RNA–Protein interactions for RNA: ENST00000225696.8

NUP88-201, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 2,194 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-201ENST00000225696 FOXO4P98177 505 aa14.45□□□□□ -0.1
NUP88-201ENST00000225696 NCAPHQ15003 741 aa14.45□□□□□ -0.1
NUP88-201ENST00000225696 TERF2Q15554 542 aa14.45□□□□□ -0.1
NUP88-201ENST00000225696 LRRC24Q50LG9 513 aa14.45□□□□□ -0.1
NUP88-201ENST00000225696 ERO1AQ96HE7 468 aa14.45□□□□□ -0.1
NUP88-201ENST00000225696 DSCC1Q9BVC3 393 aa14.45□□□□□ -0.1
NUP88-201ENST00000225696 RFX7Q2KHR2 1363 aa14.45□□□□□ -0.1
NUP88-201ENST00000225696 OSBP2Q969R2 916 aa14.44□□□□□ -0.1
NUP88-201ENST00000225696 HSD3B7Q9H2F3 369 aa14.44□□□□□ -0.1
NUP88-201ENST00000225696 TAOK2Q9UL54 1235 aa14.44□□□□□ -0.1
NUP88-201ENST00000225696 ABCC6O95255 1503 aa14.44□□□□□ -0.1
NUP88-201ENST00000225696 GABPB1Q06547 395 aaPredicted RBP14.44□□□□□ -0.1
NUP88-201ENST00000225696 GOLGA8FQ08AF8 430 aa14.44□□□□□ -0.1
NUP88-201ENST00000225696 GOLGA8DPQ0D2H9 430 aa14.44□□□□□ -0.1
NUP88-201ENST00000225696 HSP90AB3PQ58FF7 597 aa14.44□□□□□ -0.1
NUP88-201ENST00000225696 KRT222Q8N1A0 295 aa14.44□□□□□ -0.1
NUP88-201ENST00000225696 NKX2-3Q8TAU0 364 aa14.44□□□□□ -0.1
NUP88-201ENST00000225696 ZNF274Q96GC6 653 aaPredicted RBP14.44□□□□□ -0.1
NUP88-201ENST00000225696 HELLSQ9NRZ9 838 aa14.44□□□□□ -0.1
NUP88-201ENST00000225696 KCND1Q9NSA2 647 aa14.44□□□□□ -0.1
NUP88-201ENST00000225696 PHRF1Q9P1Y6 1649 aaKnown RBP14.43□□□□□ -0.1
NUP88-201ENST00000225696 LMOD1P29536 600 aaPredicted RBP14.43□□□□□ -0.1
NUP88-201ENST00000225696 HPS5Q9UPZ3 1129 aa14.43□□□□□ -0.1
NUP88-201ENST00000225696 PHKG2P15735 406 aa14.43□□□□□ -0.1
NUP88-201ENST00000225696 STK38Q15208 465 aa14.43□□□□□ -0.1
NUP88-201ENST00000225696 CCDC93Q567U6 631 aa14.43□□□□□ -0.1
NUP88-201ENST00000225696 ATL3Q6DD88 541 aa14.43□□□□□ -0.1
NUP88-201ENST00000225696 DPF2Q92785 391 aa14.43□□□□□ -0.1
NUP88-201ENST00000225696 PUS3Q9BZE2 481 aaKnown RBP14.43□□□□□ -0.1
NUP88-201ENST00000225696 NAT10Q9H0A0 1025 aaKnown RBP14.43□□□□□ -0.1
NUP88-201ENST00000225696 L2HGDHQ9H9P8 463 aa14.43□□□□□ -0.1
NUP88-201ENST00000225696 DENND2AQ9ULE3 1009 aa14.43□□□□□ -0.1
NUP88-201ENST00000225696 RGPD5Q99666 1765 aa14.43□□□□□ -0.1
NUP88-201ENST00000225696 MROH7-TTC4A0A0A0MT08 1334 aa14.42□□□□□ -0.1
NUP88-201ENST00000225696 WDHD1O75717 1129 aaPredicted RBP14.42□□□□□ -0.1
NUP88-201ENST00000225696 ZNF202O95125 648 aa14.42□□□□□ -0.1
NUP88-201ENST00000225696 GSDMDP57764 484 aa14.42□□□□□ -0.1
NUP88-201ENST00000225696 SF3A1Q15459 793 aaKnown RBP14.42□□□□□ -0.1
NUP88-201ENST00000225696 AXDND1Q5T1B0 1012 aaPredicted RBP14.42□□□□□ -0.1
NUP88-201ENST00000225696 AIFM3Q96NN9 605 aa14.42□□□□□ -0.1
NUP88-201ENST00000225696 NLRP2Q9NX02 1062 aa14.42□□□□□ -0.1
NUP88-201ENST00000225696 ADAMTS7Q9UKP4 1686 aa14.42□□□□□ -0.1
NUP88-201ENST00000225696 A0A1W2PQ27 194 aa14.41□□□□□ -0.1
NUP88-201ENST00000225696 A0A1W2PQ64 194 aa14.41□□□□□ -0.1
NUP88-201ENST00000225696 A0A1W2PQD8 194 aa14.41□□□□□ -0.1
NUP88-201ENST00000225696 SPTLC2O15270 562 aa14.41□□□□□ -0.1
NUP88-201ENST00000225696 SNRPA1P09661 255 aaKnown RBP14.41□□□□□ -0.1
NUP88-201ENST00000225696 MARCKSP29966 332 aaPredicted RBP14.41□□□□□ -0.1
NUP88-201ENST00000225696 AFDNP55196 1824 aaKnown RBP14.41□□□□□ -0.1
NUP88-201ENST00000225696 RNF113AO15541 343 aaKnown RBP14.41□□□□□ -0.1
NUP88-201ENST00000225696 SLC3A2P08195 630 aaKnown RBP14.41□□□□□ -0.1
NUP88-201ENST00000225696 H2AFXP16104 143 aaPredicted RBP14.41□□□□□ -0.1
NUP88-201ENST00000225696 GORABQ5T7V8 394 aa14.41□□□□□ -0.1
NUP88-201ENST00000225696 MYSM1Q5VVJ2 828 aa14.41□□□□□ -0.1
NUP88-201ENST00000225696 FBXO18Q8NFZ0 1043 aa14.41□□□□□ -0.1
NUP88-201ENST00000225696 C8orf76Q96K31 380 aa14.41□□□□□ -0.1
NUP88-201ENST00000225696 IMPACTQ9P2X3 320 aa14.41□□□□□ -0.1
NUP88-201ENST00000225696 A0A0U1RQG5 324 aaPredicted RBP14.4□□□□□ -0.1
NUP88-201ENST00000225696 NBPF26B4DH59 902 aa14.4□□□□□ -0.1
NUP88-201ENST00000225696 ZBTB22O15209 634 aa14.4□□□□□ -0.1
NUP88-201ENST00000225696 IFIT1P09914 478 aaKnown RBP14.4□□□□□ -0.1
NUP88-201ENST00000225696 PFKFB1P16118 471 aa14.4□□□□□ -0.1
NUP88-201ENST00000225696 SFPQP23246 707 aaKnown RBP eCLIP14.4□□□□□ -0.1
NUP88-201ENST00000225696 ANTXR2P58335 489 aa14.4□□□□□ -0.1
NUP88-201ENST00000225696 FKBP4Q02790 459 aaKnown RBP eCLIP14.4□□□□□ -0.1
NUP88-201ENST00000225696 NBPF14Q5TI25 921 aa14.4□□□□□ -0.1
NUP88-201ENST00000225696 NBPF10Q6P3W6 841 aaKnown RBP14.4□□□□□ -0.1
NUP88-201ENST00000225696 TTLL7Q6ZT98 887 aa14.4□□□□□ -0.1
NUP88-201ENST00000225696 NBPF15Q8N660 670 aa14.4□□□□□ -0.1
NUP88-201ENST00000225696 RAPGEF4Q8WZA2 1011 aa14.4□□□□□ -0.1
NUP88-201ENST00000225696 KLF18A0A0U1RQI7 1052 aa14.4□□□□□ -0.1
NUP88-201ENST00000225696 A0A1B0GUL7 405 aa14.4□□□□□ -0.1
NUP88-201ENST00000225696 CYP27B1O15528 508 aa14.4□□□□□ -0.1
NUP88-201ENST00000225696 CLCN6P51797 869 aa14.4□□□□□ -0.1
NUP88-201ENST00000225696 EVCP57679 992 aa14.4□□□□□ -0.1
NUP88-201ENST00000225696 POLR3EQ9NVU0 708 aa14.4□□□□□ -0.1
NUP88-201ENST00000225696 ORC3Q9UBD5 711 aaPredicted RBP14.4□□□□□ -0.1
NUP88-201ENST00000225696 FHOD1Q9Y613 1164 aa14.4□□□□□ -0.1
NUP88-201ENST00000225696 GOLGA8BA8MQT2 603 aa14.39□□□□□ -0.11
NUP88-201ENST00000225696 H7C1W4 665 aa14.39□□□□□ -0.11
NUP88-201ENST00000225696 FGAP02671 866 aa14.39□□□□□ -0.11
NUP88-201ENST00000225696 ADORA1P30542 326 aa14.39□□□□□ -0.11
NUP88-201ENST00000225696 NLRP12P59046 1061 aa14.39□□□□□ -0.11
NUP88-201ENST00000225696 FANCCQ00597 558 aa14.39□□□□□ -0.11
NUP88-201ENST00000225696 SCARF1Q14162 830 aa14.39□□□□□ -0.11
NUP88-201ENST00000225696 PI16Q6UXB8 463 aa14.39□□□□□ -0.11
NUP88-201ENST00000225696 BPIFA3Q9BQP9 254 aa14.39□□□□□ -0.11
NUP88-201ENST00000225696 MEGF6O75095 1541 aa14.39□□□□□ -0.11
NUP88-201ENST00000225696 ERICH4A6NGS2 130 aa14.39□□□□□ -0.11
NUP88-201ENST00000225696 PRC1O43663 620 aa14.39□□□□□ -0.11
NUP88-201ENST00000225696 TTC5Q8N0Z6 440 aa14.39□□□□□ -0.11
NUP88-201ENST00000225696 KCNG4Q8TDN1 519 aa14.39□□□□□ -0.11
NUP88-201ENST00000225696 EPC1Q9H2F5 836 aa14.39□□□□□ -0.11
NUP88-201ENST00000225696 DNAI1Q9UI46 699 aa14.39□□□□□ -0.11
NUP88-201ENST00000225696 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.39□□□□□ -0.119e-7■□□□□ 10.1
NUP88-201ENST00000225696 NWD2Q9ULI1 1742 aa14.39□□□□□ -0.11
NUP88-201ENST00000225696 SLIT3O75094 1523 aa14.38□□□□□ -0.11
NUP88-201ENST00000225696 ARFGEF2Q9Y6D5 1785 aa14.38□□□□□ -0.11
NUP88-201ENST00000225696 PSDA5PKW4 1024 aaPredicted RBP14.38□□□□□ -0.11
NUP88-201ENST00000225696 TMEM232C9JQI7 657 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms