RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 PDE8BO95263 885 aa10.7□□□□□ -0.7
CKAP2-201ENST00000258607 SLURP2P0DP57 97 aa10.7□□□□□ -0.7
CKAP2-201ENST00000258607 FAM47AQ5JRC9 791 aa10.7□□□□□ -0.7
CKAP2-201ENST00000258607 LINC00116Q8NCU8 138 aa10.7□□□□□ -0.7
CKAP2-201ENST00000258607 SETDB2Q96T68 719 aa10.7□□□□□ -0.7
CKAP2-201ENST00000258607 HMG20BQ9P0W2 317 aa10.7□□□□□ -0.7
CKAP2-201ENST00000258607 SAP30BPQ9UHR5 308 aaKnown RBP10.7□□□□□ -0.7
CKAP2-201ENST00000258607 PALLDQ8WX93 1383 aa10.7□□□□□ -0.7
CKAP2-201ENST00000258607 PCCAP05165 728 aaPredicted RBP10.69□□□□□ -0.7
CKAP2-201ENST00000258607 RBM10P98175 930 aaKnown RBP10.69□□□□□ -0.7
CKAP2-201ENST00000258607 SDF4Q9BRK5 362 aa10.69□□□□□ -0.7
CKAP2-201ENST00000258607 ISCA1Q9BUE6 129 aa10.69□□□□□ -0.7
CKAP2-201ENST00000258607 OVOS2A0A0G2JMS6 1433 aa10.69□□□□□ -0.7
CKAP2-201ENST00000258607 ESPNB1AK53 854 aa10.69□□□□□ -0.7
CKAP2-201ENST00000258607 EIF6P56537 245 aaKnown RBP10.69□□□□□ -0.7
CKAP2-201ENST00000258607 SLC26A6Q9BXS9 759 aa10.69□□□□□ -0.7
CKAP2-201ENST00000258607 KCNJ14Q9UNX9 436 aa10.69□□□□□ -0.7
CKAP2-201ENST00000258607 SCAF8Q9UPN6 1271 aaKnown RBP10.69□□□□□ -0.7
CKAP2-201ENST00000258607 C6orf229H3BNL8 230 aa10.69□□□□□ -0.7
CKAP2-201ENST00000258607 PDE6AP16499 860 aa10.69□□□□□ -0.7
CKAP2-201ENST00000258607 RABL6Q3YEC7 729 aaPredicted RBP10.69□□□□□ -0.7
CKAP2-201ENST00000258607 TMEM67Q5HYA8 995 aa10.69□□□□□ -0.7
CKAP2-201ENST00000258607 TXNRD3Q86VQ6 643 aa10.69□□□□□ -0.7
CKAP2-201ENST00000258607 LCORLQ8N3X6 602 aa10.69□□□□□ -0.7
CKAP2-201ENST00000258607 TSC1Q92574 1164 aa10.69□□□□□ -0.7
CKAP2-201ENST00000258607 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.69□□□□□ -0.7
CKAP2-201ENST00000258607 CPVLQ9H3G5 476 aa10.69□□□□□ -0.7
CKAP2-201ENST00000258607 DHX16O60231 1041 aaKnown RBP10.68□□□□□ -0.7
CKAP2-201ENST00000258607 NMT2O60551 498 aa10.68□□□□□ -0.7
CKAP2-201ENST00000258607 SLC5A1P13866 664 aa10.68□□□□□ -0.7
CKAP2-201ENST00000258607 DIXDC1Q155Q3 683 aa10.68□□□□□ -0.7
CKAP2-201ENST00000258607 DHX32Q7L7V1 743 aaKnown RBP10.68□□□□□ -0.7
CKAP2-201ENST00000258607 ANKRD18AQ8IVF6 992 aa10.68□□□□□ -0.7
CKAP2-201ENST00000258607 SPATA5Q8NB90 893 aa10.68□□□□□ -0.7
CKAP2-201ENST00000258607 TNMDQ9H2S6 317 aa10.68□□□□□ -0.7
CKAP2-201ENST00000258607 R3HCC1Q9Y3T6 440 aaKnown RBP10.68□□□□□ -0.7
CKAP2-201ENST00000258607 NR1I2O75469 434 aa10.68□□□□□ -0.7
CKAP2-201ENST00000258607 IL6STP40189 918 aaPredicted RBP10.68□□□□□ -0.7
CKAP2-201ENST00000258607 TBC1D10CQ8IV04 446 aa10.68□□□□□ -0.7
CKAP2-201ENST00000258607 AK7Q96M32 723 aa10.68□□□□□ -0.7
CKAP2-201ENST00000258607 DNAJC25Q9H1X3 360 aa10.68□□□□□ -0.7
CKAP2-201ENST00000258607 G3V3G9 751 aa10.68□□□□□ -0.7
CKAP2-201ENST00000258607 CCDC152Q4G0S7 254 aa10.68□□□□□ -0.7
CKAP2-201ENST00000258607 DCAF8Q5TAQ9 597 aa10.68□□□□□ -0.7
CKAP2-201ENST00000258607 INTS5Q6P9B9 1019 aaKnown RBP10.68□□□□□ -0.7
CKAP2-201ENST00000258607 VAT1LQ9HCJ6 419 aa10.68□□□□□ -0.7
CKAP2-201ENST00000258607 RPAP1Q9BWH6 1393 aaPredicted RBP10.67□□□□□ -0.7
CKAP2-201ENST00000258607 STRCP1A6NGW2 1772 aa10.67□□□□□ -0.7
CKAP2-201ENST00000258607 COBLO75128 1261 aa10.67□□□□□ -0.7
CKAP2-201ENST00000258607 PRDX5P30044 214 aa10.67□□□□□ -0.7
CKAP2-201ENST00000258607 CUL4AQ13619 759 aa10.67□□□□□ -0.7
CKAP2-201ENST00000258607 STK38Q15208 465 aa10.67□□□□□ -0.7
CKAP2-201ENST00000258607 C8orf76Q96K31 380 aa10.67□□□□□ -0.7
CKAP2-201ENST00000258607 TEX13AQ9BXU3 409 aaPredicted RBP10.67□□□□□ -0.7
CKAP2-201ENST00000258607 MRVI1Q9Y6F6 885 aa10.67□□□□□ -0.7
CKAP2-201ENST00000258607 ADAMTSL3P82987 1691 aa10.67□□□□□ -0.7
CKAP2-201ENST00000258607 MAP3K12Q12852 859 aa10.67□□□□□ -0.7
CKAP2-201ENST00000258607 PICALMQ13492 652 aa10.67□□□□□ -0.7
CKAP2-201ENST00000258607 SYAP1Q96A49 352 aaPredicted RBP10.67□□□□□ -0.7
CKAP2-201ENST00000258607 CYP2D6P10635 497 aa10.66□□□□□ -0.7
CKAP2-201ENST00000258607 HSPA1LP34931 641 aa10.66□□□□□ -0.7
CKAP2-201ENST00000258607 FILIP1Q7Z7B0 1213 aa10.66□□□□□ -0.7
CKAP2-201ENST00000258607 STAMQ92783 540 aa10.66□□□□□ -0.7
CKAP2-201ENST00000258607 USP28Q96RU2 1077 aa10.66□□□□□ -0.7
CKAP2-201ENST00000258607 RIPOR2Q9Y4F9 1068 aa10.66□□□□□ -0.7
CKAP2-201ENST00000258607 NCAPD2Q15021 1401 aa10.66□□□□□ -0.7
CKAP2-201ENST00000258607 ZMYM1Q5SVZ6 1142 aa10.66□□□□□ -0.7
CKAP2-201ENST00000258607 CYB5R4Q7L1T6 521 aa10.66□□□□□ -0.7
CKAP2-201ENST00000258607 ZNF592Q92610 1267 aa10.66□□□□□ -0.7
CKAP2-201ENST00000258607 RTCBQ9Y3I0 505 aaKnown RBP10.66□□□□□ -0.7
CKAP2-201ENST00000258607 ATP6V1DQ9Y5K8 247 aa10.66□□□□□ -0.7
CKAP2-201ENST00000258607 NFIXQ14938 502 aa10.66□□□□□ -0.7
CKAP2-201ENST00000258607 RASGRP2Q7LDG7 609 aa10.66□□□□□ -0.7
CKAP2-201ENST00000258607 GPIHBP1Q8IV16 184 aa10.66□□□□□ -0.7
CKAP2-201ENST00000258607 SPATA31A1Q5TZJ5 1347 aa10.65□□□□□ -0.7
CKAP2-201ENST00000258607 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.65□□□□□ -0.7
CKAP2-201ENST00000258607 CCDC69A6NI79 296 aa10.65□□□□□ -0.7
CKAP2-201ENST00000258607 GOLGA8AA7E2F4 631 aa10.65□□□□□ -0.7
CKAP2-201ENST00000258607 METAP2P50579 478 aaKnown RBP eCLIP10.65□□□□□ -0.7
CKAP2-201ENST00000258607 PUM3Q15397 648 aaKnown RBP10.65□□□□□ -0.7
CKAP2-201ENST00000258607 SYNE3Q6ZMZ3 975 aa10.65□□□□□ -0.7
CKAP2-201ENST00000258607 ADGRA1Q86SQ6 560 aa10.65□□□□□ -0.7
CKAP2-201ENST00000258607 NUP62CLQ9H1M0 184 aa10.65□□□□□ -0.7
CKAP2-201ENST00000258607 AOX1Q06278 1338 aa10.65□□□□□ -0.7
CKAP2-201ENST00000258607 PDIA3P30101 505 aaKnown RBP10.65□□□□□ -0.7
CKAP2-201ENST00000258607 APPBP2Q92624 585 aa10.65□□□□□ -0.7
CKAP2-201ENST00000258607 ZNF622Q969S3 477 aaKnown RBP eCLIP10.65□□□□□ -0.73e-8■■□□□ 13
CKAP2-201ENST00000258607 EEF2KMTQ96G04 330 aa10.65□□□□□ -0.7
CKAP2-201ENST00000258607 ZSCAN31Q96LW9 406 aaPredicted RBP10.65□□□□□ -0.7
CKAP2-201ENST00000258607 NLRP3Q96P20 1036 aa10.65□□□□□ -0.7
CKAP2-201ENST00000258607 MXD3Q9BW11 206 aa10.65□□□□□ -0.7
CKAP2-201ENST00000258607 TRIM5Q9C035 493 aa10.65□□□□□ -0.7
CKAP2-201ENST00000258607 SH2B1Q9NRF2 756 aaPredicted RBP10.65□□□□□ -0.7
CKAP2-201ENST00000258607 STX8Q9UNK0 236 aa10.65□□□□□ -0.7
CKAP2-201ENST00000258607 FSD2A1L4K1 749 aa10.65□□□□□ -0.71
CKAP2-201ENST00000258607 ADCY5O95622 1261 aa10.65□□□□□ -0.71
CKAP2-201ENST00000258607 MBD3O95983 291 aa10.65□□□□□ -0.71
CKAP2-201ENST00000258607 LRSAM1Q6UWE0 723 aa10.65□□□□□ -0.71
CKAP2-201ENST00000258607 HOMER1Q86YM7 354 aa10.65□□□□□ -0.71
CKAP2-201ENST00000258607 FSIP1Q8NA03 581 aa10.65□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms