RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 ZKSCAN5Q9Y2L8 839 aa19.03■□□□□ 0.64
UBE3D-201ENST00000237186 LRP5O75197 1615 aa19.03■□□□□ 0.64
UBE3D-201ENST00000237186 HCLS1P14317 486 aaPredicted RBP19.03■□□□□ 0.64
UBE3D-201ENST00000237186 LIG1P18858 919 aa19.03■□□□□ 0.64
UBE3D-201ENST00000237186 RBM43Q6ZSC3 357 aaKnown RBP19.03■□□□□ 0.64
UBE3D-201ENST00000237186 GOLGA6L4A6NEF3 574 aa19.02■□□□□ 0.64
UBE3D-201ENST00000237186 ZNF213O14771 459 aa19.02■□□□□ 0.64
UBE3D-201ENST00000237186 SUSD4Q5VX71 490 aa19.02■□□□□ 0.64
UBE3D-201ENST00000237186 BARGINQ6ZT62 677 aa19.02■□□□□ 0.64
UBE3D-201ENST00000237186 NCOA7Q8NI08 942 aa19.02■□□□□ 0.64
UBE3D-201ENST00000237186 C8orf37Q96NL8 207 aa19.02■□□□□ 0.64
UBE3D-201ENST00000237186 NUP62CLQ9H1M0 184 aa19.02■□□□□ 0.64
UBE3D-201ENST00000237186 LOC102724428A0A0B4J2F2 783 aa19.01■□□□□ 0.63
UBE3D-201ENST00000237186 CAMTA2O94983 1202 aa19.01■□□□□ 0.63
UBE3D-201ENST00000237186 CCDC192P0DO97 292 aa19.01■□□□□ 0.63
UBE3D-201ENST00000237186 ATP6V1AP38606 617 aa19.01■□□□□ 0.63
UBE3D-201ENST00000237186 CRKLP46109 303 aaKnown RBP19.01■□□□□ 0.63
UBE3D-201ENST00000237186 SIK1P57059 783 aa19.01■□□□□ 0.63
UBE3D-201ENST00000237186 CCT2P78371 535 aaKnown RBP19.01■□□□□ 0.63
UBE3D-201ENST00000237186 SLC9C2Q5TAH2 1124 aa19.01■□□□□ 0.63
UBE3D-201ENST00000237186 MARCH10Q8NA82 808 aaPredicted RBP19.01■□□□□ 0.63
UBE3D-201ENST00000237186 RGS22Q8NE09 1264 aa19.01■□□□□ 0.63
UBE3D-201ENST00000237186 PGBD1Q96JS3 809 aa19.01■□□□□ 0.63
UBE3D-201ENST00000237186 UTP14AQ9BVJ6 771 aaKnown RBP19.01■□□□□ 0.63
UBE3D-201ENST00000237186 PIH1D3Q9NQM4 214 aaKnown RBP19.01■□□□□ 0.63
UBE3D-201ENST00000237186 RCOR1Q9UKL0 485 aa19.01■□□□□ 0.63
UBE3D-201ENST00000237186 RTL9Q8NET4 1388 aa19.01■□□□□ 0.63
UBE3D-201ENST00000237186 KDM4AO75164 1064 aa19.01■□□□□ 0.63
UBE3D-201ENST00000237186 PHKA1P46020 1223 aa19.01■□□□□ 0.63
UBE3D-201ENST00000237186 MAP3K11Q16584 847 aa19.01■□□□□ 0.63
UBE3D-201ENST00000237186 NGLY1Q96IV0 654 aa19.01■□□□□ 0.63
UBE3D-201ENST00000237186 TCRBV5S4A2TA0A5A2 114 aa19■□□□□ 0.63
UBE3D-201ENST00000237186 PRC1O43663 620 aa19■□□□□ 0.63
UBE3D-201ENST00000237186 DHX16O60231 1041 aaKnown RBP19■□□□□ 0.63
UBE3D-201ENST00000237186 CHST3Q7LGC8 479 aa19■□□□□ 0.63
UBE3D-201ENST00000237186 CERKQ8TCT0 537 aa19■□□□□ 0.63
UBE3D-201ENST00000237186 DACT1Q9NYF0 836 aa19■□□□□ 0.63
UBE3D-201ENST00000237186 NUP98P52948 1817 aa18.99■□□□□ 0.63
UBE3D-201ENST00000237186 LAMA4Q16363 1823 aa18.99■□□□□ 0.63
UBE3D-201ENST00000237186 FDPSP14324 419 aaKnown RBP18.99■□□□□ 0.63
UBE3D-201ENST00000237186 ANTXR2P58335 489 aa18.99■□□□□ 0.63
UBE3D-201ENST00000237186 HAND2P61296 217 aa18.99■□□□□ 0.63
UBE3D-201ENST00000237186 TPRNQ4KMQ1 711 aa18.99■□□□□ 0.63
UBE3D-201ENST00000237186 NCOA5Q9HCD5 579 aaKnown RBP18.99■□□□□ 0.63
UBE3D-201ENST00000237186 PDE6AP16499 860 aa18.99■□□□□ 0.63
UBE3D-201ENST00000237186 ITPK1Q13572 414 aa18.99■□□□□ 0.63
UBE3D-201ENST00000237186 ALX1Q15699 326 aa18.99■□□□□ 0.63
UBE3D-201ENST00000237186 RALYLQ86SE5 291 aaKnown RBP18.99■□□□□ 0.63
UBE3D-201ENST00000237186 CLSTN2Q9H4D0 955 aa18.99■□□□□ 0.63
UBE3D-201ENST00000237186 AKAP11Q9UKA4 1901 aa18.98■□□□□ 0.63
UBE3D-201ENST00000237186 ZMYM6O95789 1325 aa18.98■□□□□ 0.63
UBE3D-201ENST00000237186 CARMIL3Q8ND23 1372 aa18.98■□□□□ 0.63
UBE3D-201ENST00000237186 SLC5A1P13866 664 aa18.98■□□□□ 0.63
UBE3D-201ENST00000237186 HPS5Q9UPZ3 1129 aa18.98■□□□□ 0.63
UBE3D-201ENST00000237186 DOT1LQ8TEK3 1739 aa18.98■□□□□ 0.63
UBE3D-201ENST00000237186 ZNF532Q9HCE3 1301 aa18.98■□□□□ 0.63
UBE3D-201ENST00000237186 KAT6BQ8WYB5 2073 aa18.97■□□□□ 0.63
UBE3D-201ENST00000237186 CICQ96RK0 1608 aaPredicted RBP18.97■□□□□ 0.63
UBE3D-201ENST00000237186 OFD1O75665 1012 aa18.97■□□□□ 0.63
UBE3D-201ENST00000237186 CCDC152Q4G0S7 254 aa18.97■□□□□ 0.63
UBE3D-201ENST00000237186 SMARCC1Q92922 1105 aaPredicted RBP18.97■□□□□ 0.63
UBE3D-201ENST00000237186 ZNF396Q96N95 335 aaPredicted RBP18.97■□□□□ 0.63
UBE3D-201ENST00000237186 NBPF3Q9H094 633 aa18.97■□□□□ 0.63
UBE3D-201ENST00000237186 USP25Q9UHP3 1055 aa18.97■□□□□ 0.63
UBE3D-201ENST00000237186 MYH3P11055 1940 aa18.97■□□□□ 0.63
UBE3D-201ENST00000237186 BCL9LQ86UU0 1499 aa18.97■□□□□ 0.63
UBE3D-201ENST00000237186 RREB1Q92766 1687 aa18.97■□□□□ 0.63
UBE3D-201ENST00000237186 IDH1O75874 414 aaKnown RBP18.97■□□□□ 0.63
UBE3D-201ENST00000237186 ADCY5O95622 1261 aa18.97■□□□□ 0.63
UBE3D-201ENST00000237186 NTSR2O95665 410 aa18.97■□□□□ 0.63
UBE3D-201ENST00000237186 VPS72Q15906 364 aa18.97■□□□□ 0.63
UBE3D-201ENST00000237186 SPATA5Q8NB90 893 aa18.97■□□□□ 0.63
UBE3D-201ENST00000237186 FAM200AQ8TCP9 573 aa18.97■□□□□ 0.63
UBE3D-201ENST00000237186 STRBPQ96SI9 672 aaKnown RBP18.97■□□□□ 0.63
UBE3D-201ENST00000237186 TNMDQ9H2S6 317 aa18.97■□□□□ 0.63
UBE3D-201ENST00000237186 GPHNQ9NQX3 736 aaPredicted RBP18.97■□□□□ 0.63
UBE3D-201ENST00000237186 SPATA31A6Q5VVP1 1343 aa18.96■□□□□ 0.63
UBE3D-201ENST00000237186 TRDNQ13061 729 aa18.96■□□□□ 0.63
UBE3D-201ENST00000237186 ACSBG1Q96GR2 724 aa18.96■□□□□ 0.63
UBE3D-201ENST00000237186 MPHOSPH8Q99549 860 aa18.96■□□□□ 0.63
UBE3D-201ENST00000237186 KLF18A0A0U1RQI7 1052 aa18.95■□□□□ 0.62
UBE3D-201ENST00000237186 NR1I2O75469 434 aa18.95■□□□□ 0.62
UBE3D-201ENST00000237186 TYRO3Q06418 890 aa18.95■□□□□ 0.62
UBE3D-201ENST00000237186 FAM98CQ17RN3 349 aaKnown RBP18.95■□□□□ 0.62
UBE3D-201ENST00000237186 FNBP4Q8N3X1 1017 aaPredicted RBP18.95■□□□□ 0.62
UBE3D-201ENST00000237186 HELBQ8NG08 1087 aaPredicted RBP18.95■□□□□ 0.62
UBE3D-201ENST00000237186 WWC3Q9ULE0 1092 aa18.95■□□□□ 0.62
UBE3D-201ENST00000237186 A0A0G2JS52 829 aa18.94■□□□□ 0.62
UBE3D-201ENST00000237186 CLEC4GQ6UXB4 293 aa18.94■□□□□ 0.62
UBE3D-201ENST00000237186 ILDR1Q86SU0 546 aaPredicted RBP18.94■□□□□ 0.62
UBE3D-201ENST00000237186 SEC31BQ9NQW1 1179 aa18.94■□□□□ 0.62
UBE3D-201ENST00000237186 NAP1L2Q9ULW6 460 aaPredicted RBP18.94■□□□□ 0.62
UBE3D-201ENST00000237186 MRVI1Q9Y6F6 885 aa18.94■□□□□ 0.62
UBE3D-201ENST00000237186 PATL2C9JE40 543 aaKnown RBP18.94■□□□□ 0.62
UBE3D-201ENST00000237186 RGL2O15211 777 aa18.94■□□□□ 0.62
UBE3D-201ENST00000237186 MAP3K12Q12852 859 aa18.94■□□□□ 0.62
UBE3D-201ENST00000237186 RASGRF1Q13972 1273 aa18.94■□□□□ 0.62
UBE3D-201ENST00000237186 CAMK4Q16566 473 aa18.94■□□□□ 0.62
UBE3D-201ENST00000237186 BICD2Q8TD16 824 aa18.94■□□□□ 0.62
UBE3D-201ENST00000237186 USP28Q96RU2 1077 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms