RNA–Protein interactions for RNA: ENST00000257552.6

MSI1-201, Transcript of musashi RNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSI1, Length 2,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1-201ENST00000257552 MTX1Q13505 466 aa17.14■□□□□ 0.33
MSI1-201ENST00000257552 TEX35Q5T0J7 233 aa17.14■□□□□ 0.33
MSI1-201ENST00000257552 CCDC34Q96HJ3 373 aa17.14■□□□□ 0.33
MSI1-201ENST00000257552 ORC3Q9UBD5 711 aaPredicted RBP17.14■□□□□ 0.33
MSI1-201ENST00000257552 KDM3BQ7LBC6 1761 aa17.13■□□□□ 0.33
MSI1-201ENST00000257552 APOBRQ0VD83 1088 aa17.13■□□□□ 0.33
MSI1-201ENST00000257552 ALDH8A1Q9H2A2 487 aaPredicted RBP17.13■□□□□ 0.33
MSI1-201ENST00000257552 TAOK2Q9UL54 1235 aa17.13■□□□□ 0.33
MSI1-201ENST00000257552 KIF1AQ12756 1690 aa17.13■□□□□ 0.33
MSI1-201ENST00000257552 ALS2Q96Q42 1657 aa17.13■□□□□ 0.33
MSI1-201ENST00000257552 CCDC150Q8NCX0 1101 aa17.13■□□□□ 0.33
MSI1-201ENST00000257552 PCDHA7Q9UN72 937 aa17.13■□□□□ 0.33
MSI1-201ENST00000257552 PHRF1Q9P1Y6 1649 aaKnown RBP17.13■□□□□ 0.33
MSI1-201ENST00000257552 CYP21A2P08686 494 aa17.13■□□□□ 0.33
MSI1-201ENST00000257552 SNRPA1P09661 255 aaKnown RBP17.13■□□□□ 0.33
MSI1-201ENST00000257552 NDUFA8P51970 172 aa17.13■□□□□ 0.33
MSI1-201ENST00000257552 GYS2P54840 703 aa17.13■□□□□ 0.33
MSI1-201ENST00000257552 ETF1P62495 437 aaKnown RBP17.13■□□□□ 0.33
MSI1-201ENST00000257552 NEXNQ0ZGT2 675 aa17.13■□□□□ 0.33
MSI1-201ENST00000257552 EPHA10Q5JZY3 1008 aa17.13■□□□□ 0.33
MSI1-201ENST00000257552 OTUD7BQ6GQQ9 843 aa17.13■□□□□ 0.33
MSI1-201ENST00000257552 ANKRD13DQ6ZTN6 518 aa17.13■□□□□ 0.33
MSI1-201ENST00000257552 NSUN7Q8NE18 718 aaKnown RBP17.13■□□□□ 0.33
MSI1-201ENST00000257552 SMARCE1Q969G3 411 aa17.13■□□□□ 0.33
MSI1-201ENST00000257552 IMPACTQ9P2X3 320 aa17.13■□□□□ 0.33
MSI1-201ENST00000257552 NRDCO43847 1150 aa17.12■□□□□ 0.33
MSI1-201ENST00000257552 ZRANB2O95218 330 aaKnown RBP eCLIP17.12■□□□□ 0.33
MSI1-201ENST00000257552 KRT32Q14532 448 aa17.12■□□□□ 0.33
MSI1-201ENST00000257552 SF3A1Q15459 793 aaKnown RBP17.12■□□□□ 0.33
MSI1-201ENST00000257552 KRBA2Q6ZNG9 492 aa17.12■□□□□ 0.33
MSI1-201ENST00000257552 KCND1Q9NSA2 647 aa17.12■□□□□ 0.33
MSI1-201ENST00000257552 FEZ2Q9UHY8 353 aaPredicted RBP17.12■□□□□ 0.33
MSI1-201ENST00000257552 PSDA5PKW4 1024 aaPredicted RBP17.12■□□□□ 0.33
MSI1-201ENST00000257552 CTDNEP1O95476 244 aa17.12■□□□□ 0.33
MSI1-201ENST00000257552 GNL2Q13823 731 aaKnown RBP17.12■□□□□ 0.33
MSI1-201ENST00000257552 CHST3Q7LGC8 479 aa17.12■□□□□ 0.33
MSI1-201ENST00000257552 ZNF396Q96N95 335 aaPredicted RBP17.12■□□□□ 0.33
MSI1-201ENST00000257552 MED23Q9ULK4 1368 aa17.12■□□□□ 0.33
MSI1-201ENST00000257552 ALDH1L1O75891 902 aa17.11■□□□□ 0.33
MSI1-201ENST00000257552 UBE3BQ7Z3V4 1068 aa17.11■□□□□ 0.33
MSI1-201ENST00000257552 ZCRB1Q8TBF4 217 aaKnown RBP17.11■□□□□ 0.33
MSI1-201ENST00000257552 MRPS27Q92552 414 aaKnown RBP17.11■□□□□ 0.33
MSI1-201ENST00000257552 ZFP91Q96JP5 570 aaPredicted RBP17.11■□□□□ 0.33
MSI1-201ENST00000257552 COL15A1P39059 1388 aa17.11■□□□□ 0.33
MSI1-201ENST00000257552 FANCGO15287 622 aa17.11■□□□□ 0.33
MSI1-201ENST00000257552 ATP1A3P13637 1013 aa17.11■□□□□ 0.33
MSI1-201ENST00000257552 TPM4P67936 248 aa17.11■□□□□ 0.33
MSI1-201ENST00000257552 CREBRFQ8IUR6 639 aa17.11■□□□□ 0.33
MSI1-201ENST00000257552 FMR1NBQ8N0W7 255 aaPredicted RBP17.11■□□□□ 0.33
MSI1-201ENST00000257552 CACNA1FO60840 1977 aa17.11■□□□□ 0.33
MSI1-201ENST00000257552 NEURL1BA8MQ27 555 aa17.1■□□□□ 0.33
MSI1-201ENST00000257552 SASH3O75995 380 aa17.1■□□□□ 0.33
MSI1-201ENST00000257552 FAM193AP78312 1265 aa17.1■□□□□ 0.33
MSI1-201ENST00000257552 TSGA10IPQ3SY00 556 aa17.1■□□□□ 0.33
MSI1-201ENST00000257552 UTP14AQ9BVJ6 771 aaKnown RBP17.1■□□□□ 0.33
MSI1-201ENST00000257552 KIAA1468Q9P260 1216 aa17.1■□□□□ 0.33
MSI1-201ENST00000257552 DCCP43146 1447 aa17.1■□□□□ 0.33
MSI1-201ENST00000257552 A1BGP04217 495 aa17.1■□□□□ 0.33
MSI1-201ENST00000257552 POLR3DP05423 398 aaPredicted RBP17.1■□□□□ 0.33
MSI1-201ENST00000257552 OAS2P29728 719 aaKnown RBP17.1■□□□□ 0.33
MSI1-201ENST00000257552 SMARCC2Q8TAQ2 1214 aa17.1■□□□□ 0.33
MSI1-201ENST00000257552 SNRKQ9NRH2 765 aa17.1■□□□□ 0.33
MSI1-201ENST00000257552 EVCP57679 992 aa17.1■□□□□ 0.33
MSI1-201ENST00000257552 NAA16Q6N069 864 aaPredicted RBP17.1■□□□□ 0.33
MSI1-201ENST00000257552 STOX1Q6ZVD7 989 aa17.1■□□□□ 0.33
MSI1-201ENST00000257552 ILDR1Q86SU0 546 aaPredicted RBP17.1■□□□□ 0.33
MSI1-201ENST00000257552 GCKRQ14397 625 aa17.09■□□□□ 0.33
MSI1-201ENST00000257552 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.09■□□□□ 0.33
MSI1-201ENST00000257552 CERS3Q8IU89 383 aa17.09■□□□□ 0.33
MSI1-201ENST00000257552 WDR17Q8IZU2 1322 aa17.09■□□□□ 0.33
MSI1-201ENST00000257552 PFKFB2O60825 505 aa17.08■□□□□ 0.33
MSI1-201ENST00000257552 TADA3O75528 432 aa17.08■□□□□ 0.33
MSI1-201ENST00000257552 TNNT3P45378 269 aaPredicted RBP17.08■□□□□ 0.33
MSI1-201ENST00000257552 A0A0G2JS52 829 aa17.08■□□□□ 0.32
MSI1-201ENST00000257552 FANCCQ00597 558 aa17.08■□□□□ 0.32
MSI1-201ENST00000257552 STK38Q15208 465 aa17.08■□□□□ 0.32
MSI1-201ENST00000257552 ZBTB3Q9H5J0 574 aa17.08■□□□□ 0.32
MSI1-201ENST00000257552 CLIC4Q9Y696 253 aa17.08■□□□□ 0.32
MSI1-201ENST00000257552 KAT6BQ8WYB5 2073 aa17.07■□□□□ 0.32
MSI1-201ENST00000257552 SLC3A2P08195 630 aaKnown RBP17.07■□□□□ 0.32
MSI1-201ENST00000257552 SLC20A2Q08357 652 aa17.07■□□□□ 0.32
MSI1-201ENST00000257552 USPL1Q5W0Q7 1092 aa17.07■□□□□ 0.32
MSI1-201ENST00000257552 TRIM65Q6PJ69 517 aa17.07■□□□□ 0.32
MSI1-201ENST00000257552 TTLL7Q6ZT98 887 aa17.07■□□□□ 0.32
MSI1-201ENST00000257552 DDX46Q7L014 1031 aaKnown RBP17.07■□□□□ 0.32
MSI1-201ENST00000257552 DPF2Q92785 391 aa17.07■□□□□ 0.32
MSI1-201ENST00000257552 A0A087WZG4 1122 aa17.07■□□□□ 0.32
MSI1-201ENST00000257552 A0A0G2JLW4 131 aa17.07■□□□□ 0.32
MSI1-201ENST00000257552 SMC1AQ14683 1233 aaKnown RBP17.07■□□□□ 0.32
MSI1-201ENST00000257552 METTL22Q9BUU2 404 aaPredicted RBP17.07■□□□□ 0.32
MSI1-201ENST00000257552 TBC1D8O95759 1140 aa17.07■□□□□ 0.32
MSI1-201ENST00000257552 HSP90AA4PQ58FG1 418 aa17.07■□□□□ 0.32
MSI1-201ENST00000257552 TXLNBQ8N3L3 684 aa17.07■□□□□ 0.32
MSI1-201ENST00000257552 CAMTA1Q9Y6Y1 1673 aa17.06■□□□□ 0.32
MSI1-201ENST00000257552 NBPF26B4DH59 902 aa17.06■□□□□ 0.32
MSI1-201ENST00000257552 TRIM66O15016 1216 aa17.06■□□□□ 0.32
MSI1-201ENST00000257552 SERPINC1P01008 464 aa17.06■□□□□ 0.32
MSI1-201ENST00000257552 NBPF14Q5TI25 921 aa17.06■□□□□ 0.32
MSI1-201ENST00000257552 NBPF10Q6P3W6 841 aaKnown RBP17.06■□□□□ 0.32
MSI1-201ENST00000257552 C10orf67Q8IYJ2 551 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms