RNA–Protein interactions for RNA: ENST00000231484.3

PCDH12-201, Transcript of protocadherin 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDH12, Length 6,562 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH12-201ENST00000231484 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.18□□□□□ -0.3
PCDH12-201ENST00000231484 CCDC25Q86WR0 208 aa13.18□□□□□ -0.3
PCDH12-201ENST00000231484 LARSQ9P2J5 1176 aaKnown RBP13.18□□□□□ -0.3
PCDH12-201ENST00000231484 TIAM1Q13009 1591 aa13.18□□□□□ -0.3
PCDH12-201ENST00000231484 IGSF22Q8N9C0 903 aa13.18□□□□□ -0.3
PCDH12-201ENST00000231484 THUMPD2Q9BTF0 503 aaKnown RBP13.18□□□□□ -0.3
PCDH12-201ENST00000231484 IGF1RP08069 1367 aa13.18□□□□□ -0.3
PCDH12-201ENST00000231484 IFIT1P09914 478 aaKnown RBP13.18□□□□□ -0.3
PCDH12-201ENST00000231484 RASSF2P50749 326 aa13.18□□□□□ -0.3
PCDH12-201ENST00000231484 PLCB1Q9NQ66 1216 aa13.18□□□□□ -0.3
PCDH12-201ENST00000231484 MTMR3Q13615 1198 aa13.17□□□□□ -0.3
PCDH12-201ENST00000231484 DIXDC1Q155Q3 683 aa13.17□□□□□ -0.3
PCDH12-201ENST00000231484 RASIP1Q5U651 963 aa13.17□□□□□ -0.3
PCDH12-201ENST00000231484 ZMAT2Q96NC0 199 aaKnown RBP13.17□□□□□ -0.3
PCDH12-201ENST00000231484 NAPBQ9H115 298 aa13.17□□□□□ -0.3
PCDH12-201ENST00000231484 MMRN2Q9H8L6 949 aa13.17□□□□□ -0.3
PCDH12-201ENST00000231484 PDE11AQ9HCR9 933 aa13.17□□□□□ -0.3
PCDH12-201ENST00000231484 CCDC62Q6P9F0 684 aa13.17□□□□□ -0.3
PCDH12-201ENST00000231484 CCDC63Q8NA47 563 aa13.17□□□□□ -0.3
PCDH12-201ENST00000231484 VCX3AQ9NNX9 186 aa13.17□□□□□ -0.3
PCDH12-201ENST00000231484 NUTM2BA6NNL0 878 aaPredicted RBP13.17□□□□□ -0.3
PCDH12-201ENST00000231484 NUTM2EB1AL46 878 aaPredicted RBP13.17□□□□□ -0.3
PCDH12-201ENST00000231484 ERCC3P19447 782 aa13.17□□□□□ -0.3
PCDH12-201ENST00000231484 CALCOCO2Q13137 446 aa13.17□□□□□ -0.3
PCDH12-201ENST00000231484 EXOC4Q96A65 974 aa13.17□□□□□ -0.3
PCDH12-201ENST00000231484 RPGRIP1Q96KN7 1286 aa13.17□□□□□ -0.3
PCDH12-201ENST00000231484 SLC26A6Q9BXS9 759 aa13.17□□□□□ -0.3
PCDH12-201ENST00000231484 DDX21Q9NR30 783 aaKnown RBP eCLIP13.17□□□□□ -0.3
PCDH12-201ENST00000231484 TXNDC9O14530 226 aa13.17□□□□□ -0.3
PCDH12-201ENST00000231484 GAS2L3Q86XJ1 694 aa13.17□□□□□ -0.3
PCDH12-201ENST00000231484 ARHGAP45Q92619 1136 aa13.17□□□□□ -0.3
PCDH12-201ENST00000231484 CABP1Q9NZU7 370 aa13.17□□□□□ -0.3
PCDH12-201ENST00000231484 RBM8AQ9Y5S9 174 aaKnown RBP13.17□□□□□ -0.3
PCDH12-201ENST00000231484 MYO1CO00159 1063 aa13.17□□□□□ -0.3
PCDH12-201ENST00000231484 STAT6P42226 847 aa13.17□□□□□ -0.3
PCDH12-201ENST00000231484 PSMC4P43686 418 aa13.17□□□□□ -0.3
PCDH12-201ENST00000231484 PHLDB3Q6NSJ2 640 aa13.17□□□□□ -0.3
PCDH12-201ENST00000231484 RASEFQ8IZ41 740 aa13.17□□□□□ -0.3
PCDH12-201ENST00000231484 GAPVD1Q14C86 1478 aa13.17□□□□□ -0.3
PCDH12-201ENST00000231484 JAKMIP2Q96AA8 810 aa13.17□□□□□ -0.3
PCDH12-201ENST00000231484 ALG1Q9BT22 464 aa13.17□□□□□ -0.3
PCDH12-201ENST00000231484 FAF1Q9UNN5 650 aaPredicted RBP13.17□□□□□ -0.3
PCDH12-201ENST00000231484 IL16Q14005 1332 aa13.16□□□□□ -0.3
PCDH12-201ENST00000231484 FGD5Q6ZNL6 1462 aa13.16□□□□□ -0.3
PCDH12-201ENST00000231484 COG7P83436 770 aa13.16□□□□□ -0.3
PCDH12-201ENST00000231484 CCDC141Q6ZP82 1450 aa13.16□□□□□ -0.3
PCDH12-201ENST00000231484 EHBP1L1Q8N3D4 1523 aa13.16□□□□□ -0.3
PCDH12-201ENST00000231484 GADD45BO75293 160 aaPredicted RBP13.16□□□□□ -0.3
PCDH12-201ENST00000231484 USP5P45974 858 aa13.16□□□□□ -0.3
PCDH12-201ENST00000231484 BICDL1Q6ZP65 573 aa13.16□□□□□ -0.3
PCDH12-201ENST00000231484 Q6ZUG5 572 aa13.16□□□□□ -0.3
PCDH12-201ENST00000231484 NCOA7Q8NI08 942 aa13.16□□□□□ -0.3
PCDH12-201ENST00000231484 FAM204AQ9H8W3 233 aa13.16□□□□□ -0.3
PCDH12-201ENST00000231484 UTP11Q9Y3A2 253 aaKnown RBP13.16□□□□□ -0.3
PCDH12-201ENST00000231484 F6X3S4 739 aa13.16□□□□□ -0.3
PCDH12-201ENST00000231484 STX17P56962 302 aa13.16□□□□□ -0.3
PCDH12-201ENST00000231484 IRX5P78411 483 aaPredicted RBP13.16□□□□□ -0.3
PCDH12-201ENST00000231484 BIRC2Q13490 618 aa13.16□□□□□ -0.3
PCDH12-201ENST00000231484 GSTA5Q7RTV2 222 aa13.16□□□□□ -0.3
PCDH12-201ENST00000231484 CCDC144CPQ8IYA2 1237 aa13.15□□□□□ -0.3
PCDH12-201ENST00000231484 OPHN1O60890 802 aa13.15□□□□□ -0.3
PCDH12-201ENST00000231484 VPS52Q8N1B4 723 aa13.15□□□□□ -0.3
PCDH12-201ENST00000231484 TATP17735 454 aaPredicted RBP13.15□□□□□ -0.3
PCDH12-201ENST00000231484 TMEM67Q5HYA8 995 aa13.15□□□□□ -0.3
PCDH12-201ENST00000231484 DHX58Q96C10 678 aa13.15□□□□□ -0.3
PCDH12-201ENST00000231484 RNF41Q9H4P4 317 aaPredicted RBP13.15□□□□□ -0.3
PCDH12-201ENST00000231484 LOC102724159A0A0B4J2E5 919 aa13.15□□□□□ -0.3
PCDH12-201ENST00000231484 PWP2Q15269 919 aaKnown RBP13.15□□□□□ -0.3
PCDH12-201ENST00000231484 BICDL2A1A5D9 508 aa13.15□□□□□ -0.31
PCDH12-201ENST00000231484 CLTAP09496 248 aa13.15□□□□□ -0.31
PCDH12-201ENST00000231484 KLF18A0A0U1RQI7 1052 aa13.14□□□□□ -0.31
PCDH12-201ENST00000231484 CATIPQ7Z7H3 387 aa13.14□□□□□ -0.31
PCDH12-201ENST00000231484 PYCARDQ9ULZ3 195 aa13.14□□□□□ -0.31
PCDH12-201ENST00000231484 E2F5Q15329 346 aa13.14□□□□□ -0.31
PCDH12-201ENST00000231484 MICU3Q86XE3 530 aa13.14□□□□□ -0.31
PCDH12-201ENST00000231484 SECISBP2LQ93073 1101 aaKnown RBP13.14□□□□□ -0.31
PCDH12-201ENST00000231484 LRP2BPQ9P2M1 347 aa13.14□□□□□ -0.31
PCDH12-201ENST00000231484 BTBD11A6QL63 1104 aa13.14□□□□□ -0.31
PCDH12-201ENST00000231484 HGSO14964 777 aaPredicted RBP13.14□□□□□ -0.31
PCDH12-201ENST00000231484 BRAPQ7Z569 592 aa13.14□□□□□ -0.31
PCDH12-201ENST00000231484 NCAPD3P42695 1498 aa13.14□□□□□ -0.31
PCDH12-201ENST00000231484 ACTN4O43707 911 aaKnown RBP13.14□□□□□ -0.31
PCDH12-201ENST00000231484 TMTC1Q8IUR5 882 aa13.14□□□□□ -0.31
PCDH12-201ENST00000231484 AFAP1Q8N556 730 aa13.14□□□□□ -0.31
PCDH12-201ENST00000231484 ZWINTO95229 277 aa13.14□□□□□ -0.31
PCDH12-201ENST00000231484 ZNF530Q6P9A1 599 aaPredicted RBP13.14□□□□□ -0.31
PCDH12-201ENST00000231484 TOM1L2Q6ZVM7 507 aa13.14□□□□□ -0.31
PCDH12-201ENST00000231484 LRRC8AQ8IWT6 810 aa13.14□□□□□ -0.31
PCDH12-201ENST00000231484 IQCA1Q86XH1 822 aa13.13□□□□□ -0.31
PCDH12-201ENST00000231484 SLC24A3Q9HC58 644 aa13.13□□□□□ -0.31
PCDH12-201ENST00000231484 MTUS1Q9ULD2 1270 aa13.13□□□□□ -0.31
PCDH12-201ENST00000231484 TCEANC2Q96MN5 208 aa13.13□□□□□ -0.31
PCDH12-201ENST00000231484 SEC31AO94979 1220 aaKnown RBP13.13□□□□□ -0.31
PCDH12-201ENST00000231484 ATP2A2P16615 1042 aaKnown RBP13.13□□□□□ -0.31
PCDH12-201ENST00000231484 TEX2Q8IWB9 1127 aa13.13□□□□□ -0.31
PCDH12-201ENST00000231484 ANKRD44Q8N8A2 993 aa13.13□□□□□ -0.31
PCDH12-201ENST00000231484 CFAP157Q5JU67 520 aa13.13□□□□□ -0.31
PCDH12-201ENST00000231484 CNPY4Q8N129 248 aa13.13□□□□□ -0.31
PCDH12-201ENST00000231484 NUF2Q9BZD4 464 aa13.13□□□□□ -0.31
PCDH12-201ENST00000231484 NAIPQ13075 1403 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms