RNA–Protein interactions for RNA: ENST00000254193.10

SNRPA1-201, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA1, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-201ENST00000254193 TFCP2Q12800 502 aa22.29■■□□□ 1.16
SNRPA1-201ENST00000254193 SCARF1Q14162 830 aa22.29■■□□□ 1.16
SNRPA1-201ENST00000254193 FAM205AQ6ZU69 1335 aa22.29■■□□□ 1.16
SNRPA1-201ENST00000254193 F8W031 263 aaPredicted RBP22.28■■□□□ 1.16
SNRPA1-201ENST00000254193 DLK2Q6UY11 383 aa22.28■■□□□ 1.16
SNRPA1-201ENST00000254193 USP48Q86UV5 1035 aa22.28■■□□□ 1.16
SNRPA1-201ENST00000254193 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.28■■□□□ 1.16
SNRPA1-201ENST00000254193 SSH3Q8TE77 659 aa22.28■■□□□ 1.16
SNRPA1-201ENST00000254193 CREBZFQ9NS37 354 aa22.28■■□□□ 1.16
SNRPA1-201ENST00000254193 FRAT2O75474 233 aaPredicted RBP22.27■■□□□ 1.16
SNRPA1-201ENST00000254193 CHAF1AQ13111 956 aaPredicted RBP22.27■■□□□ 1.16
SNRPA1-201ENST00000254193 G3BP1Q13283 466 aaKnown RBP eCLIP22.27■■□□□ 1.16
SNRPA1-201ENST00000254193 CDC37L1Q7L3B6 337 aa22.27■■□□□ 1.16
SNRPA1-201ENST00000254193 KRT26Q7Z3Y9 468 aa22.27■■□□□ 1.16
SNRPA1-201ENST00000254193 DCPSQ96C86 337 aaKnown RBP22.27■■□□□ 1.16
SNRPA1-201ENST00000254193 GGA3Q9NZ52 723 aa22.27■■□□□ 1.16
SNRPA1-201ENST00000254193 HDAC9Q9UKV0 1011 aa22.27■■□□□ 1.16
SNRPA1-201ENST00000254193 DDX19BQ9UMR2 479 aa22.27■■□□□ 1.16
SNRPA1-201ENST00000254193 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.27■■□□□ 1.16
SNRPA1-201ENST00000254193 A0A1B0GUL6 1792 aa22.27■■□□□ 1.16
SNRPA1-201ENST00000254193 TMEM88BA6NKF7 163 aa22.26■■□□□ 1.15
SNRPA1-201ENST00000254193 FKBP1AP62942 108 aaKnown RBP22.26■■□□□ 1.15
SNRPA1-201ENST00000254193 NBPF9Q3BBW0 867 aa22.26■■□□□ 1.15
SNRPA1-201ENST00000254193 MFSD14BQ5SR56 506 aa22.26■■□□□ 1.15
SNRPA1-201ENST00000254193 CEP85Q6P2H3 762 aa22.26■■□□□ 1.15
SNRPA1-201ENST00000254193 ADORA1P30542 326 aa22.25■■□□□ 1.15
SNRPA1-201ENST00000254193 TIMM10P62072 90 aa22.25■■□□□ 1.15
SNRPA1-201ENST00000254193 PDE3AQ14432 1141 aa22.25■■□□□ 1.15
SNRPA1-201ENST00000254193 ANGEL2Q5VTE6 544 aaKnown RBP22.25■■□□□ 1.15
SNRPA1-201ENST00000254193 ADM5C9JUS6 153 aa22.24■■□□□ 1.15
SNRPA1-201ENST00000254193 SURF6O75683 361 aaKnown RBP22.24■■□□□ 1.15
SNRPA1-201ENST00000254193 CST9Q5W186 159 aa22.24■■□□□ 1.15
SNRPA1-201ENST00000254193 ZBTB40Q9NUA8 1239 aa22.24■■□□□ 1.15
SNRPA1-201ENST00000254193 WNT10BO00744 389 aa22.23■■□□□ 1.15
SNRPA1-201ENST00000254193 MMP14P50281 582 aa22.23■■□□□ 1.15
SNRPA1-201ENST00000254193 GRIK5Q16478 980 aa22.23■■□□□ 1.15
SNRPA1-201ENST00000254193 KLRG1Q96E93 195 aa22.23■■□□□ 1.15
SNRPA1-201ENST00000254193 AKAP2Q9Y2D5 859 aa22.23■■□□□ 1.15
SNRPA1-201ENST00000254193 PCDHAC2Q9Y5I4 1007 aa22.23■■□□□ 1.15
SNRPA1-201ENST00000254193 A0A1B0GUL7 405 aa22.22■■□□□ 1.15
SNRPA1-201ENST00000254193 CELF2O95319 508 aaKnown RBP22.22■■□□□ 1.15
SNRPA1-201ENST00000254193 PHKA1P46020 1223 aa22.22■■□□□ 1.15
SNRPA1-201ENST00000254193 OS9Q13438 667 aaPredicted RBP22.22■■□□□ 1.15
SNRPA1-201ENST00000254193 SULF1Q8IWU6 871 aa22.22■■□□□ 1.15
SNRPA1-201ENST00000254193 ZBED3Q96IU2 234 aaPredicted RBP22.22■■□□□ 1.15
SNRPA1-201ENST00000254193 ZNF408Q9H9D4 720 aa22.22■■□□□ 1.15
SNRPA1-201ENST00000254193 SCAF8Q9UPN6 1271 aaKnown RBP22.22■■□□□ 1.15
SNRPA1-201ENST00000254193 DLGAP5Q15398 846 aa22.21■■□□□ 1.15
SNRPA1-201ENST00000254193 XAGE2Q96GT9 111 aa22.21■■□□□ 1.15
SNRPA1-201ENST00000254193 NEUROD6Q96NK8 337 aa22.21■■□□□ 1.15
SNRPA1-201ENST00000254193 GNL3LQ9NVN8 582 aaKnown RBP22.21■■□□□ 1.15
SNRPA1-201ENST00000254193 MKRN1Q9UHC7 482 aaKnown RBP22.21■■□□□ 1.15
SNRPA1-201ENST00000254193 TTF2Q9UNY4 1162 aaKnown RBP22.21■■□□□ 1.15
SNRPA1-201ENST00000254193 NOP58Q9Y2X3 529 aaKnown RBP22.21■■□□□ 1.15
SNRPA1-201ENST00000254193 CFAP100Q494V2 611 aa22.2■■□□□ 1.14
SNRPA1-201ENST00000254193 CCDC102BQ68D86 513 aa22.2■■□□□ 1.14
SNRPA1-201ENST00000254193 TBC1D22AQ8WUA7 517 aa22.2■■□□□ 1.14
SNRPA1-201ENST00000254193 ABT1Q9ULW3 272 aaKnown RBP22.2■■□□□ 1.14
SNRPA1-201ENST00000254193 PSME4Q14997 1843 aa22.2■■□□□ 1.14
SNRPA1-201ENST00000254193 RBM5P52756 815 aaKnown RBP eCLIP22.19■■□□□ 1.146e-6■□□□□ 9
SNRPA1-201ENST00000254193 MTMR14Q8NCE2 650 aa22.19■■□□□ 1.14
SNRPA1-201ENST00000254193 CHMP4BQ9H444 224 aaKnown RBP22.19■■□□□ 1.14
SNRPA1-201ENST00000254193 CEP350Q5VT06 3117 aa22.18■■□□□ 1.14
SNRPA1-201ENST00000254193 PITPNM2Q9BZ72 1349 aa22.18■■□□□ 1.14
SNRPA1-201ENST00000254193 PRMT6Q96LA8 375 aaPredicted RBP22.18■■□□□ 1.14
SNRPA1-201ENST00000254193 ZNF646O15015 1829 aaPredicted RBP22.17■■□□□ 1.14
SNRPA1-201ENST00000254193 AOX1Q06278 1338 aa22.17■■□□□ 1.14
SNRPA1-201ENST00000254193 SPDYE2BA6NHP3 402 aa22.17■■□□□ 1.14
SNRPA1-201ENST00000254193 SPDYE6P0CI01 402 aa22.17■■□□□ 1.14
SNRPA1-201ENST00000254193 SIRT2Q8IXJ6 389 aa22.17■■□□□ 1.14
SNRPA1-201ENST00000254193 RPAP2Q8IXW5 612 aaPredicted RBP22.17■■□□□ 1.14
SNRPA1-201ENST00000254193 WDR66Q8TBY9 1149 aa22.17■■□□□ 1.14
SNRPA1-201ENST00000254193 COL1A1P02452 1464 aaPredicted RBP22.16■■□□□ 1.14
SNRPA1-201ENST00000254193 RRP1P56182 461 aaKnown RBP22.16■■□□□ 1.14
SNRPA1-201ENST00000254193 GORABQ5T7V8 394 aa22.16■■□□□ 1.14
SNRPA1-201ENST00000254193 CDCA5Q96FF9 252 aa22.16■■□□□ 1.14
SNRPA1-201ENST00000254193 SERPINA10Q9UK55 444 aa22.16■■□□□ 1.14
SNRPA1-201ENST00000254193 DENND2AQ9ULE3 1009 aa22.16■■□□□ 1.14
SNRPA1-201ENST00000254193 EXOC6BQ9Y2D4 811 aa22.16■■□□□ 1.14
SNRPA1-201ENST00000254193 CNTNAP1P78357 1384 aa22.15■■□□□ 1.14
SNRPA1-201ENST00000254193 CLRN2A0PK11 232 aa22.15■■□□□ 1.14
SNRPA1-201ENST00000254193 SEMA3EO15041 775 aa22.15■■□□□ 1.14
SNRPA1-201ENST00000254193 CRKP46108 304 aa22.15■■□□□ 1.14
SNRPA1-201ENST00000254193 RASGRF1Q13972 1273 aa22.15■■□□□ 1.14
SNRPA1-201ENST00000254193 TNNI3KQ59H18 835 aa22.15■■□□□ 1.14
SNRPA1-201ENST00000254193 PRAMEF18Q5VWM3 479 aa22.15■■□□□ 1.14
SNRPA1-201ENST00000254193 TLL2Q9Y6L7 1015 aa22.15■■□□□ 1.14
SNRPA1-201ENST00000254193 FPGT-TNNI3KV9GXZ4 949 aa22.15■■□□□ 1.14
SNRPA1-201ENST00000254193 RASSF10A6NK89 507 aa22.14■■□□□ 1.13
SNRPA1-201ENST00000254193 DEFB115Q30KQ5 88 aa22.14■■□□□ 1.13
SNRPA1-201ENST00000254193 GPR108Q9NPR9 543 aa22.14■■□□□ 1.13
SNRPA1-201ENST00000254193 SUGT1Q9Y2Z0 365 aa22.14■■□□□ 1.13
SNRPA1-201ENST00000254193 HMMRO75330 724 aa22.13■■□□□ 1.13
SNRPA1-201ENST00000254193 VEGFBP49765 207 aa22.13■■□□□ 1.13
SNRPA1-201ENST00000254193 SAPCD2Q86UD0 394 aa22.13■■□□□ 1.13
SNRPA1-201ENST00000254193 MYO1BO43795 1136 aa22.12■■□□□ 1.13
SNRPA1-201ENST00000254193 HDLBPQ00341 1268 aaKnown RBP22.12■■□□□ 1.13
SNRPA1-201ENST00000254193 APOBEC3FQ8IUX4 373 aaKnown RBP22.12■■□□□ 1.13
SNRPA1-201ENST00000254193 JMYQ8N9B5 988 aa22.12■■□□□ 1.13
SNRPA1-201ENST00000254193 DBNDD2Q9BQY9 259 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms