RNA–Protein interactions for RNA: ENST00000248054.9

SIN3B-201, Transcript of SIN3 transcription regulator family member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIN3B, Length 5,037 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-201ENST00000248054 TNS3Q68CZ2 1445 aa18.16■□□□□ 0.5
SIN3B-201ENST00000248054 MAGEB6Q8N7X4 407 aa18.16■□□□□ 0.5
SIN3B-201ENST00000248054 ZBTB38Q8NAP3 1195 aaPredicted RBP18.16■□□□□ 0.5
SIN3B-201ENST00000248054 GSPT1P15170 499 aaKnown RBP18.15■□□□□ 0.5
SIN3B-201ENST00000248054 TMEM266Q2M3C6 531 aa18.15■□□□□ 0.5
SIN3B-201ENST00000248054 RBM17Q96I25 401 aaKnown RBP18.15■□□□□ 0.5
SIN3B-201ENST00000248054 ALG1Q9BT22 464 aa18.15■□□□□ 0.5
SIN3B-201ENST00000248054 RBSNQ9H1K0 784 aa18.15■□□□□ 0.5
SIN3B-201ENST00000248054 TFIP11Q9UBB9 837 aaKnown RBP18.15■□□□□ 0.5
SIN3B-201ENST00000248054 TMEM131LA2VDJ0 1609 aa18.15■□□□□ 0.5
SIN3B-201ENST00000248054 OVOS2A0A0J9YW53 1432 aa18.15■□□□□ 0.5
SIN3B-201ENST00000248054 OVOS2Q6IE36 1432 aa18.15■□□□□ 0.5
SIN3B-201ENST00000248054 CT47A1Q5JQC4 288 aaPredicted RBP18.15■□□□□ 0.5
SIN3B-201ENST00000248054 TRAF1Q13077 416 aa18.15■□□□□ 0.5
SIN3B-201ENST00000248054 BRINP3Q76B58 766 aa18.15■□□□□ 0.5
SIN3B-201ENST00000248054 CCDC148Q8NFR7 591 aa18.15■□□□□ 0.5
SIN3B-201ENST00000248054 MYO3AQ8NEV4 1616 aa18.15■□□□□ 0.5
SIN3B-201ENST00000248054 KLHDC4Q8TBB5 520 aa18.14■□□□□ 0.5
SIN3B-201ENST00000248054 MAP3K15Q6ZN16 1313 aa18.14■□□□□ 0.49
SIN3B-201ENST00000248054 UTP14CQ5TAP6 766 aaKnown RBP18.14■□□□□ 0.49
SIN3B-201ENST00000248054 CNBD1Q8NA66 436 aa18.14■□□□□ 0.49
SIN3B-201ENST00000248054 CNNM3Q8NE01 707 aa18.14■□□□□ 0.49
SIN3B-201ENST00000248054 TMEM87BQ96K49 555 aa18.14■□□□□ 0.49
SIN3B-201ENST00000248054 KAT6BQ8WYB5 2073 aa18.14■□□□□ 0.49
SIN3B-201ENST00000248054 ZNF76P36508 570 aa18.14■□□□□ 0.49
SIN3B-201ENST00000248054 EYA3Q99504 573 aa18.14■□□□□ 0.49
SIN3B-201ENST00000248054 DSCC1Q9BVC3 393 aa18.14■□□□□ 0.49
SIN3B-201ENST00000248054 HELBQ8NG08 1087 aaPredicted RBP18.14■□□□□ 0.49
SIN3B-201ENST00000248054 TSC1Q92574 1164 aa18.14■□□□□ 0.49
SIN3B-201ENST00000248054 TSPYL1Q9H0U9 437 aa18.14■□□□□ 0.49
SIN3B-201ENST00000248054 GDPD2Q9HCC8 539 aa18.14■□□□□ 0.49
SIN3B-201ENST00000248054 CTSWP56202 376 aa18.13■□□□□ 0.49
SIN3B-201ENST00000248054 CCDC96Q2M329 555 aa18.13■□□□□ 0.49
SIN3B-201ENST00000248054 BRAPQ7Z569 592 aa18.13■□□□□ 0.49
SIN3B-201ENST00000248054 PIBF1Q8WXW3 757 aa18.13■□□□□ 0.49
SIN3B-201ENST00000248054 CIAO1O76071 339 aa18.13■□□□□ 0.49
SIN3B-201ENST00000248054 TCEANC2Q96MN5 208 aa18.13■□□□□ 0.49
SIN3B-201ENST00000248054 EHMT1Q9H9B1 1298 aa18.13■□□□□ 0.49
SIN3B-201ENST00000248054 REREQ9P2R6 1566 aa18.13■□□□□ 0.49
SIN3B-201ENST00000248054 HEG1Q9ULI3 1381 aa18.13■□□□□ 0.49
SIN3B-201ENST00000248054 CCDC82Q8N4S0 544 aa18.13■□□□□ 0.49
SIN3B-201ENST00000248054 ZNF622Q969S3 477 aaKnown RBP eCLIP18.13■□□□□ 0.496e-7■■□□□ 13
SIN3B-201ENST00000248054 GBP3Q9H0R5 595 aa18.13■□□□□ 0.49
SIN3B-201ENST00000248054 MROH2AA6NES4 1674 aa18.13■□□□□ 0.49
SIN3B-201ENST00000248054 USP48Q86UV5 1035 aa18.13■□□□□ 0.49
SIN3B-201ENST00000248054 MYRIPQ8NFW9 859 aa18.13■□□□□ 0.49
SIN3B-201ENST00000248054 ATG3Q9NT62 314 aa18.13■□□□□ 0.49
SIN3B-201ENST00000248054 TSPY3P0CV98 308 aa18.12■□□□□ 0.49
SIN3B-201ENST00000248054 TSPY8P0CW00 308 aa18.12■□□□□ 0.49
SIN3B-201ENST00000248054 LRRC2Q9BYS8 371 aa18.12■□□□□ 0.49
SIN3B-201ENST00000248054 THRAP3Q9Y2W1 955 aaKnown RBP18.12■□□□□ 0.49
SIN3B-201ENST00000248054 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.12■□□□□ 0.49
SIN3B-201ENST00000248054 ZSCAN12O43309 604 aa18.12■□□□□ 0.49
SIN3B-201ENST00000248054 ERLIN2O94905 339 aa18.12■□□□□ 0.49
SIN3B-201ENST00000248054 IL6STP40189 918 aaPredicted RBP18.12■□□□□ 0.49
SIN3B-201ENST00000248054 FAM98CQ17RN3 349 aaKnown RBP18.12■□□□□ 0.49
SIN3B-201ENST00000248054 CUL5Q93034 780 aa18.12■□□□□ 0.49
SIN3B-201ENST00000248054 CABP5Q9NP86 173 aa18.12■□□□□ 0.49
SIN3B-201ENST00000248054 PARP3Q9Y6F1 533 aa18.12■□□□□ 0.49
SIN3B-201ENST00000248054 ZNF500O60304 480 aaPredicted RBP18.12■□□□□ 0.49
SIN3B-201ENST00000248054 USP21Q9UK80 565 aa18.12■□□□□ 0.49
SIN3B-201ENST00000248054 ADCY5O95622 1261 aa18.12■□□□□ 0.49
SIN3B-201ENST00000248054 LDHBP07195 334 aaKnown RBP18.12■□□□□ 0.49
SIN3B-201ENST00000248054 CCDC102BQ68D86 513 aa18.11■□□□□ 0.49
SIN3B-201ENST00000248054 H0YHG0 523 aa18.11■□□□□ 0.49
SIN3B-201ENST00000248054 HCLS1P14317 486 aaPredicted RBP18.11■□□□□ 0.49
SIN3B-201ENST00000248054 TTC12Q9H892 705 aaPredicted RBP18.11■□□□□ 0.49
SIN3B-201ENST00000248054 TNIP1Q15025 636 aa18.11■□□□□ 0.49
SIN3B-201ENST00000248054 ZNF594Q96JF6 807 aaPredicted RBP18.11■□□□□ 0.49
SIN3B-201ENST00000248054 ZC3H12CQ9C0D7 883 aaKnown RBP18.11■□□□□ 0.49
SIN3B-201ENST00000248054 CNPY2Q9Y2B0 182 aa18.11■□□□□ 0.49
SIN3B-201ENST00000248054 TICAM2Q86XR7 235 aa18.11■□□□□ 0.49
SIN3B-201ENST00000248054 IQSEC3Q9UPP2 1182 aaPredicted RBP18.11■□□□□ 0.49
SIN3B-201ENST00000248054 TTLL7Q6ZT98 887 aa18.1■□□□□ 0.49
SIN3B-201ENST00000248054 MROH1Q8NDA8 1641 aa18.1■□□□□ 0.49
SIN3B-201ENST00000248054 PTPDC1A2A3K4 754 aa18.1■□□□□ 0.49
SIN3B-201ENST00000248054 IRX3P78415 501 aaPredicted RBP18.1■□□□□ 0.49
SIN3B-201ENST00000248054 CCDC144CPQ8IYA2 1237 aa18.1■□□□□ 0.49
SIN3B-201ENST00000248054 MRPS27Q92552 414 aaKnown RBP18.1■□□□□ 0.49
SIN3B-201ENST00000248054 FAM227BQ96M60 508 aa18.1■□□□□ 0.49
SIN3B-201ENST00000248054 RBM28Q9NW13 759 aaKnown RBP18.1■□□□□ 0.49
SIN3B-201ENST00000248054 TFCP2L1Q9NZI6 479 aa18.1■□□□□ 0.49
SIN3B-201ENST00000248054 MBD4O95243 580 aa18.1■□□□□ 0.49
SIN3B-201ENST00000248054 HIBADHP31937 336 aaKnown RBP18.1■□□□□ 0.49
SIN3B-201ENST00000248054 ODF2Q5BJF6 829 aa18.1■□□□□ 0.49
SIN3B-201ENST00000248054 SFPQP23246 707 aaKnown RBP eCLIP18.1■□□□□ 0.49
SIN3B-201ENST00000248054 EAF2Q96CJ1 260 aaPredicted RBP18.1■□□□□ 0.49
SIN3B-201ENST00000248054 TCP11L1Q9NUJ3 509 aa18.1■□□□□ 0.49
SIN3B-201ENST00000248054 FGFR1OPO95684 399 aaKnown RBP18.09■□□□□ 0.49
SIN3B-201ENST00000248054 CALML3P27482 149 aa18.09■□□□□ 0.49
SIN3B-201ENST00000248054 APOBRQ0VD83 1088 aa18.09■□□□□ 0.49
SIN3B-201ENST00000248054 CFAP100Q494V2 611 aa18.09■□□□□ 0.49
SIN3B-201ENST00000248054 GIGYF2Q6Y7W6 1299 aaKnown RBP18.09■□□□□ 0.49
SIN3B-201ENST00000248054 HAUS7Q99871 368 aa18.09■□□□□ 0.49
SIN3B-201ENST00000248054 AMPD3Q01432 767 aa18.09■□□□□ 0.49
SIN3B-201ENST00000248054 C1orf167Q5SNV9 1468 aa18.09■□□□□ 0.49
SIN3B-201ENST00000248054 SYT1P21579 422 aa18.09■□□□□ 0.49
SIN3B-201ENST00000248054 PROSER3Q2NL68 480 aa18.09■□□□□ 0.49
SIN3B-201ENST00000248054 PAXIP1Q6ZW49 1069 aaPredicted RBP18.09■□□□□ 0.49
SIN3B-201ENST00000248054 PPP2R5BQ15173 497 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms