RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 WDR19Q8NEZ3 1342 aa15.53■□□□□ 0.08
SRP54-201ENST00000216774 FAM177BA6PVY3 158 aa15.53■□□□□ 0.08
SRP54-201ENST00000216774 A1BGP04217 495 aa15.53■□□□□ 0.08
SRP54-201ENST00000216774 TTLL5Q6EMB2 1281 aa15.53■□□□□ 0.08
SRP54-201ENST00000216774 CHST3Q7LGC8 479 aa15.53■□□□□ 0.08
SRP54-201ENST00000216774 ZCRB1Q8TBF4 217 aaKnown RBP15.53■□□□□ 0.08
SRP54-201ENST00000216774 KCNG4Q8TDN1 519 aa15.53■□□□□ 0.08
SRP54-201ENST00000216774 ARID3AQ99856 593 aa15.53■□□□□ 0.08
SRP54-201ENST00000216774 ZBTB3Q9H5J0 574 aa15.53■□□□□ 0.08
SRP54-201ENST00000216774 YEATS4O95619 227 aa15.52■□□□□ 0.08
SRP54-201ENST00000216774 NKX1-1Q15270 411 aaPredicted RBP15.52■□□□□ 0.08
SRP54-201ENST00000216774 TPD52L1Q16890 204 aaPredicted RBP15.52■□□□□ 0.08
SRP54-201ENST00000216774 TTC39AQ5SRH9 613 aa15.52■□□□□ 0.08
SRP54-201ENST00000216774 BRAPQ7Z569 592 aa15.52■□□□□ 0.08
SRP54-201ENST00000216774 POLR3EQ9NVU0 708 aa15.52■□□□□ 0.08
SRP54-201ENST00000216774 FOXP2O15409 715 aa15.52■□□□□ 0.07
SRP54-201ENST00000216774 GUCY1B3Q02153 619 aa15.52■□□□□ 0.07
SRP54-201ENST00000216774 FKBP4Q02790 459 aaKnown RBP eCLIP15.52■□□□□ 0.07
SRP54-201ENST00000216774 CCDC57Q2TAC2 916 aa15.52■□□□□ 0.07
SRP54-201ENST00000216774 PPP4R3BQ5MIZ7 849 aa15.52■□□□□ 0.07
SRP54-201ENST00000216774 LINC00301Q8NCQ3 95 aa15.52■□□□□ 0.07
SRP54-201ENST00000216774 PKNOX2Q96KN3 472 aa15.52■□□□□ 0.07
SRP54-201ENST00000216774 ISCA1Q9BUE6 129 aa15.52■□□□□ 0.07
SRP54-201ENST00000216774 PUS3Q9BZE2 481 aaKnown RBP15.52■□□□□ 0.07
SRP54-201ENST00000216774 NWD2Q9ULI1 1742 aa15.52■□□□□ 0.07
SRP54-201ENST00000216774 TNS2Q63HR2 1409 aa15.51■□□□□ 0.07
SRP54-201ENST00000216774 GORABQ5T7V8 394 aa15.51■□□□□ 0.07
SRP54-201ENST00000216774 MB21D2Q8IYB1 491 aaPredicted RBP15.51■□□□□ 0.07
SRP54-201ENST00000216774 FBXO18Q8NFZ0 1043 aa15.51■□□□□ 0.07
SRP54-201ENST00000216774 C8orf76Q96K31 380 aa15.51■□□□□ 0.07
SRP54-201ENST00000216774 BPIFA3Q9BQP9 254 aa15.51■□□□□ 0.07
SRP54-201ENST00000216774 DDX60Q8IY21 1712 aaKnown RBP15.51■□□□□ 0.07
SRP54-201ENST00000216774 PRC1O43663 620 aa15.51■□□□□ 0.07
SRP54-201ENST00000216774 CADPS2Q86UW7 1296 aa15.51■□□□□ 0.07
SRP54-201ENST00000216774 APPBP2Q92624 585 aa15.51■□□□□ 0.07
SRP54-201ENST00000216774 SDF4Q9BRK5 362 aa15.51■□□□□ 0.07
SRP54-201ENST00000216774 KCND1Q9NSA2 647 aa15.51■□□□□ 0.07
SRP54-201ENST00000216774 WDR17Q8IZU2 1322 aa15.5■□□□□ 0.07
SRP54-201ENST00000216774 GSDMDP57764 484 aa15.5■□□□□ 0.07
SRP54-201ENST00000216774 TRIM28Q13263 835 aaKnown RBP15.5■□□□□ 0.07
SRP54-201ENST00000216774 WASHC4Q2M389 1173 aa15.5■□□□□ 0.07
SRP54-201ENST00000216774 CCDC112Q8NEF3 446 aa15.5■□□□□ 0.07
SRP54-201ENST00000216774 XAGE2Q96GT9 111 aa15.5■□□□□ 0.07
SRP54-201ENST00000216774 GOLGA8BA8MQT2 603 aa15.5■□□□□ 0.07
SRP54-201ENST00000216774 FGAP02671 866 aa15.5■□□□□ 0.07
SRP54-201ENST00000216774 SKILP12757 684 aa15.5■□□□□ 0.07
SRP54-201ENST00000216774 NCBP1Q09161 790 aaKnown RBP15.5■□□□□ 0.07
SRP54-201ENST00000216774 TCIRG1Q13488 830 aa15.5■□□□□ 0.07
SRP54-201ENST00000216774 STK38Q15208 465 aa15.5■□□□□ 0.07
SRP54-201ENST00000216774 SF3A1Q15459 793 aaKnown RBP15.5■□□□□ 0.07
SRP54-201ENST00000216774 NCOA7Q8NI08 942 aa15.5■□□□□ 0.07
SRP54-201ENST00000216774 PLA2G12BQ9BX93 195 aa15.5■□□□□ 0.07
SRP54-201ENST00000216774 IMPACTQ9P2X3 320 aa15.5■□□□□ 0.07
SRP54-201ENST00000216774 HPS5Q9UPZ3 1129 aa15.5■□□□□ 0.07
SRP54-201ENST00000216774 KLF18A0A0U1RQI7 1052 aa15.49■□□□□ 0.07
SRP54-201ENST00000216774 NDUFA8P51970 172 aa15.49■□□□□ 0.07
SRP54-201ENST00000216774 CEP135Q66GS9 1140 aa15.49■□□□□ 0.07
SRP54-201ENST00000216774 AEBP2Q6ZN18 517 aaPredicted RBP15.49■□□□□ 0.07
SRP54-201ENST00000216774 AOPEPQ8N6M6 819 aa15.49■□□□□ 0.07
SRP54-201ENST00000216774 KIAA1468Q9P260 1216 aa15.49■□□□□ 0.07
SRP54-201ENST00000216774 ORC3Q9UBD5 711 aaPredicted RBP15.49■□□□□ 0.07
SRP54-201ENST00000216774 SPTLC2O15270 562 aa15.48■□□□□ 0.07
SRP54-201ENST00000216774 PPFIA3O75145 1194 aa15.48■□□□□ 0.07
SRP54-201ENST00000216774 ADORA1P30542 326 aa15.48■□□□□ 0.07
SRP54-201ENST00000216774 ZRSR1Q15695 479 aaKnown RBP15.48■□□□□ 0.07
SRP54-201ENST00000216774 MYSM1Q5VVJ2 828 aa15.48■□□□□ 0.07
SRP54-201ENST00000216774 NYAP1Q6ZVC0 841 aa15.48■□□□□ 0.07
SRP54-201ENST00000216774 RALYLQ86SE5 291 aaKnown RBP15.48■□□□□ 0.07
SRP54-201ENST00000216774 GPHNQ9NQX3 736 aaPredicted RBP15.48■□□□□ 0.07
SRP54-201ENST00000216774 CLIC4Q9Y696 253 aa15.48■□□□□ 0.07
SRP54-201ENST00000216774 A0A1B0GVL5 298 aa15.48■□□□□ 0.07
SRP54-201ENST00000216774 CCDC69A6NI79 296 aa15.48■□□□□ 0.07
SRP54-201ENST00000216774 CPLX1O14810 134 aa15.48■□□□□ 0.07
SRP54-201ENST00000216774 HAND2P61296 217 aa15.48■□□□□ 0.07
SRP54-201ENST00000216774 CCZ1BP86790 482 aa15.48■□□□□ 0.07
SRP54-201ENST00000216774 CCZ1P86791 482 aaPredicted RBP15.48■□□□□ 0.07
SRP54-201ENST00000216774 DHX8Q14562 1220 aaKnown RBP15.48■□□□□ 0.07
SRP54-201ENST00000216774 OSBPL5Q9H0X9 879 aaPredicted RBP15.48■□□□□ 0.07
SRP54-201ENST00000216774 ZNF213O14771 459 aa15.47■□□□□ 0.07
SRP54-201ENST00000216774 PCCAP05165 728 aaPredicted RBP15.47■□□□□ 0.07
SRP54-201ENST00000216774 ANTXR2P58335 489 aa15.47■□□□□ 0.07
SRP54-201ENST00000216774 FEZ1Q99689 392 aa15.47■□□□□ 0.07
SRP54-201ENST00000216774 NEDD4P46934 1319 aa15.47■□□□□ 0.07
SRP54-201ENST00000216774 CSF1RP07333 972 aa15.47■□□□□ 0.07
SRP54-201ENST00000216774 ARID5BQ14865 1188 aa15.47■□□□□ 0.07
SRP54-201ENST00000216774 SYNE3Q6ZMZ3 975 aa15.47■□□□□ 0.07
SRP54-201ENST00000216774 FILIP1Q7Z7B0 1213 aa15.47■□□□□ 0.07
SRP54-201ENST00000216774 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.47■□□□□ 0.072e-6■■■□□ 16
SRP54-201ENST00000216774 ZAP70P43403 619 aa15.46■□□□□ 0.07
SRP54-201ENST00000216774 IFIT5Q13325 482 aaKnown RBP15.46■□□□□ 0.07
SRP54-201ENST00000216774 PTPN14Q15678 1187 aa15.46■□□□□ 0.07
SRP54-201ENST00000216774 ATP2B3Q16720 1220 aa15.46■□□□□ 0.07
SRP54-201ENST00000216774 TOM1L2Q6ZVM7 507 aa15.46■□□□□ 0.07
SRP54-201ENST00000216774 PUS7LQ9H0K6 701 aaKnown RBP15.46■□□□□ 0.07
SRP54-201ENST00000216774 KIF2AO00139 706 aaPredicted RBP15.46■□□□□ 0.06
SRP54-201ENST00000216774 GPAA1O43292 621 aa15.46■□□□□ 0.06
SRP54-201ENST00000216774 POLR3DP05423 398 aaPredicted RBP15.46■□□□□ 0.06
SRP54-201ENST00000216774 CMA1P23946 247 aa15.46■□□□□ 0.06
SRP54-201ENST00000216774 KIF23Q02241 960 aaPredicted RBP15.46■□□□□ 0.06
SRP54-201ENST00000216774 SCARF1Q14162 830 aa15.46■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms