RNA–Protein interactions for RNA: ENST00000239374.7

CCDC170-201, Transcript of coiled-coil domain containing 170, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC170, Length 5,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170-201ENST00000239374 ODF2Q5BJF6 829 aa12.59□□□□□ -0.39
CCDC170-201ENST00000239374 SLC9C2Q5TAH2 1124 aa12.59□□□□□ -0.39
CCDC170-201ENST00000239374 LUC7LQ9NQ29 371 aaKnown RBP12.59□□□□□ -0.39
CCDC170-201ENST00000239374 PNPLA6Q8IY17 1366 aa12.59□□□□□ -0.39
CCDC170-201ENST00000239374 CPSF1Q10570 1443 aaKnown RBP12.59□□□□□ -0.39
CCDC170-201ENST00000239374 GPTP24298 496 aa12.59□□□□□ -0.39
CCDC170-201ENST00000239374 MFSD6Q6ZSS7 791 aa12.59□□□□□ -0.39
CCDC170-201ENST00000239374 NEK11Q8NG66 645 aa12.59□□□□□ -0.39
CCDC170-201ENST00000239374 TTC14Q96N46 770 aa12.59□□□□□ -0.39
CCDC170-201ENST00000239374 PCDHA7Q9UN72 937 aa12.59□□□□□ -0.39
CCDC170-201ENST00000239374 ZFYVE16Q7Z3T8 1539 aa12.59□□□□□ -0.39
CCDC170-201ENST00000239374 SPECC1Q5M775 1068 aa12.59□□□□□ -0.39
CCDC170-201ENST00000239374 NUTM2AQ8IVF1 878 aaPredicted RBP12.59□□□□□ -0.39
CCDC170-201ENST00000239374 GNL3LQ9NVN8 582 aaKnown RBP12.59□□□□□ -0.39
CCDC170-201ENST00000239374 ABCA6Q8N139 1617 aa12.58□□□□□ -0.39
CCDC170-201ENST00000239374 MTX1Q13505 466 aa12.58□□□□□ -0.4
CCDC170-201ENST00000239374 RRAGBQ5VZM2 374 aa12.58□□□□□ -0.4
CCDC170-201ENST00000239374 CTAGE1Q96RT6 745 aa12.58□□□□□ -0.4
CCDC170-201ENST00000239374 TLR7Q9NYK1 1049 aaKnown RBP12.58□□□□□ -0.4
CCDC170-201ENST00000239374 KCNH3Q9ULD8 1083 aa12.58□□□□□ -0.4
CCDC170-201ENST00000239374 TAF5LO75529 589 aa12.58□□□□□ -0.4
CCDC170-201ENST00000239374 IBSPP21815 317 aaPredicted RBP12.58□□□□□ -0.4
CCDC170-201ENST00000239374 SCRN1Q12765 414 aa12.58□□□□□ -0.4
CCDC170-201ENST00000239374 NECTIN1Q15223 517 aa12.58□□□□□ -0.4
CCDC170-201ENST00000239374 SYCP1Q15431 976 aa12.58□□□□□ -0.4
CCDC170-201ENST00000239374 ZNF589Q86UQ0 364 aaPredicted RBP12.58□□□□□ -0.4
CCDC170-201ENST00000239374 ANKLE2Q86XL3 938 aa12.58□□□□□ -0.4
CCDC170-201ENST00000239374 KCNF1Q9H3M0 494 aa12.58□□□□□ -0.4
CCDC170-201ENST00000239374 SPHKAPQ2M3C7 1700 aa12.58□□□□□ -0.4
CCDC170-201ENST00000239374 CDC42BPBQ9Y5S2 1711 aa12.58□□□□□ -0.4
CCDC170-201ENST00000239374 LRRC7Q96NW7 1537 aa12.58□□□□□ -0.4
CCDC170-201ENST00000239374 CFAP74Q9C0B2 1584 aa12.58□□□□□ -0.4
CCDC170-201ENST00000239374 WDHD1O75717 1129 aaPredicted RBP12.58□□□□□ -0.4
CCDC170-201ENST00000239374 CDC25BP30305 580 aa12.58□□□□□ -0.4
CCDC170-201ENST00000239374 CHMP4BP1P59074 171 aa12.58□□□□□ -0.4
CCDC170-201ENST00000239374 FBXO38Q6PIJ6 1188 aa12.58□□□□□ -0.4
CCDC170-201ENST00000239374 HDXQ7Z353 690 aa12.58□□□□□ -0.4
CCDC170-201ENST00000239374 KRI1Q8N9T8 703 aaKnown RBP12.58□□□□□ -0.4
CCDC170-201ENST00000239374 PLEKHG3A1L390 1219 aa12.58□□□□□ -0.4
CCDC170-201ENST00000239374 AKR1B15C9JRZ8 316 aaPredicted RBP12.58□□□□□ -0.4
CCDC170-201ENST00000239374 ATP5JP18859 108 aa12.58□□□□□ -0.4
CCDC170-201ENST00000239374 SMC1AQ14683 1233 aaKnown RBP12.58□□□□□ -0.4
CCDC170-201ENST00000239374 IP6K1Q92551 441 aa12.58□□□□□ -0.4
CCDC170-201ENST00000239374 GUCA1BQ9UMX6 200 aa12.58□□□□□ -0.4
CCDC170-201ENST00000239374 NDUFA8P51970 172 aa12.57□□□□□ -0.4
CCDC170-201ENST00000239374 MYSM1Q5VVJ2 828 aa12.57□□□□□ -0.4
CCDC170-201ENST00000239374 NFE2L3Q9Y4A8 694 aa12.57□□□□□ -0.4
CCDC170-201ENST00000239374 E7EWF7 191 aa12.57□□□□□ -0.4
CCDC170-201ENST00000239374 PFKFB2O60825 505 aa12.57□□□□□ -0.4
CCDC170-201ENST00000239374 PAFAH1B1P43034 410 aa12.57□□□□□ -0.4
CCDC170-201ENST00000239374 GTF2A1P52655 376 aaPredicted RBP12.57□□□□□ -0.4
CCDC170-201ENST00000239374 PIP4K2BP78356 416 aa12.57□□□□□ -0.4
CCDC170-201ENST00000239374 DHX37Q8IY37 1157 aaKnown RBP12.57□□□□□ -0.4
CCDC170-201ENST00000239374 GPATCH11Q8N954 259 aa12.57□□□□□ -0.4
CCDC170-201ENST00000239374 FAM107BQ9H098 131 aa12.57□□□□□ -0.4
CCDC170-201ENST00000239374 PRDM11Q9NQV5 511 aa12.57□□□□□ -0.4
CCDC170-201ENST00000239374 WTAPQ15007 396 aa12.57□□□□□ -0.4
CCDC170-201ENST00000239374 RTN1Q16799 776 aa12.57□□□□□ -0.4
CCDC170-201ENST00000239374 PPP1R13BQ96KQ4 1090 aa12.57□□□□□ -0.4
CCDC170-201ENST00000239374 USO1O60763 962 aaKnown RBP12.57□□□□□ -0.4
CCDC170-201ENST00000239374 NLRP5P59047 1200 aa12.57□□□□□ -0.4
CCDC170-201ENST00000239374 GCKRQ14397 625 aa12.57□□□□□ -0.4
CCDC170-201ENST00000239374 TTF1Q15361 905 aaPredicted RBP12.57□□□□□ -0.4
CCDC170-201ENST00000239374 CTCFLQ8NI51 663 aaPredicted RBP12.57□□□□□ -0.4
CCDC170-201ENST00000239374 DDX41Q9UJV9 622 aaKnown RBP12.57□□□□□ -0.4
CCDC170-201ENST00000239374 ATP7BP35670 1465 aa12.57□□□□□ -0.4
CCDC170-201ENST00000239374 CDK12Q9NYV4 1490 aaPredicted RBP12.57□□□□□ -0.4
CCDC170-201ENST00000239374 DPCR1Q3MIW9 517 aa12.56□□□□□ -0.4
CCDC170-201ENST00000239374 FKBP15Q5T1M5 1219 aa12.56□□□□□ -0.4
CCDC170-201ENST00000239374 NBPF6Q5VWK0 638 aa12.56□□□□□ -0.4
CCDC170-201ENST00000239374 NBPF4Q96M43 638 aa12.56□□□□□ -0.4
CCDC170-201ENST00000239374 RNF41Q9H4P4 317 aaPredicted RBP12.56□□□□□ -0.4
CCDC170-201ENST00000239374 ANKRD18BA2A2Z9 1011 aa12.56□□□□□ -0.4
CCDC170-201ENST00000239374 PFKFB1P16118 471 aa12.56□□□□□ -0.4
CCDC170-201ENST00000239374 CCDC144BQ3MJ40 725 aa12.56□□□□□ -0.4
CCDC170-201ENST00000239374 METTL22Q9BUU2 404 aaPredicted RBP12.56□□□□□ -0.4
CCDC170-201ENST00000239374 AK9Q5TCS8 1911 aa12.56□□□□□ -0.4
CCDC170-201ENST00000239374 MTIF2P46199 727 aaKnown RBP12.56□□□□□ -0.4
CCDC170-201ENST00000239374 ADKP55263 362 aaKnown RBP12.56□□□□□ -0.4
CCDC170-201ENST00000239374 PNOCQ13519 176 aa12.56□□□□□ -0.4
CCDC170-201ENST00000239374 IQCA1Q86XH1 822 aa12.56□□□□□ -0.4
CCDC170-201ENST00000239374 IGSF22Q8N9C0 903 aa12.56□□□□□ -0.4
CCDC170-201ENST00000239374 CAPZA3Q96KX2 299 aa12.56□□□□□ -0.4
CCDC170-201ENST00000239374 A0A1B0GUL7 405 aa12.56□□□□□ -0.4
CCDC170-201ENST00000239374 SSBP05455 408 aaKnown RBP eCLIP12.56□□□□□ -0.4
CCDC170-201ENST00000239374 ZSCAN26Q16670 478 aa12.56□□□□□ -0.4
CCDC170-201ENST00000239374 ZHX3Q9H4I2 956 aa12.56□□□□□ -0.4
CCDC170-201ENST00000239374 PSDA5PKW4 1024 aaPredicted RBP12.55□□□□□ -0.4
CCDC170-201ENST00000239374 CYP21A2P08686 494 aa12.55□□□□□ -0.4
CCDC170-201ENST00000239374 ZSCAN20P17040 1043 aaPredicted RBP12.55□□□□□ -0.4
CCDC170-201ENST00000239374 POLA2Q14181 598 aa12.55□□□□□ -0.4
CCDC170-201ENST00000239374 TRMT44Q8IYL2 757 aaKnown RBP12.55□□□□□ -0.4
CCDC170-201ENST00000239374 TRIM21P19474 475 aaKnown RBP12.55□□□□□ -0.4
CCDC170-201ENST00000239374 TERF2Q15554 542 aa12.55□□□□□ -0.4
CCDC170-201ENST00000239374 RNF187Q5TA31 235 aaPredicted RBP12.55□□□□□ -0.4
CCDC170-201ENST00000239374 NBPF11Q86T75 865 aa12.55□□□□□ -0.4
CCDC170-201ENST00000239374 DESI2Q9BSY9 194 aa12.55□□□□□ -0.4
CCDC170-201ENST00000239374 TRMT112Q9UI30 125 aaKnown RBP12.55□□□□□ -0.4
CCDC170-201ENST00000239374 EFCAB6Q5THR3 1501 aa12.55□□□□□ -0.4
CCDC170-201ENST00000239374 TRIM75PA6NK02 468 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 171.1 ms