RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 HMGB1P09429 215 aaKnown RBP4.86□□□□□ -1.63
UBE4A-201ENST00000252108 NOM1Q5C9Z4 860 aaKnown RBP4.86□□□□□ -1.63
UBE4A-201ENST00000252108 CPLX2Q6PUV4 134 aaKnown RBP4.86□□□□□ -1.63
UBE4A-201ENST00000252108 NECTIN2Q92692 538 aa4.86□□□□□ -1.63
UBE4A-201ENST00000252108 UBN2Q6ZU65 1347 aa4.86□□□□□ -1.63
UBE4A-201ENST00000252108 HSP90B1P14625 803 aaKnown RBP4.86□□□□□ -1.63
UBE4A-201ENST00000252108 TTLL7Q6ZT98 887 aa4.86□□□□□ -1.63
UBE4A-201ENST00000252108 ANKRD13DQ6ZTN6 518 aa4.86□□□□□ -1.63
UBE4A-201ENST00000252108 CEP57L1Q8IYX8 460 aa4.86□□□□□ -1.63
UBE4A-201ENST00000252108 KBTBD3Q8NAB2 608 aa4.86□□□□□ -1.63
UBE4A-201ENST00000252108 ANO10Q9NW15 660 aa4.86□□□□□ -1.63
UBE4A-201ENST00000252108 SPG7Q9UQ90 795 aa4.86□□□□□ -1.63
UBE4A-201ENST00000252108 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.86□□□□□ -1.639e-6■■■□□ 18.7
UBE4A-201ENST00000252108 MAST3O60307 1309 aa4.86□□□□□ -1.63
UBE4A-201ENST00000252108 NAV1Q8NEY1 1877 aa4.86□□□□□ -1.63
UBE4A-201ENST00000252108 KIF13BQ9NQT8 1826 aa4.85□□□□□ -1.63
UBE4A-201ENST00000252108 GOLGA6L9A6NEM1 432 aa4.85□□□□□ -1.63
UBE4A-201ENST00000252108 FIBPO43427 364 aa4.85□□□□□ -1.63
UBE4A-201ENST00000252108 HCLS1P14317 486 aaPredicted RBP4.85□□□□□ -1.63
UBE4A-201ENST00000252108 LARP1BQ659C4 914 aaKnown RBP4.85□□□□□ -1.63
UBE4A-201ENST00000252108 NOL8Q76FK4 1167 aaKnown RBP4.85□□□□□ -1.63
UBE4A-201ENST00000252108 ZNF710Q8N1W2 664 aa4.85□□□□□ -1.63
UBE4A-201ENST00000252108 KIF18AQ8NI77 898 aa4.85□□□□□ -1.63
UBE4A-201ENST00000252108 SRRTQ9BXP5 876 aaKnown RBP4.85□□□□□ -1.63
UBE4A-201ENST00000252108 TAOK2Q9UL54 1235 aa4.85□□□□□ -1.63
UBE4A-201ENST00000252108 EP400Q96L91 3159 aa4.85□□□□□ -1.63
UBE4A-201ENST00000252108 DHX16O60231 1041 aaKnown RBP4.85□□□□□ -1.63
UBE4A-201ENST00000252108 PFKFB2O60825 505 aa4.85□□□□□ -1.63
UBE4A-201ENST00000252108 NEXNQ0ZGT2 675 aa4.85□□□□□ -1.63
UBE4A-201ENST00000252108 SF3A1Q15459 793 aaKnown RBP4.85□□□□□ -1.63
UBE4A-201ENST00000252108 BLOC1S2Q6QNY1 142 aa4.85□□□□□ -1.63
UBE4A-201ENST00000252108 MB21D2Q8IYB1 491 aaPredicted RBP4.85□□□□□ -1.63
UBE4A-201ENST00000252108 EDC3Q96F86 508 aaKnown RBP4.85□□□□□ -1.63
UBE4A-201ENST00000252108 NOL10Q9BSC4 688 aaKnown RBP4.85□□□□□ -1.63
UBE4A-201ENST00000252108 COL11A2P13942 1736 aaPredicted RBP4.85□□□□□ -1.63
UBE4A-201ENST00000252108 BAZ2AQ9UIF9 1905 aaKnown RBP4.85□□□□□ -1.63
UBE4A-201ENST00000252108 SOX12O15370 315 aa4.85□□□□□ -1.63
UBE4A-201ENST00000252108 WDHD1O75717 1129 aaPredicted RBP4.85□□□□□ -1.63
UBE4A-201ENST00000252108 TFCP2Q12800 502 aa4.85□□□□□ -1.63
UBE4A-201ENST00000252108 FILIP1Q7Z7B0 1213 aa4.85□□□□□ -1.63
UBE4A-201ENST00000252108 CCDC191Q8NCU4 936 aa4.85□□□□□ -1.63
UBE4A-201ENST00000252108 ZNF34Q8IZ26 560 aa4.85□□□□□ -1.63
UBE4A-201ENST00000252108 CCDC150Q8NCX0 1101 aa4.85□□□□□ -1.63
UBE4A-201ENST00000252108 NSUN7Q8NE18 718 aaKnown RBP4.85□□□□□ -1.63
UBE4A-201ENST00000252108 SPATA32Q96LK8 384 aa4.85□□□□□ -1.63
UBE4A-201ENST00000252108 FMNL2Q96PY5 1086 aa4.85□□□□□ -1.63
UBE4A-201ENST00000252108 MAP3K15Q6ZN16 1313 aa4.85□□□□□ -1.63
UBE4A-201ENST00000252108 C10orf71Q711Q0 1435 aa4.85□□□□□ -1.63
UBE4A-201ENST00000252108 ARID4AP29374 1257 aaPredicted RBP4.85□□□□□ -1.63
UBE4A-201ENST00000252108 CDC37L1Q7L3B6 337 aa4.85□□□□□ -1.63
UBE4A-201ENST00000252108 JMYQ8N9B5 988 aa4.85□□□□□ -1.63
UBE4A-201ENST00000252108 DBNDD2Q9BQY9 259 aa4.85□□□□□ -1.63
UBE4A-201ENST00000252108 FAM217BQ9NTX9 383 aaPredicted RBP4.85□□□□□ -1.63
UBE4A-201ENST00000252108 C9orf78Q9NZ63 289 aaPredicted RBP4.85□□□□□ -1.63
UBE4A-201ENST00000252108 ZNF804BA4D1E1 1349 aa4.85□□□□□ -1.63
UBE4A-201ENST00000252108 ARFGEF1Q9Y6D6 1849 aa4.84□□□□□ -1.63
UBE4A-201ENST00000252108 SPDYE4A6NLX3 237 aa4.84□□□□□ -1.63
UBE4A-201ENST00000252108 IQCB1Q15051 598 aa4.84□□□□□ -1.63
UBE4A-201ENST00000252108 PTPN14Q15678 1187 aa4.84□□□□□ -1.63
UBE4A-201ENST00000252108 PLA2G4DQ86XP0 818 aa4.84□□□□□ -1.63
UBE4A-201ENST00000252108 KRT222Q8N1A0 295 aa4.84□□□□□ -1.63
UBE4A-201ENST00000252108 MNS1Q8NEH6 495 aa4.84□□□□□ -1.63
UBE4A-201ENST00000252108 ERCC4Q92889 916 aaPredicted RBP4.84□□□□□ -1.63
UBE4A-201ENST00000252108 LTV1Q96GA3 475 aaPredicted RBP4.84□□□□□ -1.63
UBE4A-201ENST00000252108 BRWD3Q6RI45 1802 aa4.84□□□□□ -1.63
UBE4A-201ENST00000252108 PCCAP05165 728 aaPredicted RBP4.84□□□□□ -1.63
UBE4A-201ENST00000252108 FGRP09769 529 aa4.84□□□□□ -1.63
UBE4A-201ENST00000252108 CYP19A1P11511 503 aaPredicted RBP4.84□□□□□ -1.63
UBE4A-201ENST00000252108 SCARF1Q14162 830 aa4.84□□□□□ -1.63
UBE4A-201ENST00000252108 BMS1Q14692 1282 aaKnown RBP4.84□□□□□ -1.63
UBE4A-201ENST00000252108 STX1AQ16623 288 aa4.84□□□□□ -1.63
UBE4A-201ENST00000252108 AK7Q96M32 723 aa4.84□□□□□ -1.63
UBE4A-201ENST00000252108 BEGAINQ9BUH8 593 aa4.84□□□□□ -1.63
UBE4A-201ENST00000252108 CNPY2Q9Y2B0 182 aa4.84□□□□□ -1.63
UBE4A-201ENST00000252108 TEFQ10587 303 aa4.84□□□□□ -1.63
UBE4A-201ENST00000252108 PPP4R3BQ5MIZ7 849 aa4.84□□□□□ -1.63
UBE4A-201ENST00000252108 PROSER2Q86WR7 435 aaPredicted RBP4.84□□□□□ -1.63
UBE4A-201ENST00000252108 ZNF397Q8NF99 534 aaPredicted RBP4.84□□□□□ -1.63
UBE4A-201ENST00000252108 DDX11Q96FC9 970 aa4.84□□□□□ -1.63
UBE4A-201ENST00000252108 HELLSQ9NRZ9 838 aa4.84□□□□□ -1.63
UBE4A-201ENST00000252108 MYO1BO43795 1136 aa4.84□□□□□ -1.63
UBE4A-201ENST00000252108 SCRN1Q12765 414 aa4.84□□□□□ -1.63
UBE4A-201ENST00000252108 NTRK3Q16288 839 aa4.84□□□□□ -1.63
UBE4A-201ENST00000252108 CABLES1Q8TDN4 633 aa4.84□□□□□ -1.63
UBE4A-201ENST00000252108 SEC62Q99442 399 aaKnown RBP4.84□□□□□ -1.63
UBE4A-201ENST00000252108 DACH1Q9UI36 760 aa4.84□□□□□ -1.63
UBE4A-201ENST00000252108 MRVI1Q9Y6F6 885 aa4.84□□□□□ -1.63
UBE4A-201ENST00000252108 POTEB2H3BUK9 544 aa4.84□□□□□ -1.64
UBE4A-201ENST00000252108 MAP4K4O95819 1239 aaPredicted RBP4.84□□□□□ -1.64
UBE4A-201ENST00000252108 TNNT1P13805 278 aa4.84□□□□□ -1.64
UBE4A-201ENST00000252108 CDC25BP30305 580 aa4.84□□□□□ -1.64
UBE4A-201ENST00000252108 TNNT3P45378 269 aaPredicted RBP4.84□□□□□ -1.64
UBE4A-201ENST00000252108 PPM1FP49593 454 aaPredicted RBP4.84□□□□□ -1.64
UBE4A-201ENST00000252108 DMTNQ08495 405 aa4.84□□□□□ -1.64
UBE4A-201ENST00000252108 SLFNL1Q499Z3 407 aa4.84□□□□□ -1.64
UBE4A-201ENST00000252108 CWC27Q6UX04 472 aaKnown RBP4.84□□□□□ -1.64
UBE4A-201ENST00000252108 ZNF384Q8TF68 577 aa4.84□□□□□ -1.64
UBE4A-201ENST00000252108 PIGBQ92521 554 aa4.84□□□□□ -1.64
UBE4A-201ENST00000252108 ZNF335Q9H4Z2 1342 aaPredicted RBP4.84□□□□□ -1.64
UBE4A-201ENST00000252108 TNS1Q9HBL0 1735 aaKnown RBP4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms