RNA–Protein interactions for RNA: ENST00000235958.4

HMGCL-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 5

Gene HMGCL, Length 1,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-201ENST00000235958 SNRKQ9NRH2 765 aa12.43□□□□□ -0.42
HMGCL-201ENST00000235958 HMG20BQ9P0W2 317 aa12.43□□□□□ -0.42
HMGCL-201ENST00000235958 DENND2AQ9ULE3 1009 aa12.43□□□□□ -0.42
HMGCL-201ENST00000235958 SCN9AQ15858 1988 aa12.42□□□□□ -0.42
HMGCL-201ENST00000235958 SEMA3EO15041 775 aa12.42□□□□□ -0.42
HMGCL-201ENST00000235958 ZBTB22O15209 634 aa12.42□□□□□ -0.42
HMGCL-201ENST00000235958 CHAF1AQ13111 956 aaPredicted RBP12.42□□□□□ -0.42
HMGCL-201ENST00000235958 RASGRF1Q13972 1273 aa12.42□□□□□ -0.42
HMGCL-201ENST00000235958 TNIP1Q15025 636 aa12.42□□□□□ -0.42
HMGCL-201ENST00000235958 STRIP1Q5VSL9 837 aa12.42□□□□□ -0.42
HMGCL-201ENST00000235958 TSHZ3Q63HK5 1081 aa12.42□□□□□ -0.42
HMGCL-201ENST00000235958 PI16Q6UXB8 463 aa12.42□□□□□ -0.42
HMGCL-201ENST00000235958 SKAP1Q86WV1 359 aa12.42□□□□□ -0.42
HMGCL-201ENST00000235958 SPATA5Q8NB90 893 aa12.42□□□□□ -0.42
HMGCL-201ENST00000235958 GPATCH3Q96I76 525 aa12.42□□□□□ -0.42
HMGCL-201ENST00000235958 BOLA2Q9H3K6 86 aa12.42□□□□□ -0.42
HMGCL-201ENST00000235958 JAG2Q9Y219 1238 aa12.42□□□□□ -0.42
HMGCL-201ENST00000235958 TTC41PQ6P2S7 1318 aa12.41□□□□□ -0.42
HMGCL-201ENST00000235958 FAM205AQ6ZU69 1335 aa12.41□□□□□ -0.42
HMGCL-201ENST00000235958 PSMD14O00487 310 aa12.41□□□□□ -0.42
HMGCL-201ENST00000235958 VIL1P09327 827 aaKnown RBP12.41□□□□□ -0.42
HMGCL-201ENST00000235958 DACT2Q5SW24 774 aa12.41□□□□□ -0.42
HMGCL-201ENST00000235958 CIAPIN1Q6FI81 312 aa12.41□□□□□ -0.42
HMGCL-201ENST00000235958 WDR66Q8TBY9 1149 aa12.41□□□□□ -0.42
HMGCL-201ENST00000235958 FBXW7Q969H0 707 aa12.41□□□□□ -0.42
HMGCL-201ENST00000235958 MXD3Q9BW11 206 aa12.41□□□□□ -0.42
HMGCL-201ENST00000235958 OSBPL3Q9H4L5 887 aa12.41□□□□□ -0.42
HMGCL-201ENST00000235958 NDUFB9Q9Y6M9 179 aa12.41□□□□□ -0.42
HMGCL-201ENST00000235958 AKAP11Q9UKA4 1901 aa12.41□□□□□ -0.42
HMGCL-201ENST00000235958 ERC2O15083 957 aa12.4□□□□□ -0.42
HMGCL-201ENST00000235958 GLRX3O76003 335 aaKnown RBP12.4□□□□□ -0.42
HMGCL-201ENST00000235958 CYP2E1P05181 493 aaPredicted RBP12.4□□□□□ -0.42
HMGCL-201ENST00000235958 ZAP70P43403 619 aa12.4□□□□□ -0.42
HMGCL-201ENST00000235958 DPY19L2Q6NUT2 758 aa12.4□□□□□ -0.42
HMGCL-201ENST00000235958 TBC1D9Q6ZT07 1266 aa12.4□□□□□ -0.42
HMGCL-201ENST00000235958 PI4K2BQ8TCG2 481 aa12.4□□□□□ -0.42
HMGCL-201ENST00000235958 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.4□□□□□ -0.42
HMGCL-201ENST00000235958 HAUS7Q99871 368 aa12.4□□□□□ -0.42
HMGCL-201ENST00000235958 ZBTB12Q9Y330 459 aaPredicted RBP12.4□□□□□ -0.42
HMGCL-201ENST00000235958 GJA3Q9Y6H8 435 aa12.4□□□□□ -0.42
HMGCL-201ENST00000235958 ARAP2Q8WZ64 1704 aa12.4□□□□□ -0.43
HMGCL-201ENST00000235958 DDNO94850 711 aaPredicted RBP12.39□□□□□ -0.43
HMGCL-201ENST00000235958 MFSD14BQ5SR56 506 aa12.39□□□□□ -0.43
HMGCL-201ENST00000235958 RSBN1LQ6PCB5 846 aaPredicted RBP12.39□□□□□ -0.43
HMGCL-201ENST00000235958 CERS5Q8N5B7 392 aa12.39□□□□□ -0.43
HMGCL-201ENST00000235958 TBC1D22AQ8WUA7 517 aa12.39□□□□□ -0.43
HMGCL-201ENST00000235958 GMLQ99445 158 aa12.39□□□□□ -0.43
HMGCL-201ENST00000235958 ANTXR1Q9H6X2 564 aa12.39□□□□□ -0.43
HMGCL-201ENST00000235958 PDS5AQ29RF7 1337 aaKnown RBP12.38□□□□□ -0.43
HMGCL-201ENST00000235958 ZNF541Q9H0D2 1346 aa12.38□□□□□ -0.43
HMGCL-201ENST00000235958 GLTPD2A6NH11 291 aa12.38□□□□□ -0.43
HMGCL-201ENST00000235958 RGS3P49796 1198 aa12.38□□□□□ -0.43
HMGCL-201ENST00000235958 FKBP1AP62942 108 aaKnown RBP12.38□□□□□ -0.43
HMGCL-201ENST00000235958 GRIK5Q16478 980 aa12.38□□□□□ -0.43
HMGCL-201ENST00000235958 GPC2Q8N158 579 aa12.38□□□□□ -0.43
HMGCL-201ENST00000235958 EDC3Q96F86 508 aaKnown RBP12.38□□□□□ -0.43
HMGCL-201ENST00000235958 DNAJC2Q99543 621 aaKnown RBP12.38□□□□□ -0.43
HMGCL-201ENST00000235958 ABCF2Q9UG63 623 aa12.38□□□□□ -0.43
HMGCL-201ENST00000235958 AOX1Q06278 1338 aa12.37□□□□□ -0.43
HMGCL-201ENST00000235958 ZC3H4Q9UPT8 1303 aaKnown RBP12.37□□□□□ -0.43
HMGCL-201ENST00000235958 MYH13Q9UKX3 1938 aa12.37□□□□□ -0.43
HMGCL-201ENST00000235958 GOLIM4O00461 696 aa12.37□□□□□ -0.43
HMGCL-201ENST00000235958 MAP4K4O95819 1239 aaPredicted RBP12.37□□□□□ -0.43
HMGCL-201ENST00000235958 GMPSP49915 693 aaPredicted RBP12.37□□□□□ -0.43
HMGCL-201ENST00000235958 SPTY2D1Q68D10 685 aaPredicted RBP12.37□□□□□ -0.43
HMGCL-201ENST00000235958 AGBL3Q8NEM8 1001 aa12.37□□□□□ -0.43
HMGCL-201ENST00000235958 DPF2Q92785 391 aa12.37□□□□□ -0.43
HMGCL-201ENST00000235958 PIH1D3Q9NQM4 214 aaKnown RBP12.37□□□□□ -0.43
HMGCL-201ENST00000235958 PAG1Q9NWQ8 432 aa12.37□□□□□ -0.43
HMGCL-201ENST00000235958 LRP2BPQ9P2M1 347 aa12.37□□□□□ -0.43
HMGCL-201ENST00000235958 SALL1Q9NSC2 1324 aa12.37□□□□□ -0.43
HMGCL-201ENST00000235958 MYO5AQ9Y4I1 1855 aaKnown RBP12.36□□□□□ -0.43
HMGCL-201ENST00000235958 COL1A1P02452 1464 aaPredicted RBP12.36□□□□□ -0.43
HMGCL-201ENST00000235958 F8W031 263 aaPredicted RBP12.36□□□□□ -0.43
HMGCL-201ENST00000235958 LDHBP07195 334 aaKnown RBP12.36□□□□□ -0.43
HMGCL-201ENST00000235958 RPS12P25398 132 aaKnown RBP12.36□□□□□ -0.43
HMGCL-201ENST00000235958 TTF1Q15361 905 aaPredicted RBP12.36□□□□□ -0.43
HMGCL-201ENST00000235958 ERICH6Q7L0X2 663 aa12.36□□□□□ -0.43
HMGCL-201ENST00000235958 KIAA0825Q8IV33 1275 aa12.36□□□□□ -0.43
HMGCL-201ENST00000235958 ZGPATQ8N5A5 531 aaKnown RBP12.36□□□□□ -0.43
HMGCL-201ENST00000235958 CNOT7Q9UIV1 285 aaKnown RBP12.36□□□□□ -0.43
HMGCL-201ENST00000235958 SUGT1Q9Y2Z0 365 aa12.36□□□□□ -0.43
HMGCL-201ENST00000235958 TRIM6-TRIM34B2RNG4 842 aa12.35□□□□□ -0.43
HMGCL-201ENST00000235958 USP17L8P0C7I0 530 aa12.35□□□□□ -0.43
HMGCL-201ENST00000235958 PRDX5P30044 214 aa12.35□□□□□ -0.43
HMGCL-201ENST00000235958 RAI14Q9P0K7 980 aa12.35□□□□□ -0.43
HMGCL-201ENST00000235958 TTF2Q9UNY4 1162 aaKnown RBP12.35□□□□□ -0.43
HMGCL-201ENST00000235958 MYO3BQ8WXR4 1341 aa12.35□□□□□ -0.43
HMGCL-201ENST00000235958 PSME4Q14997 1843 aa12.34□□□□□ -0.43
HMGCL-201ENST00000235958 IDH1O75874 414 aaKnown RBP12.34□□□□□ -0.43
HMGCL-201ENST00000235958 SCNN1DP51172 638 aa12.34□□□□□ -0.43
HMGCL-201ENST00000235958 MECOMQ03112 1051 aa12.34□□□□□ -0.43
HMGCL-201ENST00000235958 TTC22Q5TAA0 569 aa12.34□□□□□ -0.43
HMGCL-201ENST00000235958 OGFOD1Q8N543 542 aa12.34□□□□□ -0.43
HMGCL-201ENST00000235958 RILPL2Q969X0 211 aa12.34□□□□□ -0.43
HMGCL-201ENST00000235958 EVI5LQ96CN4 794 aa12.34□□□□□ -0.43
HMGCL-201ENST00000235958 MRIQ9BWK5 157 aa12.34□□□□□ -0.43
HMGCL-201ENST00000235958 GPRC5DQ9NZD1 345 aa12.34□□□□□ -0.43
HMGCL-201ENST00000235958 SHTN1A0MZ66 631 aa12.33□□□□□ -0.44
HMGCL-201ENST00000235958 H7C1D1 291 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms