RNA–Protein interactions for RNA: ENST00000254941.6

NIP7-202, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 1 (best) BASIC

Gene NIP7, Length 1,887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-202ENST00000254941 PTH1RQ03431 593 aa11.38□□□□□ -0.59
NIP7-202ENST00000254941 MAP4K1Q92918 833 aa11.38□□□□□ -0.59
NIP7-202ENST00000254941 SEC62Q99442 399 aaKnown RBP11.38□□□□□ -0.59
NIP7-202ENST00000254941 PIH1D3Q9NQM4 214 aaKnown RBP11.38□□□□□ -0.59
NIP7-202ENST00000254941 NSFL1CQ9UNZ2 370 aaKnown RBP11.38□□□□□ -0.59
NIP7-202ENST00000254941 PDS5AQ29RF7 1337 aaKnown RBP11.38□□□□□ -0.59
NIP7-202ENST00000254941 C10orf71Q711Q0 1435 aa11.38□□□□□ -0.59
NIP7-202ENST00000254941 ATP2B4P23634 1241 aa11.38□□□□□ -0.59
NIP7-202ENST00000254941 STYK1Q6J9G0 422 aa11.38□□□□□ -0.59
NIP7-202ENST00000254941 ZSCAN25Q6NSZ9 544 aa11.38□□□□□ -0.59
NIP7-202ENST00000254941 TXNRD3Q86VQ6 643 aa11.38□□□□□ -0.59
NIP7-202ENST00000254941 C2CD5Q86YS7 1000 aa11.38□□□□□ -0.59
NIP7-202ENST00000254941 DENND2AQ9ULE3 1009 aa11.38□□□□□ -0.59
NIP7-202ENST00000254941 COL1A1P02452 1464 aaPredicted RBP11.37□□□□□ -0.59
NIP7-202ENST00000254941 IDH1O75874 414 aaKnown RBP11.37□□□□□ -0.59
NIP7-202ENST00000254941 ADD2P35612 726 aa11.37□□□□□ -0.59
NIP7-202ENST00000254941 RABEP1Q15276 862 aa11.37□□□□□ -0.59
NIP7-202ENST00000254941 SLFNL1Q499Z3 407 aa11.37□□□□□ -0.59
NIP7-202ENST00000254941 APPBP2Q92624 585 aa11.37□□□□□ -0.59
NIP7-202ENST00000254941 GGA1Q9UJY5 639 aa11.37□□□□□ -0.59
NIP7-202ENST00000254941 CHD4Q14839 1912 aa11.36□□□□□ -0.59
NIP7-202ENST00000254941 UFL1O94874 794 aa11.36□□□□□ -0.59
NIP7-202ENST00000254941 BECN1Q14457 450 aa11.36□□□□□ -0.59
NIP7-202ENST00000254941 NECTIN1Q15223 517 aa11.36□□□□□ -0.59
NIP7-202ENST00000254941 UBE3CQ15386 1083 aa11.36□□□□□ -0.59
NIP7-202ENST00000254941 SLC9C2Q5TAH2 1124 aa11.36□□□□□ -0.59
NIP7-202ENST00000254941 OSBP2Q969R2 916 aa11.36□□□□□ -0.59
NIP7-202ENST00000254941 PALD1Q9ULE6 856 aa11.36□□□□□ -0.59
NIP7-202ENST00000254941 IQSEC3Q9UPP2 1182 aaPredicted RBP11.36□□□□□ -0.59
NIP7-202ENST00000254941 MAST3O60307 1309 aa11.36□□□□□ -0.59
NIP7-202ENST00000254941 DUOX1Q9NRD9 1551 aa11.36□□□□□ -0.59
NIP7-202ENST00000254941 MAP3K12Q12852 859 aa11.36□□□□□ -0.59
NIP7-202ENST00000254941 WASHC4Q2M389 1173 aa11.36□□□□□ -0.59
NIP7-202ENST00000254941 CCDC129Q6ZRS4 1044 aa11.36□□□□□ -0.59
NIP7-202ENST00000254941 TBC1D16Q8TBP0 767 aa11.36□□□□□ -0.59
NIP7-202ENST00000254941 KCNB2Q92953 911 aa11.36□□□□□ -0.59
NIP7-202ENST00000254941 ZNF622Q969S3 477 aaKnown RBP eCLIP11.36□□□□□ -0.59
NIP7-202ENST00000254941 SNX21Q969T3 373 aa11.36□□□□□ -0.59
NIP7-202ENST00000254941 POLLQ9UGP5 575 aa11.36□□□□□ -0.59
NIP7-202ENST00000254941 RBM8AQ9Y5S9 174 aaKnown RBP11.36□□□□□ -0.59
NIP7-202ENST00000254941 TCRBV5S4A2TA0A5A2 114 aa11.35□□□□□ -0.59
NIP7-202ENST00000254941 PDE6AP16499 860 aa11.35□□□□□ -0.59
NIP7-202ENST00000254941 CHRNA5P30532 468 aa11.35□□□□□ -0.59
NIP7-202ENST00000254941 ZNF804AQ7Z570 1209 aa11.35□□□□□ -0.59
NIP7-202ENST00000254941 CNKSR1Q969H4 720 aa11.35□□□□□ -0.59
NIP7-202ENST00000254941 TBC1D2Q9BYX2 928 aa11.35□□□□□ -0.59
NIP7-202ENST00000254941 MTFR1LQ9H019 292 aa11.35□□□□□ -0.59
NIP7-202ENST00000254941 PUS7LQ9H0K6 701 aaKnown RBP11.35□□□□□ -0.59
NIP7-202ENST00000254941 WWC3Q9ULE0 1092 aa11.35□□□□□ -0.59
NIP7-202ENST00000254941 KIAA1551Q9HCM1 1747 aa11.34□□□□□ -0.59
NIP7-202ENST00000254941 M0R2C6 588 aa11.34□□□□□ -0.59
NIP7-202ENST00000254941 FRAT2O75474 233 aaPredicted RBP11.34□□□□□ -0.59
NIP7-202ENST00000254941 PRPF40BQ6NWY9 871 aaKnown RBP11.34□□□□□ -0.59
NIP7-202ENST00000254941 TDRD7Q8NHU6 1098 aaKnown RBP11.34□□□□□ -0.59
NIP7-202ENST00000254941 DSCC1Q9BVC3 393 aa11.34□□□□□ -0.59
NIP7-202ENST00000254941 TMX4Q9H1E5 349 aaPredicted RBP11.34□□□□□ -0.59
NIP7-202ENST00000254941 LRP2BPQ9P2M1 347 aa11.34□□□□□ -0.59
NIP7-202ENST00000254941 DAXXQ9UER7 740 aaPredicted RBP11.34□□□□□ -0.59
NIP7-202ENST00000254941 SNX14Q9Y5W7 946 aa11.34□□□□□ -0.59
NIP7-202ENST00000254941 MAST2Q6P0Q8 1798 aa11.34□□□□□ -0.59
NIP7-202ENST00000254941 ZNF532Q9HCE3 1301 aa11.34□□□□□ -0.59
NIP7-202ENST00000254941 ZBTB7AO95365 584 aa11.34□□□□□ -0.59
NIP7-202ENST00000254941 RASEFQ8IZ41 740 aa11.34□□□□□ -0.59
NIP7-202ENST00000254941 MPNDQ8N594 471 aa11.34□□□□□ -0.59
NIP7-202ENST00000254941 MAGEB6Q8N7X4 407 aa11.34□□□□□ -0.59
NIP7-202ENST00000254941 IL27Q8NEV9 243 aa11.34□□□□□ -0.59
NIP7-202ENST00000254941 LAMA4Q16363 1823 aa11.33□□□□□ -0.6
NIP7-202ENST00000254941 C6orf229H3BNL8 230 aa11.33□□□□□ -0.6
NIP7-202ENST00000254941 HSPD1P10809 573 aaKnown RBP11.33□□□□□ -0.6
NIP7-202ENST00000254941 IL1R1P14778 569 aa11.33□□□□□ -0.6
NIP7-202ENST00000254941 BRCA1P38398 1863 aaKnown RBP11.33□□□□□ -0.6
NIP7-202ENST00000254941 R3HDM1Q15032 1099 aaKnown RBP11.33□□□□□ -0.6
NIP7-202ENST00000254941 VPS53Q5VIR6 699 aa11.33□□□□□ -0.6
NIP7-202ENST00000254941 RNF20Q5VTR2 975 aa11.33□□□□□ -0.6
NIP7-202ENST00000254941 CREB3L3Q68CJ9 461 aa11.33□□□□□ -0.6
NIP7-202ENST00000254941 OLFM4Q6UX06 510 aa11.33□□□□□ -0.6
NIP7-202ENST00000254941 GPR101Q96P66 508 aaPredicted RBP11.33□□□□□ -0.6
NIP7-202ENST00000254941 ABCF2Q9UG63 623 aa11.33□□□□□ -0.6
NIP7-202ENST00000254941 SLC27A2O14975 620 aa11.32□□□□□ -0.6
NIP7-202ENST00000254941 GPAA1O43292 621 aa11.32□□□□□ -0.6
NIP7-202ENST00000254941 IGSF3O75054 1194 aa11.32□□□□□ -0.6
NIP7-202ENST00000254941 CD2BP2O95400 341 aaKnown RBP11.32□□□□□ -0.6
NIP7-202ENST00000254941 ZKSCAN1P17029 563 aaPredicted RBP11.32□□□□□ -0.6
NIP7-202ENST00000254941 SLC4A3P48751 1232 aa11.32□□□□□ -0.6
NIP7-202ENST00000254941 TSGA10IPQ3SY00 556 aa11.32□□□□□ -0.6
NIP7-202ENST00000254941 DPP8Q6V1X1 898 aaPredicted RBP11.32□□□□□ -0.6
NIP7-202ENST00000254941 HSCBQ8IWL3 235 aa11.32□□□□□ -0.6
NIP7-202ENST00000254941 C7orf43Q8WVR3 580 aa11.32□□□□□ -0.6
NIP7-202ENST00000254941 CD209Q9NNX6 404 aa11.32□□□□□ -0.6
NIP7-202ENST00000254941 SALL1Q9NSC2 1324 aa11.32□□□□□ -0.6
NIP7-202ENST00000254941 MYH2Q9UKX2 1941 aa11.32□□□□□ -0.6
NIP7-202ENST00000254941 FOXP2O15409 715 aa11.32□□□□□ -0.6
NIP7-202ENST00000254941 ST18O60284 1047 aa11.32□□□□□ -0.6
NIP7-202ENST00000254941 POLD1P28340 1107 aa11.32□□□□□ -0.6
NIP7-202ENST00000254941 NEK4P51957 841 aa11.32□□□□□ -0.6
NIP7-202ENST00000254941 TMED8Q6PL24 325 aaPredicted RBP11.32□□□□□ -0.6
NIP7-202ENST00000254941 ZGPATQ8N5A5 531 aaKnown RBP11.32□□□□□ -0.6
NIP7-202ENST00000254941 WDR66Q8TBY9 1149 aa11.32□□□□□ -0.6
NIP7-202ENST00000254941 ATF5Q9Y2D1 282 aaPredicted RBP11.32□□□□□ -0.6
NIP7-202ENST00000254941 SNED1Q8TER0 1413 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms