RNA–Protein interactions for RNA: ENST00000229214.8

KRR1-201, Transcript of KRR1, small subunit processome component homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRR1, Length 10,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRR1-201ENST00000229214 CUEDC2Q9H467 287 aa5.95□□□□□ -1.46
KRR1-201ENST00000229214 RNF14Q9UBS8 474 aa5.95□□□□□ -1.46
KRR1-201ENST00000229214 FBXO3Q9UK99 471 aa5.95□□□□□ -1.46
KRR1-201ENST00000229214 CCDC160A6NGH7 325 aa5.95□□□□□ -1.46
KRR1-201ENST00000229214 CASQ2O14958 399 aaPredicted RBP5.95□□□□□ -1.46
KRR1-201ENST00000229214 C4BPBP20851 252 aa5.95□□□□□ -1.46
KRR1-201ENST00000229214 PDE4AP27815 886 aa5.95□□□□□ -1.46
KRR1-201ENST00000229214 PDZD4Q76G19 769 aaPredicted RBP5.95□□□□□ -1.46
KRR1-201ENST00000229214 CCDC26Q8TAB7 109 aa5.95□□□□□ -1.46
KRR1-201ENST00000229214 TIGD1Q96MW7 591 aa5.95□□□□□ -1.46
KRR1-201ENST00000229214 ME1P48163 572 aa5.95□□□□□ -1.46
KRR1-201ENST00000229214 MYO1EQ12965 1108 aa5.95□□□□□ -1.46
KRR1-201ENST00000229214 CATIPQ7Z7H3 387 aa5.95□□□□□ -1.46
KRR1-201ENST00000229214 TEX11Q8IYF3 940 aa5.95□□□□□ -1.46
KRR1-201ENST00000229214 ABCA1O95477 2261 aa5.95□□□□□ -1.46
KRR1-201ENST00000229214 CFTRP13569 1480 aa5.95□□□□□ -1.46
KRR1-201ENST00000229214 DAPK3O43293 454 aa5.95□□□□□ -1.46
KRR1-201ENST00000229214 RPLP2P05387 115 aaKnown RBP5.95□□□□□ -1.46
KRR1-201ENST00000229214 SYNCQ9H7C4 482 aa5.95□□□□□ -1.46
KRR1-201ENST00000229214 SPTA1P02549 2419 aa5.95□□□□□ -1.46
KRR1-201ENST00000229214 MEIS1O00470 390 aa5.94□□□□□ -1.46
KRR1-201ENST00000229214 NBPF6Q5VWK0 638 aa5.94□□□□□ -1.46
KRR1-201ENST00000229214 BRAPQ7Z569 592 aa5.94□□□□□ -1.46
KRR1-201ENST00000229214 NBPF4Q96M43 638 aa5.94□□□□□ -1.46
KRR1-201ENST00000229214 TEX12Q9BXU0 123 aa5.94□□□□□ -1.46
KRR1-201ENST00000229214 HOXB7P09629 217 aa5.94□□□□□ -1.46
KRR1-201ENST00000229214 NFE2L2Q16236 605 aa5.94□□□□□ -1.46
KRR1-201ENST00000229214 STX1AQ16623 288 aa5.94□□□□□ -1.46
KRR1-201ENST00000229214 CYP26C1Q6V0L0 522 aa5.94□□□□□ -1.46
KRR1-201ENST00000229214 EIF4G3O43432 1585 aaKnown RBP5.94□□□□□ -1.46
KRR1-201ENST00000229214 SKILP12757 684 aa5.94□□□□□ -1.46
KRR1-201ENST00000229214 UBE2HP62256 183 aa5.94□□□□□ -1.46
KRR1-201ENST00000229214 TNNC1P63316 161 aa5.94□□□□□ -1.46
KRR1-201ENST00000229214 SLC4A8Q2Y0W8 1093 aa5.94□□□□□ -1.46
KRR1-201ENST00000229214 ZNF449Q6P9G9 518 aa5.94□□□□□ -1.46
KRR1-201ENST00000229214 JDP2Q8WYK2 163 aa5.94□□□□□ -1.46
KRR1-201ENST00000229214 EPC1Q9H2F5 836 aa5.94□□□□□ -1.46
KRR1-201ENST00000229214 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.94□□□□□ -1.46
KRR1-201ENST00000229214 LACTBP83111 547 aaPredicted RBP5.94□□□□□ -1.46
KRR1-201ENST00000229214 PPP2R5DQ14738 602 aa5.94□□□□□ -1.46
KRR1-201ENST00000229214 IMPACTQ9P2X3 320 aa5.94□□□□□ -1.46
KRR1-201ENST00000229214 NFU1Q9UMS0 254 aa5.94□□□□□ -1.46
KRR1-201ENST00000229214 REREQ9P2R6 1566 aa5.94□□□□□ -1.46
KRR1-201ENST00000229214 UQCRFS1P1P0C7P4 283 aa5.94□□□□□ -1.46
KRR1-201ENST00000229214 AKNAD1Q5T1N1 836 aa5.94□□□□□ -1.46
KRR1-201ENST00000229214 CCDC65Q8IXS2 484 aa5.94□□□□□ -1.46
KRR1-201ENST00000229214 EFCAB13Q8IY85 973 aa5.94□□□□□ -1.46
KRR1-201ENST00000229214 PPP1R14CQ8TAE6 165 aa5.94□□□□□ -1.46
KRR1-201ENST00000229214 RUBCNQ92622 972 aa5.94□□□□□ -1.46
KRR1-201ENST00000229214 CCDC68Q9H2F9 335 aa5.94□□□□□ -1.46
KRR1-201ENST00000229214 EXOC1Q9NV70 894 aa5.94□□□□□ -1.46
KRR1-201ENST00000229214 CDK13Q14004 1512 aaKnown RBP5.94□□□□□ -1.46
KRR1-201ENST00000229214 CEP250Q9BV73 2442 aa5.94□□□□□ -1.46
KRR1-201ENST00000229214 IKQ13123 557 aaPredicted RBP5.94□□□□□ -1.46
KRR1-201ENST00000229214 RIC3Q7Z5B4 369 aa5.94□□□□□ -1.46
KRR1-201ENST00000229214 LMNTD2Q8IXW0 634 aa5.94□□□□□ -1.46
KRR1-201ENST00000229214 RILPL2Q969X0 211 aa5.94□□□□□ -1.46
KRR1-201ENST00000229214 JPH4Q96JJ6 628 aa5.94□□□□□ -1.46
KRR1-201ENST00000229214 WIZO95785 1651 aa5.94□□□□□ -1.46
KRR1-201ENST00000229214 KIAA0586Q9BVV6 1533 aa5.94□□□□□ -1.46
KRR1-201ENST00000229214 MRC2Q9UBG0 1479 aa5.94□□□□□ -1.46
KRR1-201ENST00000229214 SF3A3Q12874 501 aaKnown RBP eCLIP5.94□□□□□ -1.46
KRR1-201ENST00000229214 RGS22Q8NE09 1264 aa5.94□□□□□ -1.46
KRR1-201ENST00000229214 CACTINQ8WUQ7 758 aaKnown RBP5.94□□□□□ -1.46
KRR1-201ENST00000229214 TRIM62Q9BVG3 475 aa5.94□□□□□ -1.46
KRR1-201ENST00000229214 TRPV6Q9H1D0 765 aa5.94□□□□□ -1.46
KRR1-201ENST00000229214 EPS15L1Q9UBC2 864 aa5.94□□□□□ -1.46
KRR1-201ENST00000229214 MID2Q9UJV3 735 aa5.94□□□□□ -1.46
KRR1-201ENST00000229214 P4HA1P13674 534 aa5.94□□□□□ -1.46
KRR1-201ENST00000229214 SEPT2Q15019 361 aa5.93□□□□□ -1.46
KRR1-201ENST00000229214 HAUS3Q68CZ6 603 aa5.93□□□□□ -1.46
KRR1-201ENST00000229214 IPO11Q9UI26 975 aaKnown RBP5.93□□□□□ -1.46
KRR1-201ENST00000229214 SNTNA6NMZ2 147 aa5.93□□□□□ -1.46
KRR1-201ENST00000229214 K7ELQ4 463 aaPredicted RBP5.93□□□□□ -1.46
KRR1-201ENST00000229214 AP3B1O00203 1094 aa5.93□□□□□ -1.46
KRR1-201ENST00000229214 HMOX1P09601 288 aa5.93□□□□□ -1.46
KRR1-201ENST00000229214 CALCOCO2Q13137 446 aa5.93□□□□□ -1.46
KRR1-201ENST00000229214 INF2Q27J81 1249 aa5.93□□□□□ -1.46
KRR1-201ENST00000229214 WDR7Q9Y4E6 1490 aa5.93□□□□□ -1.46
KRR1-201ENST00000229214 NPC1L1Q9UHC9 1359 aa5.93□□□□□ -1.46
KRR1-201ENST00000229214 KRT16P08779 473 aa5.93□□□□□ -1.46
KRR1-201ENST00000229214 PAWRQ96IZ0 340 aaKnown RBP5.93□□□□□ -1.46
KRR1-201ENST00000229214 PPCSQ9HAB8 311 aa5.93□□□□□ -1.46
KRR1-201ENST00000229214 TYW1Q9NV66 732 aaKnown RBP5.93□□□□□ -1.46
KRR1-201ENST00000229214 FYB2Q5VWT5 728 aa5.93□□□□□ -1.46
KRR1-201ENST00000229214 CCDC89Q8N998 374 aa5.93□□□□□ -1.46
KRR1-201ENST00000229214 ZC4H2Q9NQZ6 224 aa5.93□□□□□ -1.46
KRR1-201ENST00000229214 NDE1Q9NXR1 346 aa5.93□□□□□ -1.46
KRR1-201ENST00000229214 APOA4P06727 396 aa5.93□□□□□ -1.46
KRR1-201ENST00000229214 HSPA6P17066 643 aa5.93□□□□□ -1.46
KRR1-201ENST00000229214 CEBPZQ03701 1054 aaKnown RBP5.93□□□□□ -1.46
KRR1-201ENST00000229214 PSMD6Q15008 389 aa5.93□□□□□ -1.46
KRR1-201ENST00000229214 ODR4Q5SWX8 454 aa5.93□□□□□ -1.46
KRR1-201ENST00000229214 CCDC122Q5T0U0 273 aa5.93□□□□□ -1.46
KRR1-201ENST00000229214 GALNT17Q6IS24 598 aa5.93□□□□□ -1.46
KRR1-201ENST00000229214 EVI5LQ96CN4 794 aa5.93□□□□□ -1.46
KRR1-201ENST00000229214 CCDC97Q96F63 343 aaPredicted RBP5.93□□□□□ -1.46
KRR1-201ENST00000229214 NUF2Q9BZD4 464 aa5.93□□□□□ -1.46
KRR1-201ENST00000229214 GCC2Q8IWJ2 1684 aa5.93□□□□□ -1.46
KRR1-201ENST00000229214 NDUFAB1O14561 156 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms