RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 PIGBQ92521 554 aa20.19■□□□□ 0.82
USB1-201ENST00000219281 FBXW7Q969H0 707 aa20.19■□□□□ 0.82
USB1-201ENST00000219281 GPHNQ9NQX3 736 aaPredicted RBP20.19■□□□□ 0.82
USB1-201ENST00000219281 ANO10Q9NW15 660 aa20.19■□□□□ 0.82
USB1-201ENST00000219281 ASAP1Q9ULH1 1129 aa20.19■□□□□ 0.82
USB1-201ENST00000219281 CARMIL3Q8ND23 1372 aa20.18■□□□□ 0.82
USB1-201ENST00000219281 FDPSP14324 419 aaKnown RBP20.18■□□□□ 0.82
USB1-201ENST00000219281 PUS3Q9BZE2 481 aaKnown RBP20.18■□□□□ 0.82
USB1-201ENST00000219281 TMOD3Q9NYL9 352 aa20.18■□□□□ 0.82
USB1-201ENST00000219281 PRDM4Q9UKN5 801 aa20.18■□□□□ 0.82
USB1-201ENST00000219281 PAPPAQ13219 1627 aa20.18■□□□□ 0.82
USB1-201ENST00000219281 OSBP2Q969R2 916 aa20.18■□□□□ 0.82
USB1-201ENST00000219281 ZBTB3Q9H5J0 574 aa20.18■□□□□ 0.82
USB1-201ENST00000219281 PCDHA7Q9UN72 937 aa20.18■□□□□ 0.82
USB1-201ENST00000219281 OTUD7BQ6GQQ9 843 aa20.17■□□□□ 0.82
USB1-201ENST00000219281 TOGARAM1Q9Y4F4 1720 aa20.17■□□□□ 0.82
USB1-201ENST00000219281 FKBP4Q02790 459 aaKnown RBP eCLIP20.16■□□□□ 0.82
USB1-201ENST00000219281 NCBP1Q09161 790 aaKnown RBP20.16■□□□□ 0.82
USB1-201ENST00000219281 TICAM2Q86XR7 235 aa20.16■□□□□ 0.82
USB1-201ENST00000219281 AOPEPQ8N6M6 819 aa20.16■□□□□ 0.82
USB1-201ENST00000219281 MRPS27Q92552 414 aaKnown RBP20.16■□□□□ 0.82
USB1-201ENST00000219281 PAXBP1Q9Y5B6 917 aa20.16■□□□□ 0.82
USB1-201ENST00000219281 MYH15Q9Y2K3 1946 aa20.16■□□□□ 0.82
USB1-201ENST00000219281 A0A1B0GVL5 298 aa20.15■□□□□ 0.82
USB1-201ENST00000219281 SPDYE4A6NLX3 237 aa20.15■□□□□ 0.82
USB1-201ENST00000219281 U2AF2P26368 475 aaKnown RBP eCLIP20.15■□□□□ 0.82
USB1-201ENST00000219281 HAND2P61296 217 aa20.15■□□□□ 0.82
USB1-201ENST00000219281 FILIP1Q7Z7B0 1213 aa20.15■□□□□ 0.82
USB1-201ENST00000219281 CEP57L1Q8IYX8 460 aa20.15■□□□□ 0.82
USB1-201ENST00000219281 ATG3Q9NT62 314 aa20.15■□□□□ 0.82
USB1-201ENST00000219281 RTEL1Q9NZ71 1219 aa20.15■□□□□ 0.82
USB1-201ENST00000219281 USP27XA6NNY8 438 aa20.15■□□□□ 0.82
USB1-201ENST00000219281 NEMFO60524 1076 aa20.15■□□□□ 0.82
USB1-201ENST00000219281 FMR1NBQ8N0W7 255 aaPredicted RBP20.15■□□□□ 0.82
USB1-201ENST00000219281 CCDC112Q8NEF3 446 aa20.15■□□□□ 0.82
USB1-201ENST00000219281 ZNF592Q92610 1267 aa20.15■□□□□ 0.82
USB1-201ENST00000219281 SKILP12757 684 aa20.14■□□□□ 0.81
USB1-201ENST00000219281 RBM6P78332 1123 aaKnown RBP20.14■□□□□ 0.81
USB1-201ENST00000219281 CEP135Q66GS9 1140 aa20.14■□□□□ 0.81
USB1-201ENST00000219281 ADALQ6DHV7 355 aa20.14■□□□□ 0.81
USB1-201ENST00000219281 CHMP4CQ96CF2 233 aa20.14■□□□□ 0.81
USB1-201ENST00000219281 SDF4Q9BRK5 362 aa20.14■□□□□ 0.81
USB1-201ENST00000219281 CLIC4Q9Y696 253 aa20.14■□□□□ 0.81
USB1-201ENST00000219281 CIAO1O76071 339 aa20.14■□□□□ 0.81
USB1-201ENST00000219281 POLR3DP05423 398 aaPredicted RBP20.14■□□□□ 0.81
USB1-201ENST00000219281 WASHC4Q2M389 1173 aa20.14■□□□□ 0.81
USB1-201ENST00000219281 DNAJC10Q8IXB1 793 aa20.14■□□□□ 0.81
USB1-201ENST00000219281 CCDC191Q8NCU4 936 aa20.14■□□□□ 0.81
USB1-201ENST00000219281 CEP126Q9P2H0 1117 aa20.14■□□□□ 0.81
USB1-201ENST00000219281 DISP2A7MBM2 1401 aa20.13■□□□□ 0.81
USB1-201ENST00000219281 CCDC69A6NI79 296 aa20.13■□□□□ 0.81
USB1-201ENST00000219281 NDUFA8P51970 172 aa20.13■□□□□ 0.81
USB1-201ENST00000219281 FOXP2O15409 715 aa20.13■□□□□ 0.81
USB1-201ENST00000219281 ADORA1P30542 326 aa20.13■□□□□ 0.81
USB1-201ENST00000219281 EVCP57679 992 aa20.13■□□□□ 0.81
USB1-201ENST00000219281 NAA30Q147X3 362 aaPredicted RBP20.13■□□□□ 0.81
USB1-201ENST00000219281 SF3A1Q15459 793 aaKnown RBP20.13■□□□□ 0.81
USB1-201ENST00000219281 TTC39AQ5SRH9 613 aa20.13■□□□□ 0.81
USB1-201ENST00000219281 GORABQ5T7V8 394 aa20.13■□□□□ 0.81
USB1-201ENST00000219281 LINC00301Q8NCQ3 95 aa20.13■□□□□ 0.81
USB1-201ENST00000219281 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.13■□□□□ 0.81
USB1-201ENST00000219281 NAT10Q9H0A0 1025 aaKnown RBP20.13■□□□□ 0.81
USB1-201ENST00000219281 STK38Q15208 465 aa20.12■□□□□ 0.81
USB1-201ENST00000219281 SYCP1Q15431 976 aa20.12■□□□□ 0.81
USB1-201ENST00000219281 IMMTQ16891 758 aaKnown RBP20.12■□□□□ 0.81
USB1-201ENST00000219281 CCDC158Q5M9N0 1113 aa20.12■□□□□ 0.81
USB1-201ENST00000219281 FBXL16Q8N461 479 aa20.12■□□□□ 0.81
USB1-201ENST00000219281 C8orf76Q96K31 380 aa20.12■□□□□ 0.81
USB1-201ENST00000219281 CTNNA3Q9UI47 895 aa20.12■□□□□ 0.81
USB1-201ENST00000219281 A0A1W2PQ27 194 aa20.11■□□□□ 0.81
USB1-201ENST00000219281 A0A1W2PQ64 194 aa20.11■□□□□ 0.81
USB1-201ENST00000219281 A0A1W2PQD8 194 aa20.11■□□□□ 0.81
USB1-201ENST00000219281 PRC1O43663 620 aa20.11■□□□□ 0.81
USB1-201ENST00000219281 ZSCAN20P17040 1043 aaPredicted RBP20.11■□□□□ 0.81
USB1-201ENST00000219281 HSP90AB3PQ58FF7 597 aa20.11■□□□□ 0.81
USB1-201ENST00000219281 RAB11FIP4Q86YS3 637 aa20.11■□□□□ 0.81
USB1-201ENST00000219281 KLF18A0A0U1RQI7 1052 aa20.11■□□□□ 0.81
USB1-201ENST00000219281 FGAP02671 866 aa20.11■□□□□ 0.81
USB1-201ENST00000219281 CCZ1BP86790 482 aa20.11■□□□□ 0.81
USB1-201ENST00000219281 CCZ1P86791 482 aaPredicted RBP20.11■□□□□ 0.81
USB1-201ENST00000219281 NUP188Q5SRE5 1749 aa20.11■□□□□ 0.81
USB1-201ENST00000219281 XAGE2Q96GT9 111 aa20.1■□□□□ 0.81
USB1-201ENST00000219281 SLC4A9Q96Q91 983 aa20.1■□□□□ 0.81
USB1-201ENST00000219281 ISCA1Q9BUE6 129 aa20.1■□□□□ 0.81
USB1-201ENST00000219281 BCL11BQ9C0K0 894 aaPredicted RBP20.1■□□□□ 0.81
USB1-201ENST00000219281 TRMT1Q9NXH9 659 aaKnown RBP20.1■□□□□ 0.81
USB1-201ENST00000219281 ROBO1Q9Y6N7 1651 aa20.1■□□□□ 0.81
USB1-201ENST00000219281 GOLGA8BA8MQT2 603 aa20.1■□□□□ 0.81
USB1-201ENST00000219281 PTPN14Q15678 1187 aa20.1■□□□□ 0.81
USB1-201ENST00000219281 CCDC57Q2TAC2 916 aa20.1■□□□□ 0.81
USB1-201ENST00000219281 LRRFIP1Q32MZ4 808 aaKnown RBP20.1■□□□□ 0.81
USB1-201ENST00000219281 GJB4Q9NTQ9 266 aa20.1■□□□□ 0.81
USB1-201ENST00000219281 KIAA1468Q9P260 1216 aa20.1■□□□□ 0.81
USB1-201ENST00000219281 ORC3Q9UBD5 711 aaPredicted RBP20.1■□□□□ 0.81
USB1-201ENST00000219281 HPS5Q9UPZ3 1129 aa20.1■□□□□ 0.81
USB1-201ENST00000219281 DMTNQ08495 405 aa20.09■□□□□ 0.81
USB1-201ENST00000219281 CCDC85AQ96PX6 553 aaPredicted RBP20.09■□□□□ 0.81
USB1-201ENST00000219281 TJP1Q07157 1748 aa20.09■□□□□ 0.81
USB1-201ENST00000219281 SPTLC2O15270 562 aa20.09■□□□□ 0.81
USB1-201ENST00000219281 TCIRG1Q13488 830 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms