RNA–Protein interactions for RNA: ENST00000191018.9

CTSA-201, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-201ENST00000191018 CCDC24Q8N4L8 307 aa22.13■■□□□ 1.13
CTSA-201ENST00000191018 TCEANC2Q96MN5 208 aa22.13■■□□□ 1.13
CTSA-201ENST00000191018 ZNF532Q9HCE3 1301 aa22.12■■□□□ 1.13
CTSA-201ENST00000191018 TRAK2O60296 914 aa22.12■■□□□ 1.13
CTSA-201ENST00000191018 GYS1P13807 737 aa22.12■■□□□ 1.13
CTSA-201ENST00000191018 CTNNA3Q9UI47 895 aa22.12■■□□□ 1.13
CTSA-201ENST00000191018 WWC3Q9ULE0 1092 aa22.12■■□□□ 1.13
CTSA-201ENST00000191018 A0A0G2JLW4 131 aa22.11■■□□□ 1.13
CTSA-201ENST00000191018 HMGB2P26583 209 aaKnown RBP22.11■■□□□ 1.13
CTSA-201ENST00000191018 TXNRD1Q16881 649 aa22.11■■□□□ 1.13
CTSA-201ENST00000191018 TTLL5Q6EMB2 1281 aa22.11■■□□□ 1.13
CTSA-201ENST00000191018 CCDC83Q8IWF9 413 aa22.11■■□□□ 1.13
CTSA-201ENST00000191018 E7EWF7 191 aa22.1■■□□□ 1.13
CTSA-201ENST00000191018 FGAP02671 866 aa22.1■■□□□ 1.13
CTSA-201ENST00000191018 CNBD1Q8NA66 436 aa22.1■■□□□ 1.13
CTSA-201ENST00000191018 WTIPA6NIX2 430 aaPredicted RBP22.09■■□□□ 1.13
CTSA-201ENST00000191018 MAP3K12Q12852 859 aa22.09■■□□□ 1.13
CTSA-201ENST00000191018 DHX32Q7L7V1 743 aaKnown RBP22.09■■□□□ 1.13
CTSA-201ENST00000191018 SMC3Q9UQE7 1217 aa22.09■■□□□ 1.13
CTSA-201ENST00000191018 GOLGA6L22H0YM25 854 aa22.09■■□□□ 1.13
CTSA-201ENST00000191018 ANKRD2Q9GZV1 360 aa22.09■■□□□ 1.13
CTSA-201ENST00000191018 EXOSC10Q01780 885 aaKnown RBP22.08■■□□□ 1.13
CTSA-201ENST00000191018 PRR5LQ6MZQ0 368 aa22.08■■□□□ 1.13
CTSA-201ENST00000191018 AGXT2Q9BYV1 514 aa22.08■■□□□ 1.13
CTSA-201ENST00000191018 MYH13Q9UKX3 1938 aa22.07■■□□□ 1.12
CTSA-201ENST00000191018 PLSCR1O15162 318 aa22.07■■□□□ 1.12
CTSA-201ENST00000191018 NPHP1O15259 732 aa22.07■■□□□ 1.12
CTSA-201ENST00000191018 GYG1P46976 350 aa22.07■■□□□ 1.12
CTSA-201ENST00000191018 IMMTQ16891 758 aaKnown RBP22.07■■□□□ 1.12
CTSA-201ENST00000191018 Q6ZUG5 572 aa22.07■■□□□ 1.12
CTSA-201ENST00000191018 NECAB1Q8N987 351 aa22.07■■□□□ 1.12
CTSA-201ENST00000191018 COL1A1P02452 1464 aaPredicted RBP22.07■■□□□ 1.12
CTSA-201ENST00000191018 WDR33Q9C0J8 1336 aaKnown RBP22.07■■□□□ 1.12
CTSA-201ENST00000191018 CAVIN4Q5BKX8 364 aa22.07■■□□□ 1.12
CTSA-201ENST00000191018 MAGEB6Q8N7X4 407 aa22.07■■□□□ 1.12
CTSA-201ENST00000191018 FAM84BQ96KN1 310 aaPredicted RBP22.07■■□□□ 1.12
CTSA-201ENST00000191018 GNL3LQ9NVN8 582 aaKnown RBP22.07■■□□□ 1.12
CTSA-201ENST00000191018 SKOR2Q2VWA4 1001 aaPredicted RBP22.06■■□□□ 1.12
CTSA-201ENST00000191018 FBXO33Q7Z6M2 555 aa22.06■■□□□ 1.12
CTSA-201ENST00000191018 STRBPQ96SI9 672 aaKnown RBP22.06■■□□□ 1.12
CTSA-201ENST00000191018 GJB2P29033 226 aa22.05■■□□□ 1.12
CTSA-201ENST00000191018 MCTP1Q6DN14 999 aa22.05■■□□□ 1.12
CTSA-201ENST00000191018 SYT1P21579 422 aa22.05■■□□□ 1.12
CTSA-201ENST00000191018 GRAPQ13588 217 aa22.05■■□□□ 1.12
CTSA-201ENST00000191018 FBXL16Q8N461 479 aa22.05■■□□□ 1.12
CTSA-201ENST00000191018 GRAPLQ8TC17 118 aaPredicted RBP22.05■■□□□ 1.12
CTSA-201ENST00000191018 ZBTB22O15209 634 aa22.04■■□□□ 1.12
CTSA-201ENST00000191018 SERPINB2P05120 415 aa22.04■■□□□ 1.12
CTSA-201ENST00000191018 CRY2Q49AN0 593 aa22.04■■□□□ 1.12
CTSA-201ENST00000191018 AIDAQ96BJ3 306 aa22.04■■□□□ 1.12
CTSA-201ENST00000191018 ZMYM6O95789 1325 aa22.04■■□□□ 1.12
CTSA-201ENST00000191018 CACNA1SQ13698 1873 aa22.04■■□□□ 1.12
CTSA-201ENST00000191018 SEMA3EO15041 775 aa22.03■■□□□ 1.12
CTSA-201ENST00000191018 ALX1Q15699 326 aa22.03■■□□□ 1.12
CTSA-201ENST00000191018 DENND2AQ9ULE3 1009 aa22.03■■□□□ 1.12
CTSA-201ENST00000191018 IQSEC3Q9UPP2 1182 aaPredicted RBP22.03■■□□□ 1.12
CTSA-201ENST00000191018 IRS2Q9Y4H2 1338 aa22.03■■□□□ 1.12
CTSA-201ENST00000191018 ZNF213O14771 459 aa22.03■■□□□ 1.12
CTSA-201ENST00000191018 STX6O43752 255 aa22.03■■□□□ 1.12
CTSA-201ENST00000191018 HAND2P61296 217 aa22.03■■□□□ 1.12
CTSA-201ENST00000191018 FOXD4L5Q5VV16 416 aaPredicted RBP22.03■■□□□ 1.12
CTSA-201ENST00000191018 FOXD4L4Q8WXT5 416 aaPredicted RBP22.03■■□□□ 1.12
CTSA-201ENST00000191018 BRF1Q92994 677 aa22.03■■□□□ 1.12
CTSA-201ENST00000191018 GTF3C6Q969F1 213 aa22.03■■□□□ 1.12
CTSA-201ENST00000191018 LMBRD1Q9NUN5 540 aa22.03■■□□□ 1.12
CTSA-201ENST00000191018 PDS5AQ29RF7 1337 aaKnown RBP22.03■■□□□ 1.12
CTSA-201ENST00000191018 TNS1Q9HBL0 1735 aaKnown RBP22.02■■□□□ 1.12
CTSA-201ENST00000191018 PNPLA7Q6ZV29 1317 aa22.02■■□□□ 1.12
CTSA-201ENST00000191018 KLRK1P26718 216 aa22.02■■□□□ 1.12
CTSA-201ENST00000191018 LRRC2Q9BYS8 371 aa22.02■■□□□ 1.12
CTSA-201ENST00000191018 LRP2BPQ9P2M1 347 aa22.02■■□□□ 1.12
CTSA-201ENST00000191018 PATL2C9JE40 543 aaKnown RBP22.01■■□□□ 1.11
CTSA-201ENST00000191018 ZSCAN22P10073 491 aaPredicted RBP22.01■■□□□ 1.11
CTSA-201ENST00000191018 VPS37DQ86XT2 251 aa22.01■■□□□ 1.11
CTSA-201ENST00000191018 AKT1S1Q96B36 256 aa22.01■■□□□ 1.11
CTSA-201ENST00000191018 NBPF3Q9H094 633 aa22.01■■□□□ 1.11
CTSA-201ENST00000191018 RGPD3A6NKT7 1758 aaPredicted RBP22.01■■□□□ 1.11
CTSA-201ENST00000191018 RGPD4Q7Z3J3 1758 aa22.01■■□□□ 1.11
CTSA-201ENST00000191018 POLRMTO00411 1230 aaKnown RBP22■■□□□ 1.11
CTSA-201ENST00000191018 MBD4O95243 580 aa22■■□□□ 1.11
CTSA-201ENST00000191018 RXRBP28702 533 aa22■■□□□ 1.11
CTSA-201ENST00000191018 ST5P78524 1137 aa22■■□□□ 1.11
CTSA-201ENST00000191018 DDR1Q08345 913 aa22■■□□□ 1.11
CTSA-201ENST00000191018 MB21D2Q8IYB1 491 aaPredicted RBP22■■□□□ 1.11
CTSA-201ENST00000191018 CHD4Q14839 1912 aa22■■□□□ 1.11
CTSA-201ENST00000191018 NRXN2Q9P2S2 1712 aa22■■□□□ 1.11
CTSA-201ENST00000191018 PDIA4P13667 645 aaKnown RBP22■■□□□ 1.11
CTSA-201ENST00000191018 ZNF827Q17R98 1081 aa22■■□□□ 1.11
CTSA-201ENST00000191018 APBA3O96018 575 aa21.99■■□□□ 1.11
CTSA-201ENST00000191018 HIBADHP31937 336 aaKnown RBP21.99■■□□□ 1.11
CTSA-201ENST00000191018 EVCP57679 992 aa21.99■■□□□ 1.11
CTSA-201ENST00000191018 CHAMP1Q96JM3 812 aa21.99■■□□□ 1.11
CTSA-201ENST00000191018 EPB41L4AQ9HCS5 686 aaPredicted RBP21.99■■□□□ 1.11
CTSA-201ENST00000191018 TCHHQ07283 1943 aa21.99■■□□□ 1.11
CTSA-201ENST00000191018 WDR19Q8NEZ3 1342 aa21.99■■□□□ 1.11
CTSA-201ENST00000191018 PFKFB2O60825 505 aa21.98■■□□□ 1.11
CTSA-201ENST00000191018 GNAT2P19087 354 aa21.98■■□□□ 1.11
CTSA-201ENST00000191018 FGD1P98174 961 aa21.98■■□□□ 1.11
CTSA-201ENST00000191018 STK3Q13188 491 aa21.98■■□□□ 1.11
CTSA-201ENST00000191018 KLHL40Q2TBA0 621 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms