RNA–Protein interactions for RNA: ENST00000183605.9

CLDN18-201, Transcript of claudin 18, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLDN18, Length 3,520 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18-201ENST00000183605 CTAGE6Q86UF2 777 aa11.55□□□□□ -0.56
CLDN18-201ENST00000183605 CTAGE4Q8IX94 777 aa11.55□□□□□ -0.56
CLDN18-201ENST00000183605 YY1AP1Q9H869 796 aa11.55□□□□□ -0.56
CLDN18-201ENST00000183605 RAI14Q9P0K7 980 aa11.55□□□□□ -0.56
CLDN18-201ENST00000183605 TAF6LQ9Y6J9 622 aa11.55□□□□□ -0.56
CLDN18-201ENST00000183605 U3KPZ7 1027 aaPredicted RBP11.55□□□□□ -0.56
CLDN18-201ENST00000183605 H3BQF6 201 aa11.55□□□□□ -0.56
CLDN18-201ENST00000183605 PSME1Q06323 249 aa11.55□□□□□ -0.56
CLDN18-201ENST00000183605 GIMAP7Q8NHV1 300 aa11.55□□□□□ -0.56
CLDN18-201ENST00000183605 FUT8Q9BYC5 575 aa11.55□□□□□ -0.56
CLDN18-201ENST00000183605 ERBB3P21860 1342 aa11.55□□□□□ -0.56
CLDN18-201ENST00000183605 SLIT1O75093 1534 aa11.55□□□□□ -0.56
CLDN18-201ENST00000183605 KIAA0754O94854 1291 aa11.55□□□□□ -0.56
CLDN18-201ENST00000183605 NAA16Q6N069 864 aaPredicted RBP11.55□□□□□ -0.56
CLDN18-201ENST00000183605 CAGE1Q8TC20 777 aa11.55□□□□□ -0.56
CLDN18-201ENST00000183605 SEC62Q99442 399 aaKnown RBP11.55□□□□□ -0.56
CLDN18-201ENST00000183605 CENPHQ9H3R5 247 aa11.55□□□□□ -0.56
CLDN18-201ENST00000183605 EBAG9O00559 213 aa11.54□□□□□ -0.56
CLDN18-201ENST00000183605 ERLIN2O94905 339 aa11.54□□□□□ -0.56
CLDN18-201ENST00000183605 SCRN1Q12765 414 aa11.54□□□□□ -0.56
CLDN18-201ENST00000183605 ADALQ6DHV7 355 aa11.54□□□□□ -0.56
CLDN18-201ENST00000183605 JMYQ8N9B5 988 aa11.54□□□□□ -0.56
CLDN18-201ENST00000183605 NEUROD6Q96NK8 337 aa11.54□□□□□ -0.56
CLDN18-201ENST00000183605 FAM204AQ9H8W3 233 aa11.54□□□□□ -0.56
CLDN18-201ENST00000183605 SHTN1A0MZ66 631 aa11.54□□□□□ -0.56
CLDN18-201ENST00000183605 ATP2B1P20020 1258 aa11.54□□□□□ -0.56
CLDN18-201ENST00000183605 FOXR1Q6PIV2 292 aa11.54□□□□□ -0.56
CLDN18-201ENST00000183605 PACS2Q86VP3 889 aa11.54□□□□□ -0.56
CLDN18-201ENST00000183605 NGDNQ8NEJ9 315 aaKnown RBP11.54□□□□□ -0.56
CLDN18-201ENST00000183605 AFAP1L1Q8TED9 768 aa11.54□□□□□ -0.56
CLDN18-201ENST00000183605 IL17RAQ96F46 866 aa11.54□□□□□ -0.56
CLDN18-201ENST00000183605 GDAP1L1Q96MZ0 367 aa11.54□□□□□ -0.56
CLDN18-201ENST00000183605 CHPF2Q9P2E5 772 aa11.54□□□□□ -0.56
CLDN18-201ENST00000183605 NDUFB9Q9Y6M9 179 aa11.54□□□□□ -0.56
CLDN18-201ENST00000183605 GIGYF1O75420 1035 aaPredicted RBP11.53□□□□□ -0.56
CLDN18-201ENST00000183605 COL9A3Q14050 684 aaPredicted RBP11.53□□□□□ -0.56
CLDN18-201ENST00000183605 CT47A1Q5JQC4 288 aaPredicted RBP11.53□□□□□ -0.56
CLDN18-201ENST00000183605 CTAGE9A4FU28 777 aa11.53□□□□□ -0.56
CLDN18-201ENST00000183605 CLGNO14967 610 aa11.53□□□□□ -0.56
CLDN18-201ENST00000183605 N4BP1O75113 896 aaKnown RBP11.53□□□□□ -0.56
CLDN18-201ENST00000183605 KLHL10Q6JEL2 608 aa11.53□□□□□ -0.56
CLDN18-201ENST00000183605 ZNF589Q86UQ0 364 aaPredicted RBP11.53□□□□□ -0.56
CLDN18-201ENST00000183605 RUFY1Q96T51 708 aa11.53□□□□□ -0.56
CLDN18-201ENST00000183605 ABCB6Q9NP58 842 aa11.53□□□□□ -0.56
CLDN18-201ENST00000183605 FANCLQ9NW38 375 aa11.53□□□□□ -0.56
CLDN18-201ENST00000183605 ATL3Q6DD88 541 aa11.53□□□□□ -0.56
CLDN18-201ENST00000183605 SETBP1Q9Y6X0 1596 aa11.52□□□□□ -0.56
CLDN18-201ENST00000183605 MAP3K5Q99683 1374 aa11.52□□□□□ -0.56
CLDN18-201ENST00000183605 TMEM232C9JQI7 657 aa11.52□□□□□ -0.56
CLDN18-201ENST00000183605 TRIM29Q14134 588 aa11.52□□□□□ -0.56
CLDN18-201ENST00000183605 CCDC70Q6NSX1 233 aa11.52□□□□□ -0.56
CLDN18-201ENST00000183605 SRGAP1Q7Z6B7 1085 aa11.52□□□□□ -0.56
CLDN18-201ENST00000183605 REXO1L1PQ8IX06 675 aa11.52□□□□□ -0.56
CLDN18-201ENST00000183605 CCDC148Q8NFR7 591 aa11.52□□□□□ -0.56
CLDN18-201ENST00000183605 SUGCTQ9HAC7 445 aa11.52□□□□□ -0.56
CLDN18-201ENST00000183605 PSD3Q9NYI0 1048 aa11.52□□□□□ -0.56
CLDN18-201ENST00000183605 KNDC1Q76NI1 1749 aa11.52□□□□□ -0.56
CLDN18-201ENST00000183605 EFCAB6Q5THR3 1501 aa11.52□□□□□ -0.57
CLDN18-201ENST00000183605 HMGB1P09429 215 aaKnown RBP11.52□□□□□ -0.57
CLDN18-201ENST00000183605 HSP90AB3PQ58FF7 597 aa11.52□□□□□ -0.57
CLDN18-201ENST00000183605 DDX46Q7L014 1031 aaKnown RBP11.52□□□□□ -0.57
CLDN18-201ENST00000183605 DPF2Q92785 391 aa11.52□□□□□ -0.57
CLDN18-201ENST00000183605 IRX2Q9BZI1 471 aaPredicted RBP11.52□□□□□ -0.57
CLDN18-201ENST00000183605 ARHGAP23Q9P227 1491 aa11.52□□□□□ -0.57
CLDN18-201ENST00000183605 MAP3K19Q56UN5 1328 aa11.52□□□□□ -0.57
CLDN18-201ENST00000183605 ATP6V1AP38606 617 aa11.52□□□□□ -0.57
CLDN18-201ENST00000183605 TDO2P48775 406 aa11.52□□□□□ -0.57
CLDN18-201ENST00000183605 MCTP2Q6DN12 878 aa11.52□□□□□ -0.57
CLDN18-201ENST00000183605 MMS22LQ6ZRQ5 1243 aa11.52□□□□□ -0.57
CLDN18-201ENST00000183605 DHX32Q7L7V1 743 aaKnown RBP11.52□□□□□ -0.57
CLDN18-201ENST00000183605 EFCAB13Q8IY85 973 aa11.52□□□□□ -0.57
CLDN18-201ENST00000183605 EAF2Q96CJ1 260 aaPredicted RBP11.52□□□□□ -0.57
CLDN18-201ENST00000183605 CLIC4Q9Y696 253 aa11.52□□□□□ -0.57
CLDN18-201ENST00000183605 MAP3K9P80192 1104 aa11.51□□□□□ -0.57
CLDN18-201ENST00000183605 POLA2Q14181 598 aa11.51□□□□□ -0.57
CLDN18-201ENST00000183605 MAP9Q49MG5 647 aa11.51□□□□□ -0.57
CLDN18-201ENST00000183605 TRIM65Q6PJ69 517 aa11.51□□□□□ -0.57
CLDN18-201ENST00000183605 RALYLQ86SE5 291 aaKnown RBP11.51□□□□□ -0.57
CLDN18-201ENST00000183605 FMR1NBQ8N0W7 255 aaPredicted RBP11.51□□□□□ -0.57
CLDN18-201ENST00000183605 FAM71BQ8TC56 605 aa11.51□□□□□ -0.57
CLDN18-201ENST00000183605 LLPHQ9BRT6 129 aaKnown RBP11.51□□□□□ -0.57
CLDN18-201ENST00000183605 MAP3K2Q9Y2U5 619 aa11.51□□□□□ -0.57
CLDN18-201ENST00000183605 MRFAP1Q9Y605 127 aa11.51□□□□□ -0.57
CLDN18-201ENST00000183605 KCNJ6P48051 423 aa11.51□□□□□ -0.57
CLDN18-201ENST00000183605 CASP8Q14790 479 aa11.51□□□□□ -0.57
CLDN18-201ENST00000183605 CWF19L2Q2TBE0 894 aaKnown RBP11.51□□□□□ -0.57
CLDN18-201ENST00000183605 FILIP1LQ4L180 1135 aa11.51□□□□□ -0.57
CLDN18-201ENST00000183605 CCDC102BQ68D86 513 aa11.51□□□□□ -0.57
CLDN18-201ENST00000183605 CPLX2Q6PUV4 134 aaKnown RBP11.51□□□□□ -0.57
CLDN18-201ENST00000183605 TOGARAM2Q6ZUX3 1019 aa11.51□□□□□ -0.57
CLDN18-201ENST00000183605 NSUN7Q8NE18 718 aaKnown RBP11.51□□□□□ -0.57
CLDN18-201ENST00000183605 USP32Q8NFA0 1604 aa11.51□□□□□ -0.57
CLDN18-201ENST00000183605 A2ML1A8K2U0 1454 aa11.51□□□□□ -0.57
CLDN18-201ENST00000183605 VWA3AA6NCI4 1184 aa11.51□□□□□ -0.57
CLDN18-201ENST00000183605 PFKFB1P16118 471 aa11.51□□□□□ -0.57
CLDN18-201ENST00000183605 CCT5P48643 541 aa11.51□□□□□ -0.57
CLDN18-201ENST00000183605 EIF5P55010 431 aaKnown RBP11.51□□□□□ -0.57
CLDN18-201ENST00000183605 PNOCQ13519 176 aa11.51□□□□□ -0.57
CLDN18-201ENST00000183605 TSR1Q2NL82 804 aaKnown RBP11.51□□□□□ -0.57
CLDN18-201ENST00000183605 RIC3Q7Z5B4 369 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms