RNA–Protein interactions for RNA: ENST00000252622.14

LSM7-201, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM7, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-201ENST00000252622 SSH3Q8TE77 659 aa31.13■■■□□ 2.57
LSM7-201ENST00000252622 HDAC9Q9UKV0 1011 aa31.13■■■□□ 2.57
LSM7-201ENST00000252622 DNAJC5GQ8N7S2 189 aa31.12■■■□□ 2.57
LSM7-201ENST00000252622 GLIS2Q9BZE0 524 aaPredicted RBP31.12■■■□□ 2.57
LSM7-201ENST00000252622 DDX19BQ9UMR2 479 aa31.12■■■□□ 2.57
LSM7-201ENST00000252622 TMEM88BA6NKF7 163 aa31.11■■■□□ 2.57
LSM7-201ENST00000252622 BCAMP50895 628 aa31.11■■■□□ 2.57
LSM7-201ENST00000252622 PDE3AQ14432 1141 aa31.11■■■□□ 2.57
LSM7-201ENST00000252622 JAG2Q9Y219 1238 aa31.11■■■□□ 2.57
LSM7-201ENST00000252622 TRAF5O00463 557 aa31.1■■■□□ 2.57
LSM7-201ENST00000252622 SCARF1Q14162 830 aa31.1■■■□□ 2.57
LSM7-201ENST00000252622 DCPSQ96C86 337 aaKnown RBP31.1■■■□□ 2.57
LSM7-201ENST00000252622 GGA3Q9NZ52 723 aa31.1■■■□□ 2.57
LSM7-201ENST00000252622 COG6Q9Y2V7 657 aa31.1■■■□□ 2.57
LSM7-201ENST00000252622 ARAP2Q8WZ64 1704 aa31.1■■■□□ 2.57
LSM7-201ENST00000252622 G3BP1Q13283 466 aaKnown RBP eCLIP31.08■■■□□ 2.57
LSM7-201ENST00000252622 MFSD14BQ5SR56 506 aa31.08■■■□□ 2.57
LSM7-201ENST00000252622 IQSEC3Q9UPP2 1182 aaPredicted RBP31.08■■■□□ 2.57
LSM7-201ENST00000252622 ASTN2O75129 1339 aaPredicted RBP31.07■■■□□ 2.56
LSM7-201ENST00000252622 PITPNM2Q9BZ72 1349 aa31.07■■■□□ 2.56
LSM7-201ENST00000252622 FMR1Q06787 632 aaKnown RBP eCLIP31.07■■■□□ 2.56
LSM7-201ENST00000252622 TFCP2Q12800 502 aa31.07■■■□□ 2.56
LSM7-201ENST00000252622 CEP85Q6P2H3 762 aa31.07■■■□□ 2.56
LSM7-201ENST00000252622 KRT26Q7Z3Y9 468 aa31.07■■■□□ 2.56
LSM7-201ENST00000252622 KLRG1Q96E93 195 aa31.07■■■□□ 2.56
LSM7-201ENST00000252622 CHMP4BQ9H444 224 aaKnown RBP31.07■■■□□ 2.56
LSM7-201ENST00000252622 AKAP2Q9Y2D5 859 aa31.07■■■□□ 2.56
LSM7-201ENST00000252622 FRAT2O75474 233 aaPredicted RBP31.06■■■□□ 2.56
LSM7-201ENST00000252622 USP48Q86UV5 1035 aa31.06■■■□□ 2.56
LSM7-201ENST00000252622 TBC1D22AQ8WUA7 517 aa31.06■■■□□ 2.56
LSM7-201ENST00000252622 ZBED3Q96IU2 234 aaPredicted RBP31.06■■■□□ 2.56
LSM7-201ENST00000252622 TRPM7Q96QT4 1865 aa31.06■■■□□ 2.56
LSM7-201ENST00000252622 WNT10BO00744 389 aa31.05■■■□□ 2.56
LSM7-201ENST00000252622 ANGEL2Q5VTE6 544 aaKnown RBP31.05■■■□□ 2.56
LSM7-201ENST00000252622 ZBTB40Q9NUA8 1239 aa31.05■■■□□ 2.56
LSM7-201ENST00000252622 ZBTB22O15209 634 aa31.04■■■□□ 2.56
LSM7-201ENST00000252622 CHAF1AQ13111 956 aaPredicted RBP31.04■■■□□ 2.56
LSM7-201ENST00000252622 NBPF9Q3BBW0 867 aa31.04■■■□□ 2.56
LSM7-201ENST00000252622 C20orf194Q5TEA3 1177 aa31.04■■■□□ 2.56
LSM7-201ENST00000252622 SULF1Q8IWU6 871 aa31.04■■■□□ 2.56
LSM7-201ENST00000252622 MTMR14Q8NCE2 650 aa31.04■■■□□ 2.56
LSM7-201ENST00000252622 F8W031 263 aaPredicted RBP31.03■■■□□ 2.56
LSM7-201ENST00000252622 GNL3LQ9NVN8 582 aaKnown RBP31.03■■■□□ 2.56
LSM7-201ENST00000252622 NOP58Q9Y2X3 529 aaKnown RBP31.03■■■□□ 2.56
LSM7-201ENST00000252622 A0A1B0GUL7 405 aa31.02■■■□□ 2.56
LSM7-201ENST00000252622 ADM5C9JUS6 153 aa31.02■■■□□ 2.56
LSM7-201ENST00000252622 CST9Q5W186 159 aa31.02■■■□□ 2.56
LSM7-201ENST00000252622 SURF6O75683 361 aaKnown RBP31.01■■■□□ 2.55
LSM7-201ENST00000252622 CELF2O95319 508 aaKnown RBP31.01■■■□□ 2.55
LSM7-201ENST00000252622 ADORA1P30542 326 aa31.01■■■□□ 2.55
LSM7-201ENST00000252622 DLGAP5Q15398 846 aa31.01■■■□□ 2.55
LSM7-201ENST00000252622 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP31.01■■■□□ 2.55
LSM7-201ENST00000252622 COL1A1P02452 1464 aaPredicted RBP31.01■■■□□ 2.55
LSM7-201ENST00000252622 SEMA3EO15041 775 aa31■■■□□ 2.55
LSM7-201ENST00000252622 TIMM10P62072 90 aa31■■■□□ 2.55
LSM7-201ENST00000252622 TTF2Q9UNY4 1162 aaKnown RBP31■■■□□ 2.55
LSM7-201ENST00000252622 CNTNAP1P78357 1384 aa31■■■□□ 2.55
LSM7-201ENST00000252622 MYH13Q9UKX3 1938 aa30.99■■■□□ 2.55
LSM7-201ENST00000252622 PHKA1P46020 1223 aa30.99■■■□□ 2.55
LSM7-201ENST00000252622 OS9Q13438 667 aaPredicted RBP30.99■■■□□ 2.55
LSM7-201ENST00000252622 CFAP100Q494V2 611 aa30.99■■■□□ 2.55
LSM7-201ENST00000252622 CCDC102BQ68D86 513 aa30.99■■■□□ 2.55
LSM7-201ENST00000252622 RPAP2Q8IXW5 612 aaPredicted RBP30.99■■■□□ 2.55
LSM7-201ENST00000252622 SUGT1Q9Y2Z0 365 aa30.99■■■□□ 2.55
LSM7-201ENST00000252622 POLR2AP24928 1970 aaKnown RBP30.99■■■□□ 2.55
LSM7-201ENST00000252622 WDR66Q8TBY9 1149 aa30.98■■■□□ 2.55
LSM7-201ENST00000252622 XAGE2Q96GT9 111 aa30.98■■■□□ 2.55
LSM7-201ENST00000252622 GPR108Q9NPR9 543 aa30.98■■■□□ 2.55
LSM7-201ENST00000252622 SERPINA10Q9UK55 444 aa30.98■■■□□ 2.55
LSM7-201ENST00000252622 SPDYE2BA6NHP3 402 aa30.97■■■□□ 2.55
LSM7-201ENST00000252622 RASSF10A6NK89 507 aa30.97■■■□□ 2.55
LSM7-201ENST00000252622 SPDYE6P0CI01 402 aa30.97■■■□□ 2.55
LSM7-201ENST00000252622 DENND2AQ9ULE3 1009 aa30.97■■■□□ 2.55
LSM7-201ENST00000252622 ABT1Q9ULW3 272 aaKnown RBP30.97■■■□□ 2.55
LSM7-201ENST00000252622 DLK2Q6UY11 383 aa30.96■■■□□ 2.55
LSM7-201ENST00000252622 JMYQ8N9B5 988 aa30.96■■■□□ 2.55
LSM7-201ENST00000252622 ZNF408Q9H9D4 720 aa30.96■■■□□ 2.55
LSM7-201ENST00000252622 MKRN1Q9UHC7 482 aaKnown RBP30.96■■■□□ 2.55
LSM7-201ENST00000252622 TLL2Q9Y6L7 1015 aa30.96■■■□□ 2.55
LSM7-201ENST00000252622 HDLBPQ00341 1268 aaKnown RBP30.95■■■□□ 2.55
LSM7-201ENST00000252622 GRIK5Q16478 980 aa30.95■■■□□ 2.55
LSM7-201ENST00000252622 APOBEC3FQ8IUX4 373 aaKnown RBP30.95■■■□□ 2.55
LSM7-201ENST00000252622 CDCA5Q96FF9 252 aa30.95■■■□□ 2.55
LSM7-201ENST00000252622 NEUROD6Q96NK8 337 aa30.95■■■□□ 2.55
LSM7-201ENST00000252622 PDS5AQ29RF7 1337 aaKnown RBP30.95■■■□□ 2.54
LSM7-201ENST00000252622 RRP1P56182 461 aaKnown RBP30.94■■■□□ 2.54
LSM7-201ENST00000252622 PCDHAC2Q9Y5I4 1007 aa30.94■■■□□ 2.54
LSM7-201ENST00000252622 MAST3O60307 1309 aa30.94■■■□□ 2.54
LSM7-201ENST00000252622 SALL1Q9NSC2 1324 aa30.94■■■□□ 2.54
LSM7-201ENST00000252622 ECM29Q5VYK3 1845 aa30.94■■■□□ 2.54
LSM7-201ENST00000252622 MYO1BO43795 1136 aa30.93■■■□□ 2.54
LSM7-201ENST00000252622 HMMRO75330 724 aa30.93■■■□□ 2.54
LSM7-201ENST00000252622 RBM5P52756 815 aaKnown RBP eCLIP30.93■■■□□ 2.54
LSM7-201ENST00000252622 TNNI3KQ59H18 835 aa30.93■■■□□ 2.54
LSM7-201ENST00000252622 PRMT6Q96LA8 375 aaPredicted RBP30.93■■■□□ 2.54
LSM7-201ENST00000252622 FPGT-TNNI3KV9GXZ4 949 aa30.93■■■□□ 2.54
LSM7-201ENST00000252622 CRKP46108 304 aa30.92■■■□□ 2.54
LSM7-201ENST00000252622 DEFB115Q30KQ5 88 aa30.92■■■□□ 2.54
LSM7-201ENST00000252622 RASGRF1Q13972 1273 aa30.91■■■□□ 2.54
LSM7-201ENST00000252622 SAPCD2Q86UD0 394 aa30.91■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms