RNA–Protein interactions for RNA: ENST00000258243.6

URB2-201, Transcript of URB2 ribosome biogenesis 2 homolog (S. cerevisiae), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene URB2, Length 5,613 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
URB2-201ENST00000258243 KRT27Q7Z3Y8 459 aa12.42□□□□□ -0.42
URB2-201ENST00000258243 SFPQP23246 707 aaKnown RBP eCLIP12.41□□□□□ -0.42
URB2-201ENST00000258243 PDE1AP54750 535 aa12.41□□□□□ -0.42
URB2-201ENST00000258243 DPY19L2Q6NUT2 758 aa12.41□□□□□ -0.42
URB2-201ENST00000258243 KAT6BQ8WYB5 2073 aa12.41□□□□□ -0.42
URB2-201ENST00000258243 HMGB1P1B2RPK0 211 aaPredicted RBP12.41□□□□□ -0.42
URB2-201ENST00000258243 EYA2O00167 538 aa12.41□□□□□ -0.42
URB2-201ENST00000258243 MNAT1P51948 309 aa12.41□□□□□ -0.42
URB2-201ENST00000258243 EAPPQ56P03 285 aaPredicted RBP12.41□□□□□ -0.42
URB2-201ENST00000258243 CNNM3Q8NE01 707 aa12.41□□□□□ -0.42
URB2-201ENST00000258243 CCDC102AQ96A19 550 aa12.41□□□□□ -0.42
URB2-201ENST00000258243 TRERF1Q96PN7 1200 aa12.41□□□□□ -0.42
URB2-201ENST00000258243 ZKSCAN5Q9Y2L8 839 aa12.41□□□□□ -0.42
URB2-201ENST00000258243 PPIP5K2O43314 1243 aa12.41□□□□□ -0.42
URB2-201ENST00000258243 LUZP1Q86V48 1076 aa12.41□□□□□ -0.42
URB2-201ENST00000258243 CERS3Q8IU89 383 aa12.41□□□□□ -0.42
URB2-201ENST00000258243 TIGD1Q96MW7 591 aa12.41□□□□□ -0.42
URB2-201ENST00000258243 C6orf50Q9HD87 102 aa12.41□□□□□ -0.42
URB2-201ENST00000258243 ZNF335Q9H4Z2 1342 aaPredicted RBP12.41□□□□□ -0.42
URB2-201ENST00000258243 SPDYE3A6NKU9 549 aa12.41□□□□□ -0.42
URB2-201ENST00000258243 KDM5CP41229 1560 aa12.41□□□□□ -0.42
URB2-201ENST00000258243 TCIRG1Q13488 830 aa12.41□□□□□ -0.42
URB2-201ENST00000258243 UVSSAQ2YD98 709 aa12.41□□□□□ -0.42
URB2-201ENST00000258243 KLHL10Q6JEL2 608 aa12.41□□□□□ -0.42
URB2-201ENST00000258243 ZMAT2Q96NC0 199 aaKnown RBP12.41□□□□□ -0.42
URB2-201ENST00000258243 GBP3Q9H0R5 595 aa12.41□□□□□ -0.42
URB2-201ENST00000258243 H7C1D1 291 aa12.41□□□□□ -0.42
URB2-201ENST00000258243 GJB2P29033 226 aa12.41□□□□□ -0.42
URB2-201ENST00000258243 IDEP14735 1019 aa12.4□□□□□ -0.42
URB2-201ENST00000258243 PSMD1Q99460 953 aa12.4□□□□□ -0.42
URB2-201ENST00000258243 PHKG2P15735 406 aa12.4□□□□□ -0.42
URB2-201ENST00000258243 NMIQ13287 307 aaPredicted RBP12.4□□□□□ -0.42
URB2-201ENST00000258243 ARHGAP27Q6ZUM4 889 aa12.4□□□□□ -0.42
URB2-201ENST00000258243 C2CD5Q86YS7 1000 aa12.4□□□□□ -0.42
URB2-201ENST00000258243 ZNF830Q96NB3 372 aaPredicted RBP12.4□□□□□ -0.42
URB2-201ENST00000258243 SAP30BPQ9UHR5 308 aaKnown RBP12.4□□□□□ -0.42
URB2-201ENST00000258243 JAKMIP3Q5VZ66 844 aa12.4□□□□□ -0.42
URB2-201ENST00000258243 VPS36Q86VN1 386 aa12.4□□□□□ -0.42
URB2-201ENST00000258243 CCDC24Q8N4L8 307 aa12.4□□□□□ -0.42
URB2-201ENST00000258243 LARP6Q9BRS8 491 aaKnown RBP12.4□□□□□ -0.42
URB2-201ENST00000258243 ARHGEF10LQ9HCE6 1279 aa12.4□□□□□ -0.42
URB2-201ENST00000258243 TRIM37O94972 964 aa12.4□□□□□ -0.42
URB2-201ENST00000258243 RAB3GAP1Q15042 981 aa12.4□□□□□ -0.42
URB2-201ENST00000258243 GIGYF2Q6Y7W6 1299 aaKnown RBP12.4□□□□□ -0.42
URB2-201ENST00000258243 CACNA2D4Q7Z3S7 1137 aa12.4□□□□□ -0.42
URB2-201ENST00000258243 RBM8AQ9Y5S9 174 aaKnown RBP12.4□□□□□ -0.42
URB2-201ENST00000258243 BRF1Q92994 677 aa12.39□□□□□ -0.43
URB2-201ENST00000258243 TRMT1Q9NXH9 659 aaKnown RBP12.39□□□□□ -0.43
URB2-201ENST00000258243 SEC24BO95487 1268 aa12.39□□□□□ -0.43
URB2-201ENST00000258243 BMP15O95972 392 aa12.39□□□□□ -0.43
URB2-201ENST00000258243 FERMT2Q96AC1 680 aa12.39□□□□□ -0.43
URB2-201ENST00000258243 NCBP1Q09161 790 aaKnown RBP12.39□□□□□ -0.43
URB2-201ENST00000258243 NOLC1Q14978 699 aaKnown RBP eCLIP12.39□□□□□ -0.43
URB2-201ENST00000258243 NLGN1Q8N2Q7 840 aa12.39□□□□□ -0.43
URB2-201ENST00000258243 SNX21Q969T3 373 aa12.39□□□□□ -0.43
URB2-201ENST00000258243 ANO10Q9NW15 660 aa12.39□□□□□ -0.43
URB2-201ENST00000258243 CFAP100Q494V2 611 aa12.39□□□□□ -0.43
URB2-201ENST00000258243 TAF4BQ92750 862 aa12.39□□□□□ -0.43
URB2-201ENST00000258243 CARD10Q9BWT7 1032 aa12.39□□□□□ -0.43
URB2-201ENST00000258243 MRVI1Q9Y6F6 885 aa12.39□□□□□ -0.43
URB2-201ENST00000258243 SDSP20132 328 aa12.39□□□□□ -0.43
URB2-201ENST00000258243 NAP1L3Q99457 506 aaPredicted RBP12.39□□□□□ -0.43
URB2-201ENST00000258243 EPB41L2O43491 1005 aaKnown RBP12.38□□□□□ -0.43
URB2-201ENST00000258243 URI1O94763 535 aaPredicted RBP12.38□□□□□ -0.43
URB2-201ENST00000258243 CEP85Q6P2H3 762 aa12.38□□□□□ -0.43
URB2-201ENST00000258243 METP08581 1390 aa12.38□□□□□ -0.43
URB2-201ENST00000258243 KIAA0232Q92628 1395 aa12.38□□□□□ -0.43
URB2-201ENST00000258243 PRC1O43663 620 aa12.38□□□□□ -0.43
URB2-201ENST00000258243 ZNF496Q96IT1 587 aaPredicted RBP12.38□□□□□ -0.43
URB2-201ENST00000258243 MROH5Q6ZUA9 1318 aa12.38□□□□□ -0.43
URB2-201ENST00000258243 GOLGA6L9A6NEM1 432 aa12.38□□□□□ -0.43
URB2-201ENST00000258243 ALG1Q9BT22 464 aa12.38□□□□□ -0.43
URB2-201ENST00000258243 MBD4O95243 580 aa12.38□□□□□ -0.43
URB2-201ENST00000258243 FAM193AP78312 1265 aa12.38□□□□□ -0.43
URB2-201ENST00000258243 SMC1AQ14683 1233 aaKnown RBP12.38□□□□□ -0.43
URB2-201ENST00000258243 CFAP65Q6ZU64 1925 aaKnown RBP12.38□□□□□ -0.43
URB2-201ENST00000258243 A0A1B0GUL7 405 aa12.37□□□□□ -0.43
URB2-201ENST00000258243 CTAGE5O15320 804 aa12.37□□□□□ -0.43
URB2-201ENST00000258243 GTF2F1P35269 517 aaKnown RBP eCLIP12.37□□□□□ -0.43
URB2-201ENST00000258243 DLGAP5Q15398 846 aa12.37□□□□□ -0.43
URB2-201ENST00000258243 CCDC40Q4G0X9 1142 aa12.37□□□□□ -0.43
URB2-201ENST00000258243 UNC5CLQ8IV45 518 aa12.37□□□□□ -0.43
URB2-201ENST00000258243 ERVK-7P63135 1459 aa12.37□□□□□ -0.43
URB2-201ENST00000258243 KANK3Q6NY19 840 aa12.37□□□□□ -0.43
URB2-201ENST00000258243 CCDC174Q6PII3 467 aa12.37□□□□□ -0.43
URB2-201ENST00000258243 FSIP1Q8NA03 581 aa12.37□□□□□ -0.43
URB2-201ENST00000258243 CNKSR1Q969H4 720 aa12.37□□□□□ -0.43
URB2-201ENST00000258243 PARP1P09874 1014 aaKnown RBP12.37□□□□□ -0.43
URB2-201ENST00000258243 TBC1D22AQ8WUA7 517 aa12.37□□□□□ -0.43
URB2-201ENST00000258243 IVNS1ABPQ9Y6Y0 642 aa12.37□□□□□ -0.43
URB2-201ENST00000258243 TTC37Q6PGP7 1564 aa12.37□□□□□ -0.43
URB2-201ENST00000258243 SPA17Q15506 151 aa12.37□□□□□ -0.43
URB2-201ENST00000258243 LPIN2Q92539 896 aa12.36□□□□□ -0.43
URB2-201ENST00000258243 NPC1L1Q9UHC9 1359 aa12.36□□□□□ -0.43
URB2-201ENST00000258243 STX6O43752 255 aa12.36□□□□□ -0.43
URB2-201ENST00000258243 NEMFO60524 1076 aa12.36□□□□□ -0.43
URB2-201ENST00000258243 CALML3P27482 149 aa12.36□□□□□ -0.43
URB2-201ENST00000258243 C6orf163Q5TEZ5 329 aa12.36□□□□□ -0.43
URB2-201ENST00000258243 ESYT1Q9BSJ8 1104 aa12.36□□□□□ -0.43
URB2-201ENST00000258243 UBE2HP62256 183 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms