RNA–Protein interactions for RNA: ENST00000225844.6

CCL13-201, Transcript of C-C motif chemokine ligand 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL13, Length 851 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13-201ENST00000225844 ANKRD44Q8N8A2 993 aa9.45□□□□□ -0.9
CCL13-201ENST00000225844 GRAPLQ8TC17 118 aaPredicted RBP9.45□□□□□ -0.9
CCL13-201ENST00000225844 SSH3Q8TE77 659 aa9.45□□□□□ -0.9
CCL13-201ENST00000225844 HHIPL1Q96JK4 782 aa9.45□□□□□ -0.9
CCL13-201ENST00000225844 VPS33BQ9H267 617 aa9.45□□□□□ -0.9
CCL13-201ENST00000225844 BICC1Q9H694 974 aaKnown RBP9.45□□□□□ -0.9
CCL13-201ENST00000225844 COPRSQ9NQ92 184 aa9.45□□□□□ -0.9
CCL13-201ENST00000225844 BSDC1Q9NW68 430 aaPredicted RBP9.45□□□□□ -0.9
CCL13-201ENST00000225844 TNNQ9UQP3 1299 aa9.45□□□□□ -0.9
CCL13-201ENST00000225844 LRRFIP2Q9Y608 721 aaKnown RBP9.45□□□□□ -0.9
CCL13-201ENST00000225844 LTBP1Q14766 1721 aa9.45□□□□□ -0.9
CCL13-201ENST00000225844 SRGAP3O43295 1099 aa9.44□□□□□ -0.9
CCL13-201ENST00000225844 CIAO1O76071 339 aa9.44□□□□□ -0.9
CCL13-201ENST00000225844 ITGA6P23229 1130 aa9.44□□□□□ -0.9
CCL13-201ENST00000225844 RTL5Q5HYW3 569 aaPredicted RBP9.44□□□□□ -0.9
CCL13-201ENST00000225844 SLC51AQ86UW1 340 aa9.44□□□□□ -0.9
CCL13-201ENST00000225844 SP8Q8IXZ3 490 aa9.44□□□□□ -0.9
CCL13-201ENST00000225844 CRBNQ96SW2 442 aa9.44□□□□□ -0.9
CCL13-201ENST00000225844 ZIC5Q96T25 663 aa9.44□□□□□ -0.9
CCL13-201ENST00000225844 MPHOSPH8Q99549 860 aa9.44□□□□□ -0.9
CCL13-201ENST00000225844 RWDD1Q9H446 243 aaPredicted RBP9.44□□□□□ -0.9
CCL13-201ENST00000225844 ABCC12Q96J65 1359 aa9.44□□□□□ -0.9
CCL13-201ENST00000225844 COL4A5P29400 1685 aa9.44□□□□□ -0.9
CCL13-201ENST00000225844 HDAC1Q13547 482 aaPredicted RBP9.43□□□□□ -0.9
CCL13-201ENST00000225844 TAF7LQ5H9L4 462 aa9.43□□□□□ -0.9
CCL13-201ENST00000225844 CEP85Q6P2H3 762 aa9.43□□□□□ -0.9
CCL13-201ENST00000225844 CDC37L1Q7L3B6 337 aa9.43□□□□□ -0.9
CCL13-201ENST00000225844 USP48Q86UV5 1035 aa9.43□□□□□ -0.9
CCL13-201ENST00000225844 ERC1Q8IUD2 1116 aa9.43□□□□□ -0.9
CCL13-201ENST00000225844 ANKRD2Q9GZV1 360 aa9.43□□□□□ -0.9
CCL13-201ENST00000225844 GREM2Q9H772 168 aa9.43□□□□□ -0.9
CCL13-201ENST00000225844 NOP58Q9Y2X3 529 aaKnown RBP9.43□□□□□ -0.9
CCL13-201ENST00000225844 ATP6V0A2Q9Y487 856 aa9.43□□□□□ -0.9
CCL13-201ENST00000225844 SNED1Q8TER0 1413 aa9.42□□□□□ -0.9
CCL13-201ENST00000225844 MROH5Q6ZUA9 1318 aa9.42□□□□□ -0.9
CCL13-201ENST00000225844 RAB11FIP3O75154 756 aa9.42□□□□□ -0.9
CCL13-201ENST00000225844 TRPA1O75762 1119 aa9.42□□□□□ -0.9
CCL13-201ENST00000225844 RAD17O75943 681 aa9.42□□□□□ -0.9
CCL13-201ENST00000225844 IL15P40933 162 aaPredicted RBP9.42□□□□□ -0.9
CCL13-201ENST00000225844 CXCL9Q07325 125 aa9.42□□□□□ -0.9
CCL13-201ENST00000225844 EPHA10Q5JZY3 1008 aa9.42□□□□□ -0.9
CCL13-201ENST00000225844 IER5LQ5T953 404 aa9.42□□□□□ -0.9
CCL13-201ENST00000225844 LDHAL6AQ6ZMR3 332 aa9.42□□□□□ -0.9
CCL13-201ENST00000225844 HS6ST3Q8IZP7 471 aa9.42□□□□□ -0.9
CCL13-201ENST00000225844 TRPM4Q8TD43 1214 aa9.42□□□□□ -0.9
CCL13-201ENST00000225844 JARID2Q92833 1246 aaPredicted RBP9.42□□□□□ -0.9
CCL13-201ENST00000225844 GCC1Q96CN9 775 aa9.42□□□□□ -0.9
CCL13-201ENST00000225844 PODXL2Q9NZ53 605 aa9.42□□□□□ -0.9
CCL13-201ENST00000225844 ZNRF3Q9ULT6 936 aa9.42□□□□□ -0.9
CCL13-201ENST00000225844 CHMP3Q9Y3E7 222 aa9.42□□□□□ -0.9
CCL13-201ENST00000225844 H7C1D1 291 aa9.41□□□□□ -0.9
CCL13-201ENST00000225844 EYA2O00167 538 aa9.41□□□□□ -0.9
CCL13-201ENST00000225844 RFX5P48382 616 aaPredicted RBP9.41□□□□□ -0.9
CCL13-201ENST00000225844 KIF23Q02241 960 aaPredicted RBP9.41□□□□□ -0.9
CCL13-201ENST00000225844 PTPN12Q05209 780 aaKnown RBP9.41□□□□□ -0.9
CCL13-201ENST00000225844 G3BP1Q13283 466 aaKnown RBP eCLIP9.41□□□□□ -0.9
CCL13-201ENST00000225844 TNIP1Q15025 636 aa9.41□□□□□ -0.9
CCL13-201ENST00000225844 PDCD7Q8N8D1 485 aaKnown RBP9.41□□□□□ -0.9
CCL13-201ENST00000225844 SUPT20HQ8NEM7 779 aa9.41□□□□□ -0.9
CCL13-201ENST00000225844 EXOC6Q8TAG9 804 aa9.41□□□□□ -0.9
CCL13-201ENST00000225844 ZC3H15Q8WU90 426 aaKnown RBP9.41□□□□□ -0.9
CCL13-201ENST00000225844 SAGE1Q9NXZ1 904 aa9.41□□□□□ -0.9
CCL13-201ENST00000225844 TAOK2Q9UL54 1235 aa9.41□□□□□ -0.9
CCL13-201ENST00000225844 AKAP2Q9Y2D5 859 aa9.41□□□□□ -0.9
CCL13-201ENST00000225844 LEMD3Q9Y2U8 911 aa9.41□□□□□ -0.9
CCL13-201ENST00000225844 RIPOR2Q9Y4F9 1068 aa9.41□□□□□ -0.9
CCL13-201ENST00000225844 LAMB2P55268 1798 aa9.41□□□□□ -0.9
CCL13-201ENST00000225844 ZNF157P51786 506 aaPredicted RBP9.4□□□□□ -0.9
CCL13-201ENST00000225844 HIRAP54198 1017 aaPredicted RBP9.4□□□□□ -0.9
CCL13-201ENST00000225844 MKRN3Q13064 507 aaKnown RBP9.4□□□□□ -0.9
CCL13-201ENST00000225844 RGMBQ6NW40 437 aa9.4□□□□□ -0.9
CCL13-201ENST00000225844 DLK2Q6UY11 383 aa9.4□□□□□ -0.9
CCL13-201ENST00000225844 DPP8Q6V1X1 898 aaPredicted RBP9.4□□□□□ -0.9
CCL13-201ENST00000225844 C3orf67Q6ZVT6 689 aa9.4□□□□□ -0.9
CCL13-201ENST00000225844 CTU1Q7Z7A3 348 aaKnown RBP9.4□□□□□ -0.9
CCL13-201ENST00000225844 C2orf69Q8N8R5 385 aa9.4□□□□□ -0.9
CCL13-201ENST00000225844 DCTPP1Q9H773 170 aa9.4□□□□□ -0.9
CCL13-201ENST00000225844 GBA2Q9HCG7 927 aaPredicted RBP9.4□□□□□ -0.9
CCL13-201ENST00000225844 GPR108Q9NPR9 543 aa9.4□□□□□ -0.9
CCL13-201ENST00000225844 SEC31BQ9NQW1 1179 aa9.4□□□□□ -0.9
CCL13-201ENST00000225844 CNNM1Q9NRU3 951 aa9.4□□□□□ -0.9
CCL13-201ENST00000225844 RNF186Q9NXI6 227 aa9.4□□□□□ -0.9
CCL13-201ENST00000225844 CEP126Q9P2H0 1117 aa9.4□□□□□ -0.9
CCL13-201ENST00000225844 PGAP2Q9UHJ9 254 aa9.4□□□□□ -0.9
CCL13-201ENST00000225844 CNOT7Q9UIV1 285 aaKnown RBP9.4□□□□□ -0.9
CCL13-201ENST00000225844 CASP8AP2Q9UKL3 1982 aa9.4□□□□□ -0.9
CCL13-201ENST00000225844 XDHP47989 1333 aa9.39□□□□□ -0.91
CCL13-201ENST00000225844 PNMA6EA0A0J9YXQ4 647 aa9.39□□□□□ -0.91
CCL13-201ENST00000225844 SHTN1A0MZ66 631 aa9.39□□□□□ -0.91
CCL13-201ENST00000225844 SURF6O75683 361 aaKnown RBP9.39□□□□□ -0.91
CCL13-201ENST00000225844 ATP2B4P23634 1241 aa9.39□□□□□ -0.91
CCL13-201ENST00000225844 UBE4AQ14139 1066 aa9.39□□□□□ -0.91
CCL13-201ENST00000225844 KRT26Q7Z3Y9 468 aa9.39□□□□□ -0.91
CCL13-201ENST00000225844 MICALL2Q8IY33 904 aa9.39□□□□□ -0.91
CCL13-201ENST00000225844 CELF1Q92879 486 aaKnown RBP9.39□□□□□ -0.91
CCL13-201ENST00000225844 CCDC102AQ96A19 550 aa9.39□□□□□ -0.91
CCL13-201ENST00000225844 EYA3Q99504 573 aa9.39□□□□□ -0.91
CCL13-201ENST00000225844 RTFDC1Q9BY42 306 aaPredicted RBP9.39□□□□□ -0.91
CCL13-201ENST00000225844 MINPP1Q9UNW1 487 aa9.39□□□□□ -0.91
CCL13-201ENST00000225844 PCDHB15Q9Y5E8 787 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms