPS26A-201ENST00000263559 CYP7A1P22680 504 aa18.73■□□□□ 0.59
VPS26A-201ENST00000263559 LCORLQ8N3X6 602 aa18.73■□□□□ 0.59
VPS26A-201ENST00000263559 CHAMP1Q96JM3 812 aa18.73■□□□□ 0.59
VPS26A-201ENST00000263559 AGXT2Q9BYV1 514 aa18.73■□□□□ 0.59
VPS26A-201ENST00000263559 GOLGA6L22H0YM25 854 aa18.72■□□□□ 0.59
VPS26A-201ENST00000263559 SYT1P21579 422 aa18.72■□□□□ 0.59
VPS26A-201ENST00000263559 ADGRA1Q86SQ6 560 aa18.72■□□□□ 0.59
VPS26A-201ENST00000263559 MIGA1Q8NAN2 632 aa18.72■□□□□ 0.59
VPS26A-201ENST00000263559 NBPF3Q9H094 633 aa18.72■□□□□ 0.59
VPS26A-201ENST00000263559 LEMD3Q9Y2U8 911 aa18.72■□□□□ 0.59
VPS26A-201ENST00000263559 CACNA1SQ13698 1873 aa18.72■□□□□ 0.59
VPS26A-201ENST00000263559 XDHP47989 1333 aa18.72■□□□□ 0.59
VPS26A-201ENST00000263559 ALX1Q15699 326 aa18.72■□□□□ 0.59
VPS26A-201ENST00000263559 IFNL3Q8IZI9 196 aa18.72■□□□□ 0.59
VPS26A-201ENST00000263559 WDR33Q9C0J8 1336 aaKnown RBP18.72■□□□□ 0.59
VPS26A-201ENST00000263559 EPB41L4AQ9HCS5 686 aaPredicted RBP18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms