RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 C5P01031 1676 aa20.3■□□□□ 0.84
TRAM1-201ENST00000262213 SLC3A2P08195 630 aaKnown RBP20.29■□□□□ 0.84
TRAM1-201ENST00000262213 IFIT1P09914 478 aaKnown RBP20.29■□□□□ 0.84
TRAM1-201ENST00000262213 RABL6Q3YEC7 729 aaPredicted RBP20.29■□□□□ 0.84
TRAM1-201ENST00000262213 ZMYM1Q5SVZ6 1142 aa20.29■□□□□ 0.84
TRAM1-201ENST00000262213 RTEL1Q9NZ71 1219 aa20.29■□□□□ 0.84
TRAM1-201ENST00000262213 LRRC24Q50LG9 513 aa20.29■□□□□ 0.84
TRAM1-201ENST00000262213 ERICH4A6NGS2 130 aa20.29■□□□□ 0.84
TRAM1-201ENST00000262213 SPTLC2O15270 562 aa20.29■□□□□ 0.84
TRAM1-201ENST00000262213 MARCKSP29966 332 aaPredicted RBP20.29■□□□□ 0.84
TRAM1-201ENST00000262213 WASHC4Q2M389 1173 aa20.29■□□□□ 0.84
TRAM1-201ENST00000262213 SNRPA1P09661 255 aaKnown RBP20.28■□□□□ 0.84
TRAM1-201ENST00000262213 ATL3Q6DD88 541 aa20.28■□□□□ 0.84
TRAM1-201ENST00000262213 ZNF274Q96GC6 653 aaPredicted RBP20.28■□□□□ 0.84
TRAM1-201ENST00000262213 OSBPL5Q9H0X9 879 aaPredicted RBP20.28■□□□□ 0.84
TRAM1-201ENST00000262213 ORC3Q9UBD5 711 aaPredicted RBP20.28■□□□□ 0.84
TRAM1-201ENST00000262213 KLF18A0A0U1RQI7 1052 aa20.28■□□□□ 0.84
TRAM1-201ENST00000262213 GOLGA8BA8MQT2 603 aa20.28■□□□□ 0.84
TRAM1-201ENST00000262213 GOLGA8FQ08AF8 430 aa20.28■□□□□ 0.84
TRAM1-201ENST00000262213 GOLGA8DPQ0D2H9 430 aa20.28■□□□□ 0.84
TRAM1-201ENST00000262213 ATG9AQ7Z3C6 839 aa20.28■□□□□ 0.84
TRAM1-201ENST00000262213 RNF113AO15541 343 aaKnown RBP20.27■□□□□ 0.84
TRAM1-201ENST00000262213 ZNF202O95125 648 aa20.27■□□□□ 0.84
TRAM1-201ENST00000262213 ATP1A3P13637 1013 aa20.27■□□□□ 0.84
TRAM1-201ENST00000262213 SYNE3Q6ZMZ3 975 aa20.27■□□□□ 0.84
TRAM1-201ENST00000262213 AGXT2Q9BYV1 514 aa20.27■□□□□ 0.84
TRAM1-201ENST00000262213 ZNF446Q9NWS9 450 aa20.27■□□□□ 0.84
TRAM1-201ENST00000262213 RFX7Q2KHR2 1363 aa20.27■□□□□ 0.84
TRAM1-201ENST00000262213 OVOS2A0A0G2JMS6 1433 aa20.27■□□□□ 0.83
TRAM1-201ENST00000262213 CPLX1O14810 134 aa20.27■□□□□ 0.83
TRAM1-201ENST00000262213 TERF2Q15554 542 aa20.27■□□□□ 0.83
TRAM1-201ENST00000262213 OSBP2Q969R2 916 aa20.27■□□□□ 0.83
TRAM1-201ENST00000262213 KDM6AO15550 1401 aaPredicted RBP20.26■□□□□ 0.83
TRAM1-201ENST00000262213 LRP10Q7Z4F1 713 aa20.26■□□□□ 0.83
TRAM1-201ENST00000262213 AFDNP55196 1824 aaKnown RBP20.26■□□□□ 0.83
TRAM1-201ENST00000262213 KIF28PB7ZC32 967 aa20.26■□□□□ 0.83
TRAM1-201ENST00000262213 CSB-PGBD3P0DP91 1061 aa20.26■□□□□ 0.83
TRAM1-201ENST00000262213 PHKG2P15735 406 aa20.26■□□□□ 0.83
TRAM1-201ENST00000262213 ANKLE2Q86XL3 938 aa20.26■□□□□ 0.83
TRAM1-201ENST00000262213 CCDC150Q8NCX0 1101 aa20.26■□□□□ 0.83
TRAM1-201ENST00000262213 CCDC85AQ96PX6 553 aaPredicted RBP20.26■□□□□ 0.83
TRAM1-201ENST00000262213 IMPACTQ9P2X3 320 aa20.26■□□□□ 0.83
TRAM1-201ENST00000262213 TPM4P67936 248 aa20.25■□□□□ 0.83
TRAM1-201ENST00000262213 PUS3Q9BZE2 481 aaKnown RBP20.25■□□□□ 0.83
TRAM1-201ENST00000262213 DNAI1Q9UI46 699 aa20.25■□□□□ 0.83
TRAM1-201ENST00000262213 PALLDQ8WX93 1383 aa20.25■□□□□ 0.83
TRAM1-201ENST00000262213 PRC1O43663 620 aa20.25■□□□□ 0.83
TRAM1-201ENST00000262213 TATP17735 454 aaPredicted RBP20.25■□□□□ 0.83
TRAM1-201ENST00000262213 FOXO4P98177 505 aa20.25■□□□□ 0.83
TRAM1-201ENST00000262213 MYSM1Q5VVJ2 828 aa20.25■□□□□ 0.83
TRAM1-201ENST00000262213 FAM177A1Q8N128 213 aaPredicted RBP20.25■□□□□ 0.83
TRAM1-201ENST00000262213 KCNG4Q8TDN1 519 aa20.25■□□□□ 0.83
TRAM1-201ENST00000262213 A0A1B0GUL7 405 aa20.24■□□□□ 0.83
TRAM1-201ENST00000262213 A0A1W2PQ27 194 aa20.24■□□□□ 0.83
TRAM1-201ENST00000262213 A0A1W2PQ64 194 aa20.24■□□□□ 0.83
TRAM1-201ENST00000262213 A0A1W2PQD8 194 aa20.24■□□□□ 0.83
TRAM1-201ENST00000262213 KIF2AO00139 706 aaPredicted RBP20.24■□□□□ 0.83
TRAM1-201ENST00000262213 PFKFB1P16118 471 aa20.24■□□□□ 0.83
TRAM1-201ENST00000262213 HSP90AA4PQ58FG1 418 aa20.24■□□□□ 0.83
TRAM1-201ENST00000262213 AIFM3Q96NN9 605 aa20.24■□□□□ 0.83
TRAM1-201ENST00000262213 CASP7P55210 303 aa20.24■□□□□ 0.83
TRAM1-201ENST00000262213 NLRP12P59046 1061 aa20.24■□□□□ 0.83
TRAM1-201ENST00000262213 FANCCQ00597 558 aa20.24■□□□□ 0.83
TRAM1-201ENST00000262213 SIPA1L3O60292 1781 aaPredicted RBP20.24■□□□□ 0.83
TRAM1-201ENST00000262213 ARHGAP29Q52LW3 1261 aa20.23■□□□□ 0.83
TRAM1-201ENST00000262213 NEDD4P46934 1319 aa20.23■□□□□ 0.83
TRAM1-201ENST00000262213 NRDCO43847 1150 aa20.23■□□□□ 0.83
TRAM1-201ENST00000262213 RXRAP19793 462 aa20.23■□□□□ 0.83
TRAM1-201ENST00000262213 FBXO18Q8NFZ0 1043 aa20.23■□□□□ 0.83
TRAM1-201ENST00000262213 DPF2Q92785 391 aa20.23■□□□□ 0.83
TRAM1-201ENST00000262213 TMX1Q9H3N1 280 aa20.23■□□□□ 0.83
TRAM1-201ENST00000262213 MROH7-TTC4A0A0A0MT08 1334 aa20.23■□□□□ 0.83
TRAM1-201ENST00000262213 NCAPHQ15003 741 aa20.23■□□□□ 0.83
TRAM1-201ENST00000262213 TTLL7Q6ZT98 887 aa20.23■□□□□ 0.83
TRAM1-201ENST00000262213 ZBTB3Q9H5J0 574 aa20.23■□□□□ 0.83
TRAM1-201ENST00000262213 WDHD1O75717 1129 aaPredicted RBP20.22■□□□□ 0.83
TRAM1-201ENST00000262213 SERPINC1P01008 464 aa20.22■□□□□ 0.83
TRAM1-201ENST00000262213 ANO1Q5XXA6 986 aa20.22■□□□□ 0.83
TRAM1-201ENST00000262213 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.22■□□□□ 0.83
TRAM1-201ENST00000262213 RGPD5Q99666 1765 aa20.22■□□□□ 0.83
TRAM1-201ENST00000262213 PLBD2Q8NHP8 589 aa20.22■□□□□ 0.83
TRAM1-201ENST00000262213 CLCN6P51797 869 aa20.21■□□□□ 0.83
TRAM1-201ENST00000262213 IMMTQ16891 758 aaKnown RBP20.21■□□□□ 0.83
TRAM1-201ENST00000262213 CFAP100Q494V2 611 aa20.21■□□□□ 0.83
TRAM1-201ENST00000262213 KRT28Q7Z3Y7 464 aa20.21■□□□□ 0.83
TRAM1-201ENST00000262213 POLR3EQ9NVU0 708 aa20.21■□□□□ 0.83
TRAM1-201ENST00000262213 YEATS4O95619 227 aa20.21■□□□□ 0.83
TRAM1-201ENST00000262213 ADORA1P30542 326 aa20.21■□□□□ 0.83
TRAM1-201ENST00000262213 IFNL2Q8IZJ0 200 aa20.21■□□□□ 0.83
TRAM1-201ENST00000262213 HPS5Q9UPZ3 1129 aa20.21■□□□□ 0.83
TRAM1-201ENST00000262213 URI1O94763 535 aaPredicted RBP20.2■□□□□ 0.82
TRAM1-201ENST00000262213 FGAP02671 866 aa20.2■□□□□ 0.82
TRAM1-201ENST00000262213 IL15P40933 162 aaPredicted RBP20.2■□□□□ 0.82
TRAM1-201ENST00000262213 CABP4P57796 275 aa20.2■□□□□ 0.82
TRAM1-201ENST00000262213 RALYLQ86SE5 291 aaKnown RBP20.2■□□□□ 0.82
TRAM1-201ENST00000262213 L2HGDHQ9H9P8 463 aa20.2■□□□□ 0.82
TRAM1-201ENST00000262213 DENND2AQ9ULE3 1009 aa20.2■□□□□ 0.82
TRAM1-201ENST00000262213 PSDA5PKW4 1024 aaPredicted RBP20.2■□□□□ 0.82
TRAM1-201ENST00000262213 UBASH3AP57075 661 aa20.2■□□□□ 0.82
TRAM1-201ENST00000262213 PNOCQ13519 176 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms