RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 NKX2-3Q8TAU0 364 aa15.42■□□□□ 0.06
CTNS-201ENST00000046640 SCAND2PQ9GZW5 306 aaPredicted RBP15.42■□□□□ 0.06
CTNS-201ENST00000046640 SHANK3Q9BYB0 1731 aa15.42■□□□□ 0.06
CTNS-201ENST00000046640 ZNF710Q8N1W2 664 aa15.42■□□□□ 0.06
CTNS-201ENST00000046640 TNMDQ9H2S6 317 aa15.42■□□□□ 0.06
CTNS-201ENST00000046640 INCENPQ9NQS7 918 aa15.42■□□□□ 0.06
CTNS-201ENST00000046640 KCNQ4P56696 695 aa15.41■□□□□ 0.06
CTNS-201ENST00000046640 IMMTQ16891 758 aaKnown RBP15.41■□□□□ 0.06
CTNS-201ENST00000046640 PIH1D3Q9NQM4 214 aaKnown RBP15.41■□□□□ 0.06
CTNS-201ENST00000046640 SEC31BQ9NQW1 1179 aa15.41■□□□□ 0.06
CTNS-201ENST00000046640 NRBP1Q9UHY1 535 aa15.41■□□□□ 0.06
CTNS-201ENST00000046640 RXRAP19793 462 aa15.41■□□□□ 0.06
CTNS-201ENST00000046640 LRMPQ12912 555 aa15.41■□□□□ 0.06
CTNS-201ENST00000046640 A0A087WWV3 80 aa15.4■□□□□ 0.06
CTNS-201ENST00000046640 MAP3K11Q16584 847 aa15.4■□□□□ 0.06
CTNS-201ENST00000046640 ANO6Q4KMQ2 910 aa15.4■□□□□ 0.06
CTNS-201ENST00000046640 SMIM5Q71RC9 77 aa15.4■□□□□ 0.06
CTNS-201ENST00000046640 FBXW7Q969H0 707 aa15.4■□□□□ 0.06
CTNS-201ENST00000046640 SPDYE4A6NLX3 237 aa15.4■□□□□ 0.06
CTNS-201ENST00000046640 PRC1O43663 620 aa15.4■□□□□ 0.06
CTNS-201ENST00000046640 ATP6V1AP38606 617 aa15.4■□□□□ 0.06
CTNS-201ENST00000046640 TYRO3Q06418 890 aa15.4■□□□□ 0.06
CTNS-201ENST00000046640 APPBP2Q92624 585 aa15.4■□□□□ 0.06
CTNS-201ENST00000046640 PLA2G12BQ9BX93 195 aa15.4■□□□□ 0.06
CTNS-201ENST00000046640 KIF3AQ9Y496 699 aa15.4■□□□□ 0.06
CTNS-201ENST00000046640 BCL9O00512 1426 aa15.4■□□□□ 0.06
CTNS-201ENST00000046640 KLF18A0A0U1RQI7 1052 aa15.39■□□□□ 0.05
CTNS-201ENST00000046640 ZNF213O14771 459 aa15.39■□□□□ 0.05
CTNS-201ENST00000046640 SUSD4Q5VX71 490 aa15.39■□□□□ 0.05
CTNS-201ENST00000046640 CCDC102BQ68D86 513 aa15.39■□□□□ 0.05
CTNS-201ENST00000046640 SMARCC2Q8TAQ2 1214 aa15.39■□□□□ 0.05
CTNS-201ENST00000046640 ERCC4Q92889 916 aaPredicted RBP15.39■□□□□ 0.05
CTNS-201ENST00000046640 PDE8BO95263 885 aa15.39■□□□□ 0.05
CTNS-201ENST00000046640 CCDC186Q7Z3E2 898 aa15.39■□□□□ 0.05
CTNS-201ENST00000046640 CCDC144CPQ8IYA2 1237 aa15.39■□□□□ 0.05
CTNS-201ENST00000046640 WWC3Q9ULE0 1092 aa15.39■□□□□ 0.05
CTNS-201ENST00000046640 IQSEC3Q9UPP2 1182 aaPredicted RBP15.39■□□□□ 0.05
CTNS-201ENST00000046640 MRVI1Q9Y6F6 885 aa15.39■□□□□ 0.05
CTNS-201ENST00000046640 RIC1Q4ADV7 1423 aa15.39■□□□□ 0.05
CTNS-201ENST00000046640 RIOK3O14730 519 aaKnown RBP15.38■□□□□ 0.05
CTNS-201ENST00000046640 POLR3DP05423 398 aaPredicted RBP15.38■□□□□ 0.05
CTNS-201ENST00000046640 TRIM5Q9C035 493 aa15.38■□□□□ 0.05
CTNS-201ENST00000046640 GOLGA8BA8MQT2 603 aa15.38■□□□□ 0.05
CTNS-201ENST00000046640 PDE8AO60658 829 aa15.38■□□□□ 0.05
CTNS-201ENST00000046640 PPP4R3BQ5MIZ7 849 aa15.38■□□□□ 0.05
CTNS-201ENST00000046640 RALYLQ86SE5 291 aaKnown RBP15.38■□□□□ 0.05
CTNS-201ENST00000046640 USP28Q96RU2 1077 aa15.38■□□□□ 0.05
CTNS-201ENST00000046640 BCL2L12Q9HB09 334 aa15.38■□□□□ 0.05
CTNS-201ENST00000046640 CTNNA3Q9UI47 895 aa15.38■□□□□ 0.05
CTNS-201ENST00000046640 ELP1O95163 1332 aa15.38■□□□□ 0.05
CTNS-201ENST00000046640 ZNF532Q9HCE3 1301 aa15.38■□□□□ 0.05
CTNS-201ENST00000046640 FDPSP14324 419 aaKnown RBP15.38■□□□□ 0.05
CTNS-201ENST00000046640 KIAA1524Q8TCG1 905 aa15.38■□□□□ 0.05
CTNS-201ENST00000046640 PRIMPOLQ96LW4 560 aa15.38■□□□□ 0.05
CTNS-201ENST00000046640 ZHX1Q9UKY1 873 aaPredicted RBP15.38■□□□□ 0.05
CTNS-201ENST00000046640 ABCA3Q99758 1704 aa15.37■□□□□ 0.05
CTNS-201ENST00000046640 ZFYP08048 801 aaPredicted RBP15.37■□□□□ 0.05
CTNS-201ENST00000046640 LRRFIP1Q32MZ4 808 aaKnown RBP15.37■□□□□ 0.05
CTNS-201ENST00000046640 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.37■□□□□ 0.05
CTNS-201ENST00000046640 C16orf45Q96MC5 204 aaPredicted RBP15.37■□□□□ 0.05
CTNS-201ENST00000046640 DNAJC25Q9H1X3 360 aa15.37■□□□□ 0.05
CTNS-201ENST00000046640 CBX8Q9HC52 389 aa15.37■□□□□ 0.05
CTNS-201ENST00000046640 PAPPAQ13219 1627 aa15.37■□□□□ 0.05
CTNS-201ENST00000046640 ANTXR2P58335 489 aa15.37■□□□□ 0.05
CTNS-201ENST00000046640 HMGN5P82970 282 aaKnown RBP15.37■□□□□ 0.05
CTNS-201ENST00000046640 DDB1Q16531 1140 aa15.37■□□□□ 0.05
CTNS-201ENST00000046640 FAM200AQ8TCP9 573 aa15.37■□□□□ 0.05
CTNS-201ENST00000046640 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.37■□□□□ 0.05
CTNS-201ENST00000046640 ADD1P35611 737 aaKnown RBP15.36■□□□□ 0.05
CTNS-201ENST00000046640 CRKLP46109 303 aaKnown RBP15.36■□□□□ 0.05
CTNS-201ENST00000046640 CHAF1AQ13111 956 aaPredicted RBP15.36■□□□□ 0.05
CTNS-201ENST00000046640 VGLL2Q8N8G2 317 aa15.36■□□□□ 0.05
CTNS-201ENST00000046640 MPHOSPH8Q99549 860 aa15.36■□□□□ 0.05
CTNS-201ENST00000046640 SENP2Q9HC62 589 aa15.36■□□□□ 0.05
CTNS-201ENST00000046640 CDHR2Q9BYE9 1310 aa15.36■□□□□ 0.05
CTNS-201ENST00000046640 WTIPA6NIX2 430 aaPredicted RBP15.36■□□□□ 0.05
CTNS-201ENST00000046640 GOLGA6L6A8MZA4 724 aa15.36■□□□□ 0.05
CTNS-201ENST00000046640 KCNQ2O43526 872 aa15.36■□□□□ 0.05
CTNS-201ENST00000046640 ADD2P35612 726 aa15.36■□□□□ 0.05
CTNS-201ENST00000046640 LLPHQ9BRT6 129 aaKnown RBP15.36■□□□□ 0.05
CTNS-201ENST00000046640 CCDC94Q9BW85 323 aaPredicted RBP15.36■□□□□ 0.05
CTNS-201ENST00000046640 AGXT2Q9BYV1 514 aa15.36■□□□□ 0.05
CTNS-201ENST00000046640 FBXO3Q9UK99 471 aa15.36■□□□□ 0.05
CTNS-201ENST00000046640 CFAP45Q9UL16 551 aa15.36■□□□□ 0.05
CTNS-201ENST00000046640 CPLX1O14810 134 aa15.35■□□□□ 0.05
CTNS-201ENST00000046640 ME1P48163 572 aa15.35■□□□□ 0.05
CTNS-201ENST00000046640 MTERF4Q7Z6M4 381 aaKnown RBP15.35■□□□□ 0.05
CTNS-201ENST00000046640 TBC1D10CQ8IV04 446 aa15.35■□□□□ 0.05
CTNS-201ENST00000046640 NCOA7Q8NI08 942 aa15.35■□□□□ 0.05
CTNS-201ENST00000046640 NBPF3Q9H094 633 aa15.35■□□□□ 0.05
CTNS-201ENST00000046640 ZSCAN16Q9H4T2 348 aaPredicted RBP15.35■□□□□ 0.05
CTNS-201ENST00000046640 PDIA4P13667 645 aaKnown RBP15.35■□□□□ 0.05
CTNS-201ENST00000046640 IL6STP40189 918 aaPredicted RBP15.35■□□□□ 0.05
CTNS-201ENST00000046640 INTS5Q6P9B9 1019 aaKnown RBP15.35■□□□□ 0.05
CTNS-201ENST00000046640 CCAR1Q8IX12 1150 aaKnown RBP15.35■□□□□ 0.05
CTNS-201ENST00000046640 ZNF274Q96GC6 653 aaPredicted RBP15.35■□□□□ 0.05
CTNS-201ENST00000046640 AIFM3Q96NN9 605 aa15.35■□□□□ 0.05
CTNS-201ENST00000046640 MYL10Q9BUA6 226 aa15.35■□□□□ 0.05
CTNS-201ENST00000046640 SPTLC3Q9NUV7 552 aa15.35■□□□□ 0.05
CTNS-201ENST00000046640 CARMIL3Q8ND23 1372 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms