RNA–Protein interactions for RNA: ENST00000217109.8

CSTF1-201, Transcript of cleavage stimulation factor subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF1, Length 4,290 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-201ENST00000217109 RIMBP3CA6NJZ7 1639 aa11.3□□□□□ -0.6
CSTF1-201ENST00000217109 RIMBP3BA6NNM3 1639 aa11.3□□□□□ -0.6
CSTF1-201ENST00000217109 RIMBP3Q9UFD9 1639 aa11.3□□□□□ -0.6
CSTF1-201ENST00000217109 KIF18AQ8NI77 898 aa11.29□□□□□ -0.6
CSTF1-201ENST00000217109 PCMTD1Q96MG8 357 aaPredicted RBP11.29□□□□□ -0.6
CSTF1-201ENST00000217109 PYCARDQ9ULZ3 195 aa11.29□□□□□ -0.6
CSTF1-201ENST00000217109 MRVI1Q9Y6F6 885 aa11.29□□□□□ -0.6
CSTF1-201ENST00000217109 RPAP1Q9BWH6 1393 aaPredicted RBP11.29□□□□□ -0.6
CSTF1-201ENST00000217109 ZNF75DP51815 510 aa11.29□□□□□ -0.6
CSTF1-201ENST00000217109 CEP135Q66GS9 1140 aa11.29□□□□□ -0.6
CSTF1-201ENST00000217109 AMOTL1Q8IY63 956 aa11.29□□□□□ -0.6
CSTF1-201ENST00000217109 WASF1Q92558 559 aa11.29□□□□□ -0.6
CSTF1-201ENST00000217109 DIP2AQ14689 1571 aa11.29□□□□□ -0.6
CSTF1-201ENST00000217109 PFKFB2O60825 505 aa11.29□□□□□ -0.6
CSTF1-201ENST00000217109 PDIA3P30101 505 aaKnown RBP11.29□□□□□ -0.6
CSTF1-201ENST00000217109 ADD1P35611 737 aaKnown RBP11.29□□□□□ -0.6
CSTF1-201ENST00000217109 TSR1Q2NL82 804 aaKnown RBP11.29□□□□□ -0.6
CSTF1-201ENST00000217109 OSBP2Q969R2 916 aa11.29□□□□□ -0.6
CSTF1-201ENST00000217109 IFNKQ9P0W0 207 aa11.29□□□□□ -0.6
CSTF1-201ENST00000217109 MBD4O95243 580 aa11.29□□□□□ -0.6
CSTF1-201ENST00000217109 UQCRFS1P1P0C7P4 283 aa11.29□□□□□ -0.6
CSTF1-201ENST00000217109 CCDC102BQ68D86 513 aa11.29□□□□□ -0.6
CSTF1-201ENST00000217109 SYNE4Q8N205 404 aa11.29□□□□□ -0.6
CSTF1-201ENST00000217109 ANKRD20A12PQ8NF67 263 aa11.29□□□□□ -0.6
CSTF1-201ENST00000217109 MAST3O60307 1309 aa11.28□□□□□ -0.6
CSTF1-201ENST00000217109 TOP1P11387 765 aaKnown RBP11.28□□□□□ -0.6
CSTF1-201ENST00000217109 PDIA6Q15084 440 aa11.28□□□□□ -0.6
CSTF1-201ENST00000217109 SPECC1Q5M775 1068 aa11.28□□□□□ -0.6
CSTF1-201ENST00000217109 NAA16Q6N069 864 aaPredicted RBP11.28□□□□□ -0.6
CSTF1-201ENST00000217109 NSUN7Q8NE18 718 aaKnown RBP11.28□□□□□ -0.6
CSTF1-201ENST00000217109 UBE2Q2Q8WVN8 375 aa11.28□□□□□ -0.6
CSTF1-201ENST00000217109 ITSN1Q15811 1721 aa11.28□□□□□ -0.6
CSTF1-201ENST00000217109 CYP7A1P22680 504 aa11.28□□□□□ -0.6
CSTF1-201ENST00000217109 WTAPQ15007 396 aa11.28□□□□□ -0.6
CSTF1-201ENST00000217109 TMEM87AQ8NBN3 555 aa11.28□□□□□ -0.6
CSTF1-201ENST00000217109 CPLX3Q8WVH0 158 aa11.28□□□□□ -0.6
CSTF1-201ENST00000217109 NIP7Q9Y221 180 aaKnown RBP eCLIP11.28□□□□□ -0.6
CSTF1-201ENST00000217109 CCDC196A0A1B0GTZ2 297 aa11.28□□□□□ -0.6
CSTF1-201ENST00000217109 ERVV-2B6SEH9 535 aa11.28□□□□□ -0.6
CSTF1-201ENST00000217109 RIOK3O14730 519 aaKnown RBP11.28□□□□□ -0.6
CSTF1-201ENST00000217109 ATP6V1AP38606 617 aa11.28□□□□□ -0.6
CSTF1-201ENST00000217109 ZMYM1Q5SVZ6 1142 aa11.28□□□□□ -0.6
CSTF1-201ENST00000217109 GJB4Q9NTQ9 266 aa11.28□□□□□ -0.6
CSTF1-201ENST00000217109 G3V3G9 751 aa11.27□□□□□ -0.6
CSTF1-201ENST00000217109 CBFA2T2O43439 604 aa11.27□□□□□ -0.6
CSTF1-201ENST00000217109 CAVIN4Q5BKX8 364 aa11.27□□□□□ -0.6
CSTF1-201ENST00000217109 DCAF8Q5TAQ9 597 aa11.27□□□□□ -0.6
CSTF1-201ENST00000217109 ZMYND15Q9H091 742 aa11.27□□□□□ -0.6
CSTF1-201ENST00000217109 GREM2Q9H772 168 aa11.27□□□□□ -0.6
CSTF1-201ENST00000217109 ARMT1Q9H993 441 aa11.27□□□□□ -0.6
CSTF1-201ENST00000217109 SLAIN2Q9P270 581 aa11.27□□□□□ -0.6
CSTF1-201ENST00000217109 ANGEL1Q9UNK9 670 aaKnown RBP11.27□□□□□ -0.6
CSTF1-201ENST00000217109 M0R2C6 588 aa11.27□□□□□ -0.61
CSTF1-201ENST00000217109 ZNF532Q9HCE3 1301 aa11.27□□□□□ -0.61
CSTF1-201ENST00000217109 NBPF26B4DH59 902 aa11.27□□□□□ -0.61
CSTF1-201ENST00000217109 URI1O94763 535 aaPredicted RBP11.27□□□□□ -0.61
CSTF1-201ENST00000217109 UBASH3AP57075 661 aa11.27□□□□□ -0.61
CSTF1-201ENST00000217109 PIP4K2BP78356 416 aa11.27□□□□□ -0.61
CSTF1-201ENST00000217109 NBPF14Q5TI25 921 aa11.27□□□□□ -0.61
CSTF1-201ENST00000217109 NBPF10Q6P3W6 841 aaKnown RBP11.27□□□□□ -0.61
CSTF1-201ENST00000217109 NBPF15Q8N660 670 aa11.27□□□□□ -0.61
CSTF1-201ENST00000217109 ADGRL3Q9HAR2 1447 aa11.27□□□□□ -0.61
CSTF1-201ENST00000217109 CTDSPL2Q05D32 466 aa11.26□□□□□ -0.61
CSTF1-201ENST00000217109 RTN1Q16799 776 aa11.26□□□□□ -0.61
CSTF1-201ENST00000217109 H7C1W4 665 aa11.26□□□□□ -0.61
CSTF1-201ENST00000217109 NEMFO60524 1076 aa11.26□□□□□ -0.61
CSTF1-201ENST00000217109 GSDMDP57764 484 aa11.26□□□□□ -0.61
CSTF1-201ENST00000217109 ANO1Q5XXA6 986 aa11.26□□□□□ -0.61
CSTF1-201ENST00000217109 IQCA1Q86XH1 822 aa11.26□□□□□ -0.61
CSTF1-201ENST00000217109 MYRIPQ8NFW9 859 aa11.26□□□□□ -0.61
CSTF1-201ENST00000217109 SNW1Q13573 536 aaKnown RBP11.26□□□□□ -0.61
CSTF1-201ENST00000217109 PPFIBP1Q86W92 1011 aa11.26□□□□□ -0.61
CSTF1-201ENST00000217109 PUS7LQ9H0K6 701 aaKnown RBP11.26□□□□□ -0.61
CSTF1-201ENST00000217109 JAG2Q9Y219 1238 aa11.26□□□□□ -0.61
CSTF1-201ENST00000217109 REREQ9P2R6 1566 aa11.26□□□□□ -0.61
CSTF1-201ENST00000217109 ZNF202O95125 648 aa11.26□□□□□ -0.61
CSTF1-201ENST00000217109 AFMP43652 599 aa11.26□□□□□ -0.61
CSTF1-201ENST00000217109 FILIP1LQ4L180 1135 aa11.26□□□□□ -0.61
CSTF1-201ENST00000217109 CMTR1Q8N1G2 835 aaKnown RBP11.26□□□□□ -0.61
CSTF1-201ENST00000217109 ZNF274Q96GC6 653 aaPredicted RBP11.26□□□□□ -0.61
CSTF1-201ENST00000217109 PGBD1Q96JS3 809 aa11.26□□□□□ -0.61
CSTF1-201ENST00000217109 RNF41Q9H4P4 317 aaPredicted RBP11.26□□□□□ -0.61
CSTF1-201ENST00000217109 USP42Q9H9J4 1324 aaKnown RBP11.26□□□□□ -0.61
CSTF1-201ENST00000217109 PCDHA7Q9UN72 937 aa11.26□□□□□ -0.61
CSTF1-201ENST00000217109 ELP1O95163 1332 aa11.25□□□□□ -0.61
CSTF1-201ENST00000217109 SNAP23O00161 211 aa11.25□□□□□ -0.61
CSTF1-201ENST00000217109 CCDC152Q4G0S7 254 aa11.25□□□□□ -0.61
CSTF1-201ENST00000217109 BRAPQ7Z569 592 aa11.25□□□□□ -0.61
CSTF1-201ENST00000217109 RESTQ13127 1097 aa11.25□□□□□ -0.61
CSTF1-201ENST00000217109 MYSM1Q5VVJ2 828 aa11.25□□□□□ -0.61
CSTF1-201ENST00000217109 ARGLU1Q9NWB6 273 aaPredicted RBP11.25□□□□□ -0.61
CSTF1-201ENST00000217109 DACH1Q9UI36 760 aa11.25□□□□□ -0.61
CSTF1-201ENST00000217109 CLIC4Q9Y696 253 aa11.25□□□□□ -0.61
CSTF1-201ENST00000217109 HEG1Q9ULI3 1381 aa11.25□□□□□ -0.61
CSTF1-201ENST00000217109 PRDM1O75626 825 aa11.25□□□□□ -0.61
CSTF1-201ENST00000217109 hCG_1642624A0A1W2PR95 340 aa11.24□□□□□ -0.61
CSTF1-201ENST00000217109 IGSF3O75054 1194 aa11.24□□□□□ -0.61
CSTF1-201ENST00000217109 PHKA1P46020 1223 aa11.24□□□□□ -0.61
CSTF1-201ENST00000217109 KRT40Q6A162 431 aa11.24□□□□□ -0.61
CSTF1-201ENST00000217109 STOX1Q6ZVD7 989 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms