RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 PALLDQ8WX93 1383 aa15.83■□□□□ 0.12
SIX4-201ENST00000216513 NSMFQ6X4W1 530 aa15.83■□□□□ 0.12
SIX4-201ENST00000216513 SSFA2P28290 1259 aa15.82■□□□□ 0.12
SIX4-201ENST00000216513 CENPHQ9H3R5 247 aa15.82■□□□□ 0.12
SIX4-201ENST00000216513 SLC5A4Q9NY91 659 aa15.82■□□□□ 0.12
SIX4-201ENST00000216513 ORC3Q9UBD5 711 aaPredicted RBP15.82■□□□□ 0.12
SIX4-201ENST00000216513 MRE11P49959 708 aa15.82■□□□□ 0.12
SIX4-201ENST00000216513 PARP1P09874 1014 aaKnown RBP15.82■□□□□ 0.12
SIX4-201ENST00000216513 GOPCQ9HD26 462 aa15.82■□□□□ 0.12
SIX4-201ENST00000216513 SPATA31A6Q5VVP1 1343 aa15.82■□□□□ 0.12
SIX4-201ENST00000216513 KIF20AO95235 890 aa15.82■□□□□ 0.12
SIX4-201ENST00000216513 EIF5P55010 431 aaKnown RBP15.81■□□□□ 0.12
SIX4-201ENST00000216513 PPFIBP1Q86W92 1011 aa15.81■□□□□ 0.12
SIX4-201ENST00000216513 FERMT2Q96AC1 680 aa15.81■□□□□ 0.12
SIX4-201ENST00000216513 LPIN2Q92539 896 aa15.81■□□□□ 0.12
SIX4-201ENST00000216513 TAOK3Q9H2K8 898 aa15.81■□□□□ 0.12
SIX4-201ENST00000216513 TCERG1LQ5VWI1 586 aa15.81■□□□□ 0.12
SIX4-201ENST00000216513 CCDC148Q8NFR7 591 aa15.81■□□□□ 0.12
SIX4-201ENST00000216513 GYG1P46976 350 aa15.81■□□□□ 0.12
SIX4-201ENST00000216513 TXNRD1Q16881 649 aa15.81■□□□□ 0.12
SIX4-201ENST00000216513 HSP90AA4PQ58FG1 418 aa15.81■□□□□ 0.12
SIX4-201ENST00000216513 PRKAG2Q9UGJ0 569 aa15.81■□□□□ 0.12
SIX4-201ENST00000216513 MROH5Q6ZUA9 1318 aa15.81■□□□□ 0.12
SIX4-201ENST00000216513 VAMP4O75379 141 aa15.81■□□□□ 0.12
SIX4-201ENST00000216513 EIF4A1P60842 406 aaKnown RBP15.81■□□□□ 0.12
SIX4-201ENST00000216513 TMTC2Q8N394 836 aa15.81■□□□□ 0.12
SIX4-201ENST00000216513 TFIP11Q9UBB9 837 aaKnown RBP15.81■□□□□ 0.12
SIX4-201ENST00000216513 USP8P40818 1118 aa15.8■□□□□ 0.12
SIX4-201ENST00000216513 GCKRQ14397 625 aa15.8■□□□□ 0.12
SIX4-201ENST00000216513 KIFC2Q96AC6 838 aa15.8■□□□□ 0.12
SIX4-201ENST00000216513 UBA7P41226 1012 aa15.8■□□□□ 0.12
SIX4-201ENST00000216513 NMIQ13287 307 aaPredicted RBP15.8■□□□□ 0.12
SIX4-201ENST00000216513 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.8■□□□□ 0.12
SIX4-201ENST00000216513 A2ML1A8K2U0 1454 aa15.8■□□□□ 0.12
SIX4-201ENST00000216513 BIN1O00499 593 aa15.8■□□□□ 0.12
SIX4-201ENST00000216513 STXBP4Q6ZWJ1 553 aa15.8■□□□□ 0.12
SIX4-201ENST00000216513 GRPEL1Q9HAV7 217 aa15.8■□□□□ 0.12
SIX4-201ENST00000216513 ARHGEF12Q9NZN5 1544 aa15.8■□□□□ 0.12
SIX4-201ENST00000216513 PIGBQ92521 554 aa15.8■□□□□ 0.12
SIX4-201ENST00000216513 LPXNO60711 386 aa15.79■□□□□ 0.12
SIX4-201ENST00000216513 USP19O94966 1318 aa15.79■□□□□ 0.12
SIX4-201ENST00000216513 PABPC4Q13310 644 aaKnown RBP eCLIP15.79■□□□□ 0.12
SIX4-201ENST00000216513 USH1GQ495M9 461 aa15.79■□□□□ 0.12
SIX4-201ENST00000216513 MAP3K4Q9Y6R4 1608 aa15.79■□□□□ 0.12
SIX4-201ENST00000216513 ADGRL2O95490 1459 aa15.79■□□□□ 0.12
SIX4-201ENST00000216513 PRDM1O75626 825 aa15.79■□□□□ 0.12
SIX4-201ENST00000216513 ARHGAP45Q92619 1136 aa15.79■□□□□ 0.12
SIX4-201ENST00000216513 BRF1Q92994 677 aa15.79■□□□□ 0.12
SIX4-201ENST00000216513 NCAPG2Q86XI2 1143 aa15.79■□□□□ 0.12
SIX4-201ENST00000216513 MAP3K15Q6ZN16 1313 aa15.78■□□□□ 0.12
SIX4-201ENST00000216513 DPH6Q7L8W6 267 aa15.78■□□□□ 0.12
SIX4-201ENST00000216513 SUCLG2Q96I99 432 aa15.78■□□□□ 0.12
SIX4-201ENST00000216513 PHACTR2O75167 634 aa15.78■□□□□ 0.12
SIX4-201ENST00000216513 NBPF7P0C2Y1 421 aaPredicted RBP15.78■□□□□ 0.12
SIX4-201ENST00000216513 SPATA5Q8NB90 893 aa15.78■□□□□ 0.12
SIX4-201ENST00000216513 CIAPIN1Q6FI81 312 aa15.78■□□□□ 0.12
SIX4-201ENST00000216513 C2orf69Q8N8R5 385 aa15.78■□□□□ 0.12
SIX4-201ENST00000216513 LUC7LQ9NQ29 371 aaKnown RBP15.78■□□□□ 0.12
SIX4-201ENST00000216513 RXRAP19793 462 aa15.77■□□□□ 0.12
SIX4-201ENST00000216513 HMGN5P82970 282 aaKnown RBP15.77■□□□□ 0.12
SIX4-201ENST00000216513 AKNAD1Q5T1N1 836 aa15.77■□□□□ 0.12
SIX4-201ENST00000216513 CPLX3Q8WVH0 158 aa15.77■□□□□ 0.12
SIX4-201ENST00000216513 SLC1A4P43007 532 aa15.77■□□□□ 0.12
SIX4-201ENST00000216513 RTKN2Q8IZC4 609 aa15.77■□□□□ 0.12
SIX4-201ENST00000216513 PRDM10Q9NQV6 1147 aa15.77■□□□□ 0.12
SIX4-201ENST00000216513 TNNT1P13805 278 aa15.77■□□□□ 0.11
SIX4-201ENST00000216513 GPBP1L1Q9HC44 474 aaPredicted RBP15.77■□□□□ 0.11
SIX4-201ENST00000216513 PRC1O43663 620 aa15.77■□□□□ 0.11
SIX4-201ENST00000216513 ZNF354CQ86Y25 554 aa15.77■□□□□ 0.11
SIX4-201ENST00000216513 IL17REQ8NFR9 667 aa15.77■□□□□ 0.11
SIX4-201ENST00000216513 INSRP06213 1382 aa15.76■□□□□ 0.11
SIX4-201ENST00000216513 CHMP2AO43633 222 aa15.76■□□□□ 0.11
SIX4-201ENST00000216513 SUPT20HL1Q3ZLR7 823 aa15.76■□□□□ 0.11
SIX4-201ENST00000216513 TBC1D9Q6ZT07 1266 aa15.76■□□□□ 0.11
SIX4-201ENST00000216513 ERBB3P21860 1342 aa15.76■□□□□ 0.11
SIX4-201ENST00000216513 IL6STP40189 918 aaPredicted RBP15.76■□□□□ 0.11
SIX4-201ENST00000216513 TEX35Q5T0J7 233 aa15.76■□□□□ 0.11
SIX4-201ENST00000216513 DBNDD2Q9BQY9 259 aa15.76■□□□□ 0.11
SIX4-201ENST00000216513 HMG20BQ9P0W2 317 aa15.76■□□□□ 0.11
SIX4-201ENST00000216513 ARHGEF5Q12774 1597 aa15.76■□□□□ 0.11
SIX4-201ENST00000216513 KCNQ2O43526 872 aa15.76■□□□□ 0.11
SIX4-201ENST00000216513 SORBS3O60504 671 aa15.76■□□□□ 0.11
SIX4-201ENST00000216513 LETM1O95202 739 aaPredicted RBP15.76■□□□□ 0.11
SIX4-201ENST00000216513 TNNI3KQ59H18 835 aa15.76■□□□□ 0.11
SIX4-201ENST00000216513 NECAB1Q8N987 351 aa15.76■□□□□ 0.11
SIX4-201ENST00000216513 FPGT-TNNI3KV9GXZ4 949 aa15.76■□□□□ 0.11
SIX4-201ENST00000216513 NPR1P16066 1061 aa15.76■□□□□ 0.11
SIX4-201ENST00000216513 AMPD3Q01432 767 aa15.76■□□□□ 0.11
SIX4-201ENST00000216513 TAF3Q5VWG9 929 aa15.76■□□□□ 0.11
SIX4-201ENST00000216513 SLC10A4Q96EP9 437 aa15.76■□□□□ 0.11
SIX4-201ENST00000216513 RTL9Q8NET4 1388 aa15.75■□□□□ 0.11
SIX4-201ENST00000216513 GIGYF1O75420 1035 aaPredicted RBP15.75■□□□□ 0.11
SIX4-201ENST00000216513 SH2B1Q9NRF2 756 aaPredicted RBP15.75■□□□□ 0.11
SIX4-201ENST00000216513 BABAM1Q9NWV8 329 aa15.75■□□□□ 0.11
SIX4-201ENST00000216513 DDX39AO00148 427 aaKnown RBP15.75■□□□□ 0.11
SIX4-201ENST00000216513 RBM8AQ9Y5S9 174 aaKnown RBP15.75■□□□□ 0.11
SIX4-201ENST00000216513 M0QZ92 97 aa15.75■□□□□ 0.11
SIX4-201ENST00000216513 CHRNDQ07001 517 aa15.75■□□□□ 0.11
SIX4-201ENST00000216513 ZBTB38Q8NAP3 1195 aaPredicted RBP15.75■□□□□ 0.11
SIX4-201ENST00000216513 CSPG5O95196 566 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms