RNA–Protein interactions for RNA: ENST00000200181.7

ITGB4-201, Transcript of integrin subunit beta 4, humanhuman

TSL 1 (best) BASIC

Gene ITGB4, Length 5,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-201ENST00000200181 HS1BP3Q53T59 392 aa19.35■□□□□ 0.69
ITGB4-201ENST00000200181 PI4KAP2A4QPH2 592 aa19.35■□□□□ 0.69
ITGB4-201ENST00000200181 KRT2P35908 639 aa19.35■□□□□ 0.69
ITGB4-201ENST00000200181 PI4KAP1Q8N8J0 262 aa19.35■□□□□ 0.69
ITGB4-201ENST00000200181 CCT6BQ92526 530 aa19.35■□□□□ 0.69
ITGB4-201ENST00000200181 VPS52Q8N1B4 723 aa19.35■□□□□ 0.69
ITGB4-201ENST00000200181 GBP1P32455 592 aa19.35■□□□□ 0.69
ITGB4-201ENST00000200181 HS2ST1Q7LGA3 356 aa19.35■□□□□ 0.69
ITGB4-201ENST00000200181 GPR161Q8N6U8 529 aaKnown RBP19.35■□□□□ 0.69
ITGB4-201ENST00000200181 CLUL1Q15846 466 aa19.34■□□□□ 0.69
ITGB4-201ENST00000200181 CAMSAP2Q08AD1 1489 aa19.34■□□□□ 0.69
ITGB4-201ENST00000200181 CRCPO75575 148 aa19.34■□□□□ 0.69
ITGB4-201ENST00000200181 HPDP32754 393 aaPredicted RBP19.34■□□□□ 0.69
ITGB4-201ENST00000200181 CCDC122Q5T0U0 273 aa19.34■□□□□ 0.69
ITGB4-201ENST00000200181 CNGA4Q8IV77 575 aa19.34■□□□□ 0.69
ITGB4-201ENST00000200181 SWAP70Q9UH65 585 aa19.34■□□□□ 0.69
ITGB4-201ENST00000200181 FAM184BQ9ULE4 1060 aa19.34■□□□□ 0.69
ITGB4-201ENST00000200181 WAPLQ7Z5K2 1190 aa19.34■□□□□ 0.69
ITGB4-201ENST00000200181 MBIPQ9NS73 344 aa19.34■□□□□ 0.69
ITGB4-201ENST00000200181 EVCP57679 992 aa19.33■□□□□ 0.69
ITGB4-201ENST00000200181 PFDN4Q9NQP4 134 aa19.33■□□□□ 0.69
ITGB4-201ENST00000200181 RTL9Q8NET4 1388 aa19.33■□□□□ 0.69
ITGB4-201ENST00000200181 U2AF2P26368 475 aaKnown RBP eCLIP19.33■□□□□ 0.69
ITGB4-201ENST00000200181 HSPA1LP34931 641 aa19.33■□□□□ 0.68
ITGB4-201ENST00000200181 GAS8O95995 478 aa19.33■□□□□ 0.68
ITGB4-201ENST00000200181 HDAC1Q13547 482 aaPredicted RBP19.33■□□□□ 0.68
ITGB4-201ENST00000200181 ERCC6LQ2NKX8 1250 aa19.33■□□□□ 0.68
ITGB4-201ENST00000200181 BUB1BO60566 1050 aaPredicted RBP19.32■□□□□ 0.68
ITGB4-201ENST00000200181 GIGYF1O75420 1035 aaPredicted RBP19.32■□□□□ 0.68
ITGB4-201ENST00000200181 CALML3P27482 149 aa19.32■□□□□ 0.68
ITGB4-201ENST00000200181 RAPGEF1Q13905 1077 aa19.32■□□□□ 0.68
ITGB4-201ENST00000200181 CCDC152Q4G0S7 254 aa19.32■□□□□ 0.68
ITGB4-201ENST00000200181 JARID2Q92833 1246 aaPredicted RBP19.32■□□□□ 0.68
ITGB4-201ENST00000200181 SMARCA4P51532 1647 aa19.32■□□□□ 0.68
ITGB4-201ENST00000200181 CLNS1AP54105 237 aaKnown RBP19.32■□□□□ 0.68
ITGB4-201ENST00000200181 GEN1Q17RS7 908 aa19.32■□□□□ 0.68
ITGB4-201ENST00000200181 GKAP1Q5VSY0 366 aaPredicted RBP19.32■□□□□ 0.68
ITGB4-201ENST00000200181 NAIPQ13075 1403 aa19.32■□□□□ 0.68
ITGB4-201ENST00000200181 ARID4AP29374 1257 aaPredicted RBP19.32■□□□□ 0.68
ITGB4-201ENST00000200181 MCM7P33993 719 aa19.32■□□□□ 0.68
ITGB4-201ENST00000200181 CEP128Q6ZU80 1094 aa19.32■□□□□ 0.68
ITGB4-201ENST00000200181 EPSTI1Q96J88 318 aa19.32■□□□□ 0.68
ITGB4-201ENST00000200181 BAG1Q99933 345 aaPredicted RBP19.32■□□□□ 0.68
ITGB4-201ENST00000200181 AKR1B15C9JRZ8 316 aaPredicted RBP19.32■□□□□ 0.68
ITGB4-201ENST00000200181 SNX21Q969T3 373 aa19.32■□□□□ 0.68
ITGB4-201ENST00000200181 RFC1P35251 1148 aaPredicted RBP19.32■□□□□ 0.68
ITGB4-201ENST00000200181 SARNPP82979 210 aaKnown RBP19.32■□□□□ 0.68
ITGB4-201ENST00000200181 AKNAD1Q5T1N1 836 aa19.32■□□□□ 0.68
ITGB4-201ENST00000200181 ZGPATQ8N5A5 531 aaKnown RBP19.32■□□□□ 0.68
ITGB4-201ENST00000200181 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.32■□□□□ 0.68
ITGB4-201ENST00000200181 NCBP1Q09161 790 aaKnown RBP19.31■□□□□ 0.68
ITGB4-201ENST00000200181 FMNL3Q8IVF7 1028 aa19.31■□□□□ 0.68
ITGB4-201ENST00000200181 TTC36A6NLP5 189 aa19.31■□□□□ 0.68
ITGB4-201ENST00000200181 CSRNP2Q9H175 543 aa19.31■□□□□ 0.68
ITGB4-201ENST00000200181 PDE1AP54750 535 aa19.31■□□□□ 0.68
ITGB4-201ENST00000200181 LEO1Q8WVC0 666 aaPredicted RBP19.31■□□□□ 0.68
ITGB4-201ENST00000200181 RRP36Q96EU6 259 aaKnown RBP19.31■□□□□ 0.68
ITGB4-201ENST00000200181 PPP1R12CQ9BZL4 782 aa19.31■□□□□ 0.68
ITGB4-201ENST00000200181 POTEDQ86YR6 584 aa19.31■□□□□ 0.68
ITGB4-201ENST00000200181 SMAP1Q8IYB5 467 aaPredicted RBP19.31■□□□□ 0.68
ITGB4-201ENST00000200181 SPDYE3A6NKU9 549 aa19.3■□□□□ 0.68
ITGB4-201ENST00000200181 ERCC5P28715 1186 aaPredicted RBP19.3■□□□□ 0.68
ITGB4-201ENST00000200181 ERO1AQ96HE7 468 aa19.3■□□□□ 0.68
ITGB4-201ENST00000200181 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.3■□□□□ 0.68
ITGB4-201ENST00000200181 PPP1R21Q6ZMI0 780 aa19.3■□□□□ 0.68
ITGB4-201ENST00000200181 FAM114A2Q9NRY5 505 aa19.3■□□□□ 0.68
ITGB4-201ENST00000200181 TTC21BQ7Z4L5 1316 aa19.3■□□□□ 0.68
ITGB4-201ENST00000200181 NDUFAB1O14561 156 aa19.3■□□□□ 0.68
ITGB4-201ENST00000200181 RASA3Q14644 834 aa19.3■□□□□ 0.68
ITGB4-201ENST00000200181 DCAF17Q5H9S7 520 aaPredicted RBP19.3■□□□□ 0.68
ITGB4-201ENST00000200181 PLS1Q14651 629 aa19.29■□□□□ 0.68
ITGB4-201ENST00000200181 CCDC65Q8IXS2 484 aa19.29■□□□□ 0.68
ITGB4-201ENST00000200181 AQRO60306 1485 aaKnown RBP eCLIP19.29■□□□□ 0.68
ITGB4-201ENST00000200181 INPP5BP32019 993 aa19.29■□□□□ 0.68
ITGB4-201ENST00000200181 GBP7Q8N8V2 638 aaPredicted RBP19.29■□□□□ 0.68
ITGB4-201ENST00000200181 AGTPBP1Q9UPW5 1226 aa19.29■□□□□ 0.68
ITGB4-201ENST00000200181 TACC3Q9Y6A5 838 aa19.29■□□□□ 0.68
ITGB4-201ENST00000200181 TNNI2P48788 182 aa19.29■□□□□ 0.68
ITGB4-201ENST00000200181 TSNAXIP1Q2TAA8 658 aa19.29■□□□□ 0.68
ITGB4-201ENST00000200181 NUF2Q9BZD4 464 aa19.29■□□□□ 0.68
ITGB4-201ENST00000200181 ATP2B3Q16720 1220 aa19.29■□□□□ 0.68
ITGB4-201ENST00000200181 FAM204AQ9H8W3 233 aa19.29■□□□□ 0.68
ITGB4-201ENST00000200181 NAA16Q6N069 864 aaPredicted RBP19.28■□□□□ 0.68
ITGB4-201ENST00000200181 IFNL2Q8IZJ0 200 aa19.28■□□□□ 0.68
ITGB4-201ENST00000200181 NAPGQ99747 312 aaPredicted RBP19.28■□□□□ 0.68
ITGB4-201ENST00000200181 CCDC141Q6ZP82 1450 aa19.28■□□□□ 0.68
ITGB4-201ENST00000200181 SBNO2Q9Y2G9 1366 aa19.28■□□□□ 0.68
ITGB4-201ENST00000200181 NMIQ13287 307 aaPredicted RBP19.28■□□□□ 0.68
ITGB4-201ENST00000200181 C8orf74Q6P047 294 aa19.28■□□□□ 0.68
ITGB4-201ENST00000200181 E7EVH7 732 aa19.28■□□□□ 0.68
ITGB4-201ENST00000200181 ST5P78524 1137 aa19.28■□□□□ 0.68
ITGB4-201ENST00000200181 BRAPQ7Z569 592 aa19.28■□□□□ 0.68
ITGB4-201ENST00000200181 SDCCAG8Q86SQ7 713 aaPredicted RBP19.28■□□□□ 0.68
ITGB4-201ENST00000200181 ZNF622Q969S3 477 aaKnown RBP eCLIP19.28■□□□□ 0.68
ITGB4-201ENST00000200181 ZNF131P52739 623 aa19.28■□□□□ 0.68
ITGB4-201ENST00000200181 PICALMQ13492 652 aa19.28■□□□□ 0.68
ITGB4-201ENST00000200181 DTHD1Q6ZMT9 781 aa19.28■□□□□ 0.68
ITGB4-201ENST00000200181 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.28■□□□□ 0.68
ITGB4-201ENST00000200181 IL16Q14005 1332 aa19.28■□□□□ 0.68
ITGB4-201ENST00000200181 EXOC5O00471 708 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 108.6 ms