RNA–Protein interactions for RNA: ENST00000216099.12

APOBEC3D-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

APPRIS P1 TSL 2 BASIC

Gene APOBEC3D, Length 2,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-201ENST00000216099 PTH1RQ03431 593 aa12.64□□□□□ -0.39
APOBEC3D-201ENST00000216099 NECTIN1Q15223 517 aa12.64□□□□□ -0.39
APOBEC3D-201ENST00000216099 NME8Q8N427 588 aa12.64□□□□□ -0.39
APOBEC3D-201ENST00000216099 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.64□□□□□ -0.39
APOBEC3D-201ENST00000216099 DBNDD2Q9BQY9 259 aa12.64□□□□□ -0.39
APOBEC3D-201ENST00000216099 PRIM1P49642 420 aaKnown RBP12.64□□□□□ -0.39
APOBEC3D-201ENST00000216099 ZGPATQ8N5A5 531 aaKnown RBP12.64□□□□□ -0.39
APOBEC3D-201ENST00000216099 PNMA2Q9UL42 364 aa12.64□□□□□ -0.39
APOBEC3D-201ENST00000216099 AKAP11Q9UKA4 1901 aa12.64□□□□□ -0.39
APOBEC3D-201ENST00000216099 GOLGA6L22H0YM25 854 aa12.63□□□□□ -0.39
APOBEC3D-201ENST00000216099 ADAMTS2O95450 1211 aa12.63□□□□□ -0.39
APOBEC3D-201ENST00000216099 NLRP10Q86W26 655 aa12.63□□□□□ -0.39
APOBEC3D-201ENST00000216099 FAM227BQ96M60 508 aa12.63□□□□□ -0.39
APOBEC3D-201ENST00000216099 RPAP1Q9BWH6 1393 aaPredicted RBP12.63□□□□□ -0.39
APOBEC3D-201ENST00000216099 A0A0D9SFI3 127 aa12.63□□□□□ -0.39
APOBEC3D-201ENST00000216099 BAG4O95429 457 aaKnown RBP12.63□□□□□ -0.39
APOBEC3D-201ENST00000216099 ERCC5P28715 1186 aaPredicted RBP12.63□□□□□ -0.39
APOBEC3D-201ENST00000216099 CCDC144BQ3MJ40 725 aa12.63□□□□□ -0.39
APOBEC3D-201ENST00000216099 UPF3BQ9BZI7 483 aaKnown RBP12.63□□□□□ -0.39
APOBEC3D-201ENST00000216099 RBM8AQ9Y5S9 174 aaKnown RBP12.63□□□□□ -0.39
APOBEC3D-201ENST00000216099 ABCC12Q96J65 1359 aa12.63□□□□□ -0.39
APOBEC3D-201ENST00000216099 CCDC57Q2TAC2 916 aa12.62□□□□□ -0.39
APOBEC3D-201ENST00000216099 EGFLAMQ63HQ2 1017 aa12.62□□□□□ -0.39
APOBEC3D-201ENST00000216099 ZSWIM6Q9HCJ5 1215 aa12.62□□□□□ -0.39
APOBEC3D-201ENST00000216099 G3BP2Q9UN86 482 aaKnown RBP12.62□□□□□ -0.39
APOBEC3D-201ENST00000216099 ZBTB1Q9Y2K1 713 aa12.62□□□□□ -0.39
APOBEC3D-201ENST00000216099 VPS53Q5VIR6 699 aa12.62□□□□□ -0.39
APOBEC3D-201ENST00000216099 SH3TC1Q8TE82 1336 aa12.62□□□□□ -0.39
APOBEC3D-201ENST00000216099 HMG20BQ9P0W2 317 aa12.62□□□□□ -0.39
APOBEC3D-201ENST00000216099 TFIP11Q9UBB9 837 aaKnown RBP12.62□□□□□ -0.39
APOBEC3D-201ENST00000216099 THSD7AQ9UPZ6 1657 aa12.61□□□□□ -0.39
APOBEC3D-201ENST00000216099 RIC1Q4ADV7 1423 aa12.61□□□□□ -0.39
APOBEC3D-201ENST00000216099 ZKSCAN1P17029 563 aaPredicted RBP12.61□□□□□ -0.39
APOBEC3D-201ENST00000216099 TSGA10IPQ3SY00 556 aa12.61□□□□□ -0.39
APOBEC3D-201ENST00000216099 RNF20Q5VTR2 975 aa12.61□□□□□ -0.39
APOBEC3D-201ENST00000216099 USPL1Q5W0Q7 1092 aa12.61□□□□□ -0.39
APOBEC3D-201ENST00000216099 CREB3L3Q68CJ9 461 aa12.61□□□□□ -0.39
APOBEC3D-201ENST00000216099 MARCH10Q8NA82 808 aaPredicted RBP12.61□□□□□ -0.39
APOBEC3D-201ENST00000216099 KBTBD3Q8NAB2 608 aa12.61□□□□□ -0.39
APOBEC3D-201ENST00000216099 AKAP2Q9Y2D5 859 aa12.61□□□□□ -0.39
APOBEC3D-201ENST00000216099 NHSQ6T4R5 1651 aa12.61□□□□□ -0.39
APOBEC3D-201ENST00000216099 TCEAL1Q15170 157 aa12.61□□□□□ -0.39
APOBEC3D-201ENST00000216099 HLFQ16534 295 aa12.61□□□□□ -0.39
APOBEC3D-201ENST00000216099 LRRC24Q50LG9 513 aa12.61□□□□□ -0.39
APOBEC3D-201ENST00000216099 PRPF40BQ6NWY9 871 aaKnown RBP12.61□□□□□ -0.39
APOBEC3D-201ENST00000216099 ALDH8A1Q9H2A2 487 aaPredicted RBP12.61□□□□□ -0.39
APOBEC3D-201ENST00000216099 CEP126Q9P2H0 1117 aa12.61□□□□□ -0.39
APOBEC3D-201ENST00000216099 LIMCH1Q9UPQ0 1083 aa12.61□□□□□ -0.39
APOBEC3D-201ENST00000216099 SCN7AQ01118 1682 aa12.61□□□□□ -0.39
APOBEC3D-201ENST00000216099 A0A1B0GUL6 1792 aa12.6□□□□□ -0.39
APOBEC3D-201ENST00000216099 EIF5P55010 431 aaKnown RBP12.6□□□□□ -0.39
APOBEC3D-201ENST00000216099 SETQ01105 290 aaPredicted RBP12.6□□□□□ -0.39
APOBEC3D-201ENST00000216099 DZIP3Q86Y13 1208 aaKnown RBP12.6□□□□□ -0.39
APOBEC3D-201ENST00000216099 ZNF34Q8IZ26 560 aa12.6□□□□□ -0.39
APOBEC3D-201ENST00000216099 SYTL4Q96C24 671 aaPredicted RBP12.6□□□□□ -0.39
APOBEC3D-201ENST00000216099 CCDC87Q9NVE4 849 aa12.6□□□□□ -0.39
APOBEC3D-201ENST00000216099 ZDHHC9Q9Y397 364 aa12.6□□□□□ -0.39
APOBEC3D-201ENST00000216099 CYP46A1Q9Y6A2 500 aa12.6□□□□□ -0.39
APOBEC3D-201ENST00000216099 SLC27A2O14975 620 aa12.6□□□□□ -0.39
APOBEC3D-201ENST00000216099 CASTP20810 708 aaKnown RBP12.6□□□□□ -0.39
APOBEC3D-201ENST00000216099 PSMA5P28066 241 aa12.6□□□□□ -0.39
APOBEC3D-201ENST00000216099 AK2P54819 239 aa12.6□□□□□ -0.39
APOBEC3D-201ENST00000216099 IFIT5Q13325 482 aaKnown RBP12.6□□□□□ -0.39
APOBEC3D-201ENST00000216099 SMARCC1Q92922 1105 aaPredicted RBP12.6□□□□□ -0.39
APOBEC3D-201ENST00000216099 FAM89AQ96GI7 184 aa12.6□□□□□ -0.39
APOBEC3D-201ENST00000216099 ZNF594Q96JF6 807 aaPredicted RBP12.6□□□□□ -0.39
APOBEC3D-201ENST00000216099 ZSCAN31Q96LW9 406 aaPredicted RBP12.6□□□□□ -0.39
APOBEC3D-201ENST00000216099 FAN1Q9Y2M0 1017 aa12.6□□□□□ -0.39
APOBEC3D-201ENST00000216099 BTAF1O14981 1849 aa12.59□□□□□ -0.39
APOBEC3D-201ENST00000216099 DOCK2Q92608 1830 aa12.59□□□□□ -0.39
APOBEC3D-201ENST00000216099 A0A1B0GUL7 405 aa12.59□□□□□ -0.39
APOBEC3D-201ENST00000216099 CCDC194A0A1B0GVG4 234 aa12.59□□□□□ -0.39
APOBEC3D-201ENST00000216099 TAF5LO75529 589 aa12.59□□□□□ -0.39
APOBEC3D-201ENST00000216099 CTSWP56202 376 aa12.59□□□□□ -0.39
APOBEC3D-201ENST00000216099 L1TD1Q5T7N2 865 aaKnown RBP12.59□□□□□ -0.39
APOBEC3D-201ENST00000216099 INTS5Q6P9B9 1019 aaKnown RBP12.59□□□□□ -0.39
APOBEC3D-201ENST00000216099 RUFY3Q7L099 469 aa12.59□□□□□ -0.39
APOBEC3D-201ENST00000216099 JAKMIP1Q96N16 626 aaKnown RBP12.59□□□□□ -0.39
APOBEC3D-201ENST00000216099 TANGO6Q9C0B7 1094 aa12.59□□□□□ -0.39
APOBEC3D-201ENST00000216099 ISY1Q9ULR0 285 aaKnown RBP12.59□□□□□ -0.39
APOBEC3D-201ENST00000216099 TCHHQ07283 1943 aa12.59□□□□□ -0.39
APOBEC3D-201ENST00000216099 KCNJ4P48050 445 aa12.59□□□□□ -0.39
APOBEC3D-201ENST00000216099 EDC3Q96F86 508 aaKnown RBP12.59□□□□□ -0.39
APOBEC3D-201ENST00000216099 NEUROD6Q96NK8 337 aa12.59□□□□□ -0.39
APOBEC3D-201ENST00000216099 PUS3Q9BZE2 481 aaKnown RBP12.59□□□□□ -0.39
APOBEC3D-201ENST00000216099 SH2B1Q9NRF2 756 aaPredicted RBP12.59□□□□□ -0.39
APOBEC3D-201ENST00000216099 HELLSQ9NRZ9 838 aa12.59□□□□□ -0.39
APOBEC3D-201ENST00000216099 PAG1Q9NWQ8 432 aa12.59□□□□□ -0.39
APOBEC3D-201ENST00000216099 LIMD1Q9UGP4 676 aa12.59□□□□□ -0.39
APOBEC3D-201ENST00000216099 SSTR3P32745 418 aaPredicted RBP12.58□□□□□ -0.4
APOBEC3D-201ENST00000216099 MCMDC2Q4G0Z9 681 aa12.58□□□□□ -0.4
APOBEC3D-201ENST00000216099 TTLL11Q8NHH1 800 aa12.58□□□□□ -0.4
APOBEC3D-201ENST00000216099 SPOCK3Q9BQ16 436 aa12.58□□□□□ -0.4
APOBEC3D-201ENST00000216099 RRAGDQ9NQL2 400 aaPredicted RBP12.58□□□□□ -0.4
APOBEC3D-201ENST00000216099 PDRG1Q9NUG6 133 aa12.58□□□□□ -0.4
APOBEC3D-201ENST00000216099 FSD2A1L4K1 749 aa12.58□□□□□ -0.4
APOBEC3D-201ENST00000216099 NUTM2BA6NNL0 878 aaPredicted RBP12.58□□□□□ -0.4
APOBEC3D-201ENST00000216099 NUTM2EB1AL46 878 aaPredicted RBP12.58□□□□□ -0.4
APOBEC3D-201ENST00000216099 PDE8AO60658 829 aa12.58□□□□□ -0.4
APOBEC3D-201ENST00000216099 MARSP56192 900 aaKnown RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms