RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 CHST3Q7LGC8 479 aa11.01□□□□□ -0.65
HLA-DOA-201ENST00000229829 CTNNA3Q9UI47 895 aa11.01□□□□□ -0.65
HLA-DOA-201ENST00000229829 PHKG2P15735 406 aa11.01□□□□□ -0.65
HLA-DOA-201ENST00000229829 TIMM10P62072 90 aa11.01□□□□□ -0.65
HLA-DOA-201ENST00000229829 CCT2P78371 535 aaKnown RBP11.01□□□□□ -0.65
HLA-DOA-201ENST00000229829 DDX19AQ9NUU7 478 aaKnown RBP11.01□□□□□ -0.65
HLA-DOA-201ENST00000229829 APOBRQ0VD83 1088 aa11□□□□□ -0.65
HLA-DOA-201ENST00000229829 SKIDA1Q1XH10 827 aa11□□□□□ -0.65
HLA-DOA-201ENST00000229829 MCMDC2Q4G0Z9 681 aa11□□□□□ -0.65
HLA-DOA-201ENST00000229829 LMBR1LQ6UX01 489 aa11□□□□□ -0.65
HLA-DOA-201ENST00000229829 GPATCH11Q8N954 259 aa11□□□□□ -0.65
HLA-DOA-201ENST00000229829 NEK11Q8NG66 645 aa11□□□□□ -0.65
HLA-DOA-201ENST00000229829 ERCC4Q92889 916 aaPredicted RBP11□□□□□ -0.65
HLA-DOA-201ENST00000229829 NEUROD6Q96NK8 337 aa11□□□□□ -0.65
HLA-DOA-201ENST00000229829 NCOA5Q9HCD5 579 aaKnown RBP11□□□□□ -0.65
HLA-DOA-201ENST00000229829 CTDNEP1O95476 244 aa11□□□□□ -0.65
HLA-DOA-201ENST00000229829 ADD1P35611 737 aaKnown RBP11□□□□□ -0.65
HLA-DOA-201ENST00000229829 ZNF75DP51815 510 aa11□□□□□ -0.65
HLA-DOA-201ENST00000229829 GUCY1B3Q02153 619 aa11□□□□□ -0.65
HLA-DOA-201ENST00000229829 ELF2Q15723 593 aa11□□□□□ -0.65
HLA-DOA-201ENST00000229829 CCDC144BQ3MJ40 725 aa11□□□□□ -0.65
HLA-DOA-201ENST00000229829 CCDC144CPQ8IYA2 1237 aa11□□□□□ -0.65
HLA-DOA-201ENST00000229829 NOL10Q9BSC4 688 aaKnown RBP11□□□□□ -0.65
HLA-DOA-201ENST00000229829 RSPH14Q9UHP6 348 aa11□□□□□ -0.65
HLA-DOA-201ENST00000229829 GOLIM4O00461 696 aa11□□□□□ -0.65
HLA-DOA-201ENST00000229829 KRT32Q14532 448 aa11□□□□□ -0.65
HLA-DOA-201ENST00000229829 PLA2G4DQ86XP0 818 aa11□□□□□ -0.65
HLA-DOA-201ENST00000229829 SECISBP2LQ93073 1101 aaKnown RBP11□□□□□ -0.65
HLA-DOA-201ENST00000229829 HAUS7Q99871 368 aa11□□□□□ -0.65
HLA-DOA-201ENST00000229829 ARID5BQ14865 1188 aa10.99□□□□□ -0.65
HLA-DOA-201ENST00000229829 CABLES1Q8TDN4 633 aa10.99□□□□□ -0.65
HLA-DOA-201ENST00000229829 LRRC37AA6NMS7 1700 aa10.99□□□□□ -0.65
HLA-DOA-201ENST00000229829 CAPN2P17655 700 aa10.99□□□□□ -0.65
HLA-DOA-201ENST00000229829 HNRNPH2P55795 449 aaKnown RBP10.99□□□□□ -0.65
HLA-DOA-201ENST00000229829 RABL6Q3YEC7 729 aaPredicted RBP10.99□□□□□ -0.65
HLA-DOA-201ENST00000229829 C11orf57Q6ZUT1 292 aaPredicted RBP10.99□□□□□ -0.65
HLA-DOA-201ENST00000229829 NSUN7Q8NE18 718 aaKnown RBP10.99□□□□□ -0.65
HLA-DOA-201ENST00000229829 U3KPZ7 1027 aaPredicted RBP10.99□□□□□ -0.65
HLA-DOA-201ENST00000229829 CYP27B1O15528 508 aa10.99□□□□□ -0.65
HLA-DOA-201ENST00000229829 ZSCAN25Q6NSZ9 544 aa10.99□□□□□ -0.65
HLA-DOA-201ENST00000229829 FILIP1Q7Z7B0 1213 aa10.99□□□□□ -0.65
HLA-DOA-201ENST00000229829 TDRD7Q8NHU6 1098 aaKnown RBP10.99□□□□□ -0.65
HLA-DOA-201ENST00000229829 CACTINQ8WUQ7 758 aaKnown RBP10.99□□□□□ -0.65
HLA-DOA-201ENST00000229829 GOLPH3LQ9H4A5 285 aa10.99□□□□□ -0.65
HLA-DOA-201ENST00000229829 TPM3P06753 285 aa10.98□□□□□ -0.65
HLA-DOA-201ENST00000229829 SNRPA1P09661 255 aaKnown RBP10.98□□□□□ -0.65
HLA-DOA-201ENST00000229829 CASP7P55210 303 aa10.98□□□□□ -0.65
HLA-DOA-201ENST00000229829 CHRNA2Q15822 529 aa10.98□□□□□ -0.65
HLA-DOA-201ENST00000229829 TTC5Q8N0Z6 440 aa10.98□□□□□ -0.65
HLA-DOA-201ENST00000229829 ANKRD7Q92527 254 aa10.98□□□□□ -0.65
HLA-DOA-201ENST00000229829 USP28Q96RU2 1077 aa10.98□□□□□ -0.65
HLA-DOA-201ENST00000229829 ZNF215Q9UL58 517 aaPredicted RBP10.98□□□□□ -0.65
HLA-DOA-201ENST00000229829 KBTBD3Q8NAB2 608 aa10.98□□□□□ -0.65
HLA-DOA-201ENST00000229829 SMARCC2Q8TAQ2 1214 aa10.98□□□□□ -0.65
HLA-DOA-201ENST00000229829 ZNF594Q96JF6 807 aaPredicted RBP10.98□□□□□ -0.65
HLA-DOA-201ENST00000229829 DDX41Q9UJV9 622 aaKnown RBP10.98□□□□□ -0.65
HLA-DOA-201ENST00000229829 MEGF6O75095 1541 aa10.98□□□□□ -0.65
HLA-DOA-201ENST00000229829 PTPDC1A2A3K4 754 aa10.97□□□□□ -0.65
HLA-DOA-201ENST00000229829 TATP17735 454 aaPredicted RBP10.97□□□□□ -0.65
HLA-DOA-201ENST00000229829 TTLL5Q6EMB2 1281 aa10.97□□□□□ -0.65
HLA-DOA-201ENST00000229829 CCAR1Q8IX12 1150 aaKnown RBP10.97□□□□□ -0.65
HLA-DOA-201ENST00000229829 KIF18AQ8NI77 898 aa10.97□□□□□ -0.65
HLA-DOA-201ENST00000229829 GPHNQ9NQX3 736 aaPredicted RBP10.97□□□□□ -0.65
HLA-DOA-201ENST00000229829 CLIP2Q9UDT6 1046 aa10.97□□□□□ -0.65
HLA-DOA-201ENST00000229829 PFKFB2O60825 505 aa10.97□□□□□ -0.65
HLA-DOA-201ENST00000229829 IQCB1Q15051 598 aa10.97□□□□□ -0.65
HLA-DOA-201ENST00000229829 DHX32Q7L7V1 743 aaKnown RBP10.97□□□□□ -0.65
HLA-DOA-201ENST00000229829 ATG9AQ7Z3C6 839 aa10.97□□□□□ -0.65
HLA-DOA-201ENST00000229829 ANKRD36CQ5JPF3 1778 aa10.97□□□□□ -0.65
HLA-DOA-201ENST00000229829 CSB-PGBD3P0DP91 1061 aa10.97□□□□□ -0.65
HLA-DOA-201ENST00000229829 FOXO4P98177 505 aa10.97□□□□□ -0.65
HLA-DOA-201ENST00000229829 LRRC24Q50LG9 513 aa10.97□□□□□ -0.65
HLA-DOA-201ENST00000229829 IFNL2Q8IZJ0 200 aa10.97□□□□□ -0.65
HLA-DOA-201ENST00000229829 LAMA4Q16363 1823 aa10.97□□□□□ -0.65
HLA-DOA-201ENST00000229829 AFDNP55196 1824 aaKnown RBP10.96□□□□□ -0.65
HLA-DOA-201ENST00000229829 SNW1Q13573 536 aaKnown RBP10.96□□□□□ -0.65
HLA-DOA-201ENST00000229829 TTLL7Q6ZT98 887 aa10.96□□□□□ -0.65
HLA-DOA-201ENST00000229829 ZSCAN16Q9H4T2 348 aaPredicted RBP10.96□□□□□ -0.65
HLA-DOA-201ENST00000229829 PAG1Q9NWQ8 432 aa10.96□□□□□ -0.65
HLA-DOA-201ENST00000229829 CFAP45Q9UL16 551 aa10.96□□□□□ -0.65
HLA-DOA-201ENST00000229829 NBPF26B4DH59 902 aa10.96□□□□□ -0.66
HLA-DOA-201ENST00000229829 NBPF14Q5TI25 921 aa10.96□□□□□ -0.66
HLA-DOA-201ENST00000229829 CEP135Q66GS9 1140 aa10.96□□□□□ -0.66
HLA-DOA-201ENST00000229829 OTUD7BQ6GQQ9 843 aa10.96□□□□□ -0.66
HLA-DOA-201ENST00000229829 NBPF10Q6P3W6 841 aaKnown RBP10.96□□□□□ -0.66
HLA-DOA-201ENST00000229829 NBPF15Q8N660 670 aa10.96□□□□□ -0.66
HLA-DOA-201ENST00000229829 TNS2Q63HR2 1409 aa10.96□□□□□ -0.66
HLA-DOA-201ENST00000229829 E7EWF7 191 aa10.96□□□□□ -0.66
HLA-DOA-201ENST00000229829 HSPD1P10809 573 aaKnown RBP10.96□□□□□ -0.66
HLA-DOA-201ENST00000229829 EXOSC10Q01780 885 aaKnown RBP10.96□□□□□ -0.66
HLA-DOA-201ENST00000229829 FMNL2Q96PY5 1086 aa10.96□□□□□ -0.66
HLA-DOA-201ENST00000229829 RCOR1Q9UKL0 485 aa10.96□□□□□ -0.66
HLA-DOA-201ENST00000229829 SMTNL1A8MU46 457 aa10.95□□□□□ -0.66
HLA-DOA-201ENST00000229829 KMT5BQ4FZB7 885 aa10.95□□□□□ -0.66
HLA-DOA-201ENST00000229829 USP27XA6NNY8 438 aa10.95□□□□□ -0.66
HLA-DOA-201ENST00000229829 GTF2A1P52655 376 aaPredicted RBP10.95□□□□□ -0.66
HLA-DOA-201ENST00000229829 RAB11FIP4Q86YS3 637 aa10.95□□□□□ -0.66
HLA-DOA-201ENST00000229829 PUS3Q9BZE2 481 aaKnown RBP10.95□□□□□ -0.66
HLA-DOA-201ENST00000229829 SLAIN2Q9P270 581 aa10.95□□□□□ -0.66
HLA-DOA-201ENST00000229829 SH3TC1Q8TE82 1336 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms