RNA–Protein interactions for RNA: ENST00000218364.4

HTATSF1-201, Transcript of HIV-1 Tat specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTATSF1, Length 2,775 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-201ENST00000218364 CIAO1O76071 339 aa25.81■■□□□ 1.72
HTATSF1-201ENST00000218364 NBPF11Q86T75 865 aa25.81■■□□□ 1.72
HTATSF1-201ENST00000218364 ATG3Q9NT62 314 aa25.81■■□□□ 1.72
HTATSF1-201ENST00000218364 CWC25Q9NXE8 425 aaPredicted RBP25.81■■□□□ 1.72
HTATSF1-201ENST00000218364 NAP1L2Q9ULW6 460 aaPredicted RBP25.81■■□□□ 1.72
HTATSF1-201ENST00000218364 COL18A1P39060 1754 aa25.81■■□□□ 1.72
HTATSF1-201ENST00000218364 M0R2C6 588 aa25.8■■□□□ 1.72
HTATSF1-201ENST00000218364 NAA30Q147X3 362 aaPredicted RBP25.8■■□□□ 1.72
HTATSF1-201ENST00000218364 CHST3Q7LGC8 479 aa25.8■■□□□ 1.72
HTATSF1-201ENST00000218364 PKD1L3Q7Z443 1732 aa25.8■■□□□ 1.72
HTATSF1-201ENST00000218364 NBPF26B4DH59 902 aa25.8■■□□□ 1.72
HTATSF1-201ENST00000218364 YEATS4O95619 227 aa25.8■■□□□ 1.72
HTATSF1-201ENST00000218364 NBPF14Q5TI25 921 aa25.8■■□□□ 1.72
HTATSF1-201ENST00000218364 NBPF10Q6P3W6 841 aaKnown RBP25.8■■□□□ 1.72
HTATSF1-201ENST00000218364 NBPF15Q8N660 670 aa25.8■■□□□ 1.72
HTATSF1-201ENST00000218364 KCNG4Q8TDN1 519 aa25.8■■□□□ 1.72
HTATSF1-201ENST00000218364 ZNF592Q92610 1267 aa25.8■■□□□ 1.72
HTATSF1-201ENST00000218364 SDF4Q9BRK5 362 aa25.8■■□□□ 1.72
HTATSF1-201ENST00000218364 POLR3EQ9NVU0 708 aa25.8■■□□□ 1.72
HTATSF1-201ENST00000218364 KIAA1468Q9P260 1216 aa25.8■■□□□ 1.72
HTATSF1-201ENST00000218364 CABP4P57796 275 aa25.79■■□□□ 1.72
HTATSF1-201ENST00000218364 ATF3P18847 181 aa25.79■■□□□ 1.72
HTATSF1-201ENST00000218364 NDUFA8P51970 172 aa25.79■■□□□ 1.72
HTATSF1-201ENST00000218364 TTLL5Q6EMB2 1281 aa25.79■■□□□ 1.72
HTATSF1-201ENST00000218364 DDX41Q9UJV9 622 aaKnown RBP25.79■■□□□ 1.72
HTATSF1-201ENST00000218364 NEDD4P46934 1319 aa25.79■■□□□ 1.72
HTATSF1-201ENST00000218364 TJP1Q07157 1748 aa25.79■■□□□ 1.72
HTATSF1-201ENST00000218364 A0A1B0GUL7 405 aa25.78■■□□□ 1.72
HTATSF1-201ENST00000218364 LRRC24Q50LG9 513 aa25.78■■□□□ 1.72
HTATSF1-201ENST00000218364 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP25.78■■□□□ 1.72
HTATSF1-201ENST00000218364 A0A1B0GVL5 298 aa25.78■■□□□ 1.72
HTATSF1-201ENST00000218364 KIF2AO00139 706 aaPredicted RBP25.78■■□□□ 1.72
HTATSF1-201ENST00000218364 ERCC4Q92889 916 aaPredicted RBP25.78■■□□□ 1.72
HTATSF1-201ENST00000218364 OSBP2Q969R2 916 aa25.78■■□□□ 1.72
HTATSF1-201ENST00000218364 PPFIA3O75145 1194 aa25.78■■□□□ 1.72
HTATSF1-201ENST00000218364 CLIC4Q9Y696 253 aa25.77■■□□□ 1.72
HTATSF1-201ENST00000218364 KIF20AO95235 890 aa25.77■■□□□ 1.72
HTATSF1-201ENST00000218364 STK38Q15208 465 aa25.77■■□□□ 1.72
HTATSF1-201ENST00000218364 BRAPQ7Z569 592 aa25.77■■□□□ 1.72
HTATSF1-201ENST00000218364 FBXO18Q8NFZ0 1043 aa25.77■■□□□ 1.72
HTATSF1-201ENST00000218364 ZHX1Q9UKY1 873 aaPredicted RBP25.77■■□□□ 1.72
HTATSF1-201ENST00000218364 NUP188Q5SRE5 1749 aa25.77■■□□□ 1.72
HTATSF1-201ENST00000218364 LRRFIP1Q32MZ4 808 aaKnown RBP25.76■■□□□ 1.71
HTATSF1-201ENST00000218364 RGS22Q8NE09 1264 aa25.76■■□□□ 1.71
HTATSF1-201ENST00000218364 C8orf76Q96K31 380 aa25.76■■□□□ 1.71
HTATSF1-201ENST00000218364 FOXP2O15409 715 aa25.76■■□□□ 1.71
HTATSF1-201ENST00000218364 DHX16O60231 1041 aaKnown RBP25.76■■□□□ 1.71
HTATSF1-201ENST00000218364 ZNF215Q9UL58 517 aaPredicted RBP25.76■■□□□ 1.71
HTATSF1-201ENST00000218364 MORC2Q9Y6X9 1032 aaPredicted RBP25.76■■□□□ 1.71
HTATSF1-201ENST00000218364 DPCR1Q3MIW9 517 aa25.75■■□□□ 1.71
HTATSF1-201ENST00000218364 CCDC191Q8NCU4 936 aa25.75■■□□□ 1.71
HTATSF1-201ENST00000218364 KIF18AQ8NI77 898 aa25.75■■□□□ 1.71
HTATSF1-201ENST00000218364 ERO1AQ96HE7 468 aa25.75■■□□□ 1.71
HTATSF1-201ENST00000218364 GPHNQ9NQX3 736 aaPredicted RBP25.75■■□□□ 1.71
HTATSF1-201ENST00000218364 SF3A1Q15459 793 aaKnown RBP25.75■■□□□ 1.71
HTATSF1-201ENST00000218364 TTLL7Q6ZT98 887 aa25.75■■□□□ 1.71
HTATSF1-201ENST00000218364 HPS5Q9UPZ3 1129 aa25.75■■□□□ 1.71
HTATSF1-201ENST00000218364 PARP4Q9UKK3 1724 aaKnown RBP25.75■■□□□ 1.71
HTATSF1-201ENST00000218364 NWD2Q9ULI1 1742 aa25.75■■□□□ 1.71
HTATSF1-201ENST00000218364 SPTLC2O15270 562 aa25.74■■□□□ 1.71
HTATSF1-201ENST00000218364 CSB-PGBD3P0DP91 1061 aa25.74■■□□□ 1.71
HTATSF1-201ENST00000218364 DHX8Q14562 1220 aaKnown RBP25.74■■□□□ 1.71
HTATSF1-201ENST00000218364 MYSM1Q5VVJ2 828 aa25.74■■□□□ 1.71
HTATSF1-201ENST00000218364 MB21D2Q8IYB1 491 aaPredicted RBP25.74■■□□□ 1.71
HTATSF1-201ENST00000218364 TRMT1Q9NXH9 659 aaKnown RBP25.74■■□□□ 1.71
HTATSF1-201ENST00000218364 ZFYP08048 801 aaPredicted RBP25.74■■□□□ 1.71
HTATSF1-201ENST00000218364 KCNJ6P48051 423 aa25.74■■□□□ 1.71
HTATSF1-201ENST00000218364 IMMTQ16891 758 aaKnown RBP25.74■■□□□ 1.71
HTATSF1-201ENST00000218364 OTUD7BQ6GQQ9 843 aa25.74■■□□□ 1.71
HTATSF1-201ENST00000218364 CCDC150Q8NCX0 1101 aa25.74■■□□□ 1.71
HTATSF1-201ENST00000218364 ZNF397Q8NF99 534 aaPredicted RBP25.74■■□□□ 1.71
HTATSF1-201ENST00000218364 ZNF594Q96JF6 807 aaPredicted RBP25.74■■□□□ 1.71
HTATSF1-201ENST00000218364 NLRP12P59046 1061 aa25.73■■□□□ 1.71
HTATSF1-201ENST00000218364 CADPS2Q86UW7 1296 aa25.73■■□□□ 1.71
HTATSF1-201ENST00000218364 PRC1O43663 620 aa25.72■■□□□ 1.71
HTATSF1-201ENST00000218364 ZRSR1Q15695 479 aaKnown RBP25.72■■□□□ 1.71
HTATSF1-201ENST00000218364 XPO4Q9C0E2 1151 aaKnown RBP25.72■■□□□ 1.71
HTATSF1-201ENST00000218364 ORC3Q9UBD5 711 aaPredicted RBP25.72■■□□□ 1.71
HTATSF1-201ENST00000218364 WDR19Q8NEZ3 1342 aa25.72■■□□□ 1.71
HTATSF1-201ENST00000218364 DCCP43146 1447 aa25.72■■□□□ 1.71
HTATSF1-201ENST00000218364 E4F1Q66K89 784 aaPredicted RBP25.72■■□□□ 1.71
HTATSF1-201ENST00000218364 PUS3Q9BZE2 481 aaKnown RBP25.72■■□□□ 1.71
HTATSF1-201ENST00000218364 KLF18A0A0U1RQI7 1052 aa25.71■■□□□ 1.71
HTATSF1-201ENST00000218364 PSDA5PKW4 1024 aaPredicted RBP25.71■■□□□ 1.71
HTATSF1-201ENST00000218364 POLR3DP05423 398 aaPredicted RBP25.71■■□□□ 1.71
HTATSF1-201ENST00000218364 SLC3A2P08195 630 aaKnown RBP25.71■■□□□ 1.71
HTATSF1-201ENST00000218364 AXDND1Q5T1B0 1012 aaPredicted RBP25.71■■□□□ 1.71
HTATSF1-201ENST00000218364 FBXW7Q969H0 707 aa25.71■■□□□ 1.71
HTATSF1-201ENST00000218364 CEP126Q9P2H0 1117 aa25.71■■□□□ 1.71
HTATSF1-201ENST00000218364 DDX60Q8IY21 1712 aaKnown RBP25.71■■□□□ 1.71
HTATSF1-201ENST00000218364 ZNF202O95125 648 aa25.71■■□□□ 1.71
HTATSF1-201ENST00000218364 CMA1P23946 247 aa25.71■■□□□ 1.71
HTATSF1-201ENST00000218364 NCAPHQ15003 741 aa25.71■■□□□ 1.71
HTATSF1-201ENST00000218364 SLU7O95391 586 aaKnown RBP25.7■■□□□ 1.71
HTATSF1-201ENST00000218364 FGAP02671 866 aa25.7■■□□□ 1.71
HTATSF1-201ENST00000218364 GABPB1Q06547 395 aaPredicted RBP25.7■■□□□ 1.71
HTATSF1-201ENST00000218364 CCDC158Q5M9N0 1113 aa25.7■■□□□ 1.71
HTATSF1-201ENST00000218364 ARMCX5Q6P1M9 558 aa25.7■■□□□ 1.71
HTATSF1-201ENST00000218364 IFNKQ9P0W0 207 aa25.7■■□□□ 1.71
HTATSF1-201ENST00000218364 FBXO3Q9UK99 471 aa25.7■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms