RNA–Protein interactions for RNA: ENST00000244302.8

HIF3A-201, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 1 (best)

Gene HIF3A, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-201ENST00000244302 ZNF384Q8TF68 577 aa15.56■□□□□ 0.08
HIF3A-201ENST00000244302 LEMD3Q9Y2U8 911 aa15.56■□□□□ 0.08
HIF3A-201ENST00000244302 MAST3O60307 1309 aa15.56■□□□□ 0.08
HIF3A-201ENST00000244302 C21orf2O43822 256 aa15.55■□□□□ 0.08
HIF3A-201ENST00000244302 NFKBIBQ15653 356 aa15.55■□□□□ 0.08
HIF3A-201ENST00000244302 MCMDC2Q4G0Z9 681 aa15.55■□□□□ 0.08
HIF3A-201ENST00000244302 ADGRA1Q86SQ6 560 aa15.55■□□□□ 0.08
HIF3A-201ENST00000244302 MAGEB6Q8N7X4 407 aa15.55■□□□□ 0.08
HIF3A-201ENST00000244302 C7orf43Q8WVR3 580 aa15.55■□□□□ 0.08
HIF3A-201ENST00000244302 MTFR1LQ9H019 292 aa15.55■□□□□ 0.08
HIF3A-201ENST00000244302 KCNQ5Q9NR82 932 aa15.55■□□□□ 0.08
HIF3A-201ENST00000244302 MED23Q9ULK4 1368 aa15.55■□□□□ 0.08
HIF3A-201ENST00000244302 ZNF532Q9HCE3 1301 aa15.55■□□□□ 0.08
HIF3A-201ENST00000244302 FOXP2O15409 715 aa15.55■□□□□ 0.08
HIF3A-201ENST00000244302 PDE6AP16499 860 aa15.55■□□□□ 0.08
HIF3A-201ENST00000244302 DOK7Q18PE1 504 aa15.55■□□□□ 0.08
HIF3A-201ENST00000244302 MPNDQ8N594 471 aa15.55■□□□□ 0.08
HIF3A-201ENST00000244302 SGIP1Q9BQI5 828 aa15.55■□□□□ 0.08
HIF3A-201ENST00000244302 PODXL2Q9NZ53 605 aa15.55■□□□□ 0.08
HIF3A-201ENST00000244302 CACNA1SQ13698 1873 aa15.54■□□□□ 0.08
HIF3A-201ENST00000244302 ARAP2Q8WZ64 1704 aa15.54■□□□□ 0.08
HIF3A-201ENST00000244302 TCRBV5S4A2TA0A5A2 114 aa15.54■□□□□ 0.08
HIF3A-201ENST00000244302 CPA1P15085 419 aa15.54■□□□□ 0.08
HIF3A-201ENST00000244302 ATP2B4P23634 1241 aa15.54■□□□□ 0.08
HIF3A-201ENST00000244302 ADD2P35612 726 aa15.54■□□□□ 0.08
HIF3A-201ENST00000244302 STYK1Q6J9G0 422 aa15.54■□□□□ 0.08
HIF3A-201ENST00000244302 RUFY2Q8WXA3 655 aa15.54■□□□□ 0.08
HIF3A-201ENST00000244302 CCDC171Q6TFL3 1326 aa15.54■□□□□ 0.08
HIF3A-201ENST00000244302 RAD50Q92878 1312 aa15.54■□□□□ 0.08
HIF3A-201ENST00000244302 HIP1O00291 1037 aa15.53■□□□□ 0.08
HIF3A-201ENST00000244302 PRDX5P30044 214 aa15.53■□□□□ 0.08
HIF3A-201ENST00000244302 PTGER2P43116 358 aa15.53■□□□□ 0.08
HIF3A-201ENST00000244302 DPP8Q6V1X1 898 aaPredicted RBP15.53■□□□□ 0.08
HIF3A-201ENST00000244302 KIAA1211Q6ZU35 1233 aa15.53■□□□□ 0.08
HIF3A-201ENST00000244302 MXD3Q9BW11 206 aa15.53■□□□□ 0.08
HIF3A-201ENST00000244302 CD209Q9NNX6 404 aa15.53■□□□□ 0.08
HIF3A-201ENST00000244302 LRP2BPQ9P2M1 347 aa15.53■□□□□ 0.08
HIF3A-201ENST00000244302 C10orf71Q711Q0 1435 aa15.53■□□□□ 0.08
HIF3A-201ENST00000244302 MAP4K1Q92918 833 aa15.53■□□□□ 0.08
HIF3A-201ENST00000244302 GNL3LQ9NVN8 582 aaKnown RBP15.53■□□□□ 0.08
HIF3A-201ENST00000244302 RBM8AQ9Y5S9 174 aaKnown RBP15.53■□□□□ 0.08
HIF3A-201ENST00000244302 HSPA4P34932 840 aa15.52■□□□□ 0.08
HIF3A-201ENST00000244302 ADCK5Q3MIX3 580 aa15.52■□□□□ 0.08
HIF3A-201ENST00000244302 TTLL5Q6EMB2 1281 aa15.52■□□□□ 0.08
HIF3A-201ENST00000244302 MIGA1Q8NAN2 632 aa15.52■□□□□ 0.08
HIF3A-201ENST00000244302 TDRD7Q8NHU6 1098 aaKnown RBP15.52■□□□□ 0.08
HIF3A-201ENST00000244302 GSE1Q14687 1217 aa15.52■□□□□ 0.07
HIF3A-201ENST00000244302 SPRYD3Q8NCJ5 442 aa15.52■□□□□ 0.07
HIF3A-201ENST00000244302 TBC1D2Q9BYX2 928 aa15.52■□□□□ 0.07
HIF3A-201ENST00000244302 RAI14Q9P0K7 980 aa15.52■□□□□ 0.07
HIF3A-201ENST00000244302 DUOX1Q9NRD9 1551 aa15.51■□□□□ 0.07
HIF3A-201ENST00000244302 HSPD1P10809 573 aaKnown RBP15.51■□□□□ 0.07
HIF3A-201ENST00000244302 NECTIN1Q15223 517 aa15.51■□□□□ 0.07
HIF3A-201ENST00000244302 TTF1Q15361 905 aaPredicted RBP15.51■□□□□ 0.07
HIF3A-201ENST00000244302 CNKSR1Q969H4 720 aa15.51■□□□□ 0.07
HIF3A-201ENST00000244302 UPF3BQ9BZI7 483 aaKnown RBP15.51■□□□□ 0.07
HIF3A-201ENST00000244302 HELLSQ9NRZ9 838 aa15.51■□□□□ 0.07
HIF3A-201ENST00000244302 DENND2AQ9ULE3 1009 aa15.51■□□□□ 0.07
HIF3A-201ENST00000244302 SNX14Q9Y5W7 946 aa15.51■□□□□ 0.07
HIF3A-201ENST00000244302 PRKAB2O43741 272 aa15.5■□□□□ 0.07
HIF3A-201ENST00000244302 APPBP2Q92624 585 aa15.5■□□□□ 0.07
HIF3A-201ENST00000244302 DBNDD1Q9H9R9 158 aa15.5■□□□□ 0.07
HIF3A-201ENST00000244302 GPAA1O43292 621 aa15.5■□□□□ 0.07
HIF3A-201ENST00000244302 POLD1P28340 1107 aa15.5■□□□□ 0.07
HIF3A-201ENST00000244302 LARP6Q9BRS8 491 aaKnown RBP15.5■□□□□ 0.07
HIF3A-201ENST00000244302 ARMT1Q9H993 441 aa15.5■□□□□ 0.07
HIF3A-201ENST00000244302 MAP3K12Q12852 859 aa15.49■□□□□ 0.07
HIF3A-201ENST00000244302 CREB3L3Q68CJ9 461 aa15.49■□□□□ 0.07
HIF3A-201ENST00000244302 C15orf52Q6ZUT6 534 aaKnown RBP15.49■□□□□ 0.07
HIF3A-201ENST00000244302 TTLL6Q8N841 843 aa15.49■□□□□ 0.07
HIF3A-201ENST00000244302 NLGN2Q8NFZ4 835 aa15.49■□□□□ 0.07
HIF3A-201ENST00000244302 ZC3H12CQ9C0D7 883 aaKnown RBP15.49■□□□□ 0.07
HIF3A-201ENST00000244302 CHD4Q14839 1912 aa15.49■□□□□ 0.07
HIF3A-201ENST00000244302 LTBP1Q14766 1721 aa15.49■□□□□ 0.07
HIF3A-201ENST00000244302 SMIM22K7EJ46 135 aa15.49■□□□□ 0.07
HIF3A-201ENST00000244302 CYP7A1P22680 504 aa15.49■□□□□ 0.07
HIF3A-201ENST00000244302 DYNLL1P63167 89 aaKnown RBP15.49■□□□□ 0.07
HIF3A-201ENST00000244302 GTF2IP78347 998 aa15.49■□□□□ 0.07
HIF3A-201ENST00000244302 MECOMQ03112 1051 aa15.49■□□□□ 0.07
HIF3A-201ENST00000244302 BECN1Q14457 450 aa15.49■□□□□ 0.07
HIF3A-201ENST00000244302 UBE3CQ15386 1083 aa15.49■□□□□ 0.07
HIF3A-201ENST00000244302 ZNF804AQ7Z570 1209 aa15.49■□□□□ 0.07
HIF3A-201ENST00000244302 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.49■□□□□ 0.07
HIF3A-201ENST00000244302 SLC27A2O14975 620 aa15.48■□□□□ 0.07
HIF3A-201ENST00000244302 DIXDC1Q155Q3 683 aa15.48■□□□□ 0.07
HIF3A-201ENST00000244302 AOC3Q16853 763 aa15.48■□□□□ 0.07
HIF3A-201ENST00000244302 TMC4Q7Z404 712 aa15.48■□□□□ 0.07
HIF3A-201ENST00000244302 LCORLQ8N3X6 602 aa15.48■□□□□ 0.07
HIF3A-201ENST00000244302 FBXW7Q969H0 707 aa15.48■□□□□ 0.07
HIF3A-201ENST00000244302 NSUN4Q96CB9 384 aaKnown RBP15.48■□□□□ 0.07
HIF3A-201ENST00000244302 RFX7Q2KHR2 1363 aa15.48■□□□□ 0.07
HIF3A-201ENST00000244302 MBD4O95243 580 aa15.47■□□□□ 0.07
HIF3A-201ENST00000244302 ZFYP08048 801 aaPredicted RBP15.47■□□□□ 0.07
HIF3A-201ENST00000244302 IL1R1P14778 569 aa15.47■□□□□ 0.07
HIF3A-201ENST00000244302 NOL8Q76FK4 1167 aaKnown RBP15.47■□□□□ 0.07
HIF3A-201ENST00000244302 NKX2-3Q8TAU0 364 aa15.47■□□□□ 0.07
HIF3A-201ENST00000244302 TCEANC2Q96MN5 208 aa15.47■□□□□ 0.07
HIF3A-201ENST00000244302 LRRC37AA6NMS7 1700 aa15.47■□□□□ 0.07
HIF3A-201ENST00000244302 DTNBO60941 627 aa15.47■□□□□ 0.07
HIF3A-201ENST00000244302 CYP21A2P08686 494 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms