RNA–Protein interactions for RNA: ENST00000009180.8

CD9-201, Transcript of CD9 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD9, Length 1,169 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-201ENST00000009180 ZNF646O15015 1829 aaPredicted RBP12.37□□□□□ -0.43
CD9-201ENST00000009180 KDM2BQ8NHM5 1336 aa12.37□□□□□ -0.43
CD9-201ENST00000009180 PSMD14O00487 310 aa12.36□□□□□ -0.43
CD9-201ENST00000009180 DDNO94850 711 aaPredicted RBP12.36□□□□□ -0.43
CD9-201ENST00000009180 IFIT2P09913 472 aaKnown RBP12.36□□□□□ -0.43
CD9-201ENST00000009180 EIF6P56537 245 aaKnown RBP12.36□□□□□ -0.43
CD9-201ENST00000009180 GTF2IP78347 998 aa12.36□□□□□ -0.43
CD9-201ENST00000009180 SCARF1Q14162 830 aa12.36□□□□□ -0.43
CD9-201ENST00000009180 TSHZ3Q63HK5 1081 aa12.36□□□□□ -0.43
CD9-201ENST00000009180 CIAPIN1Q6FI81 312 aa12.36□□□□□ -0.43
CD9-201ENST00000009180 PI16Q6UXB8 463 aa12.36□□□□□ -0.43
CD9-201ENST00000009180 PODNQ7Z5L7 613 aa12.36□□□□□ -0.43
CD9-201ENST00000009180 CCDC136Q96JN2 1154 aa12.36□□□□□ -0.43
CD9-201ENST00000009180 CHD4Q14839 1912 aa12.35□□□□□ -0.43
CD9-201ENST00000009180 USP17L3A6NCW0 530 aa12.35□□□□□ -0.43
CD9-201ENST00000009180 USP17L4A6NCW7 530 aa12.35□□□□□ -0.43
CD9-201ENST00000009180 TULP1O00294 542 aaPredicted RBP12.35□□□□□ -0.43
CD9-201ENST00000009180 FRAT2O75474 233 aaPredicted RBP12.35□□□□□ -0.43
CD9-201ENST00000009180 NUCB1Q02818 461 aa12.35□□□□□ -0.43
CD9-201ENST00000009180 RASGRF1Q13972 1273 aa12.35□□□□□ -0.43
CD9-201ENST00000009180 TTC39AQ5SRH9 613 aa12.35□□□□□ -0.43
CD9-201ENST00000009180 USP17L1Q7RTZ2 530 aa12.35□□□□□ -0.43
CD9-201ENST00000009180 SKAP1Q86WV1 359 aa12.35□□□□□ -0.43
CD9-201ENST00000009180 ZNF526Q8TF50 670 aaPredicted RBP12.35□□□□□ -0.43
CD9-201ENST00000009180 SNRKQ9NRH2 765 aa12.35□□□□□ -0.43
CD9-201ENST00000009180 PPP4R2Q9NY27 417 aa12.35□□□□□ -0.43
CD9-201ENST00000009180 ZBTB12Q9Y330 459 aaPredicted RBP12.35□□□□□ -0.43
CD9-201ENST00000009180 NDUFB9Q9Y6M9 179 aa12.35□□□□□ -0.43
CD9-201ENST00000009180 ZC3H4Q9UPT8 1303 aaKnown RBP12.35□□□□□ -0.43
CD9-201ENST00000009180 ARID4AP29374 1257 aaPredicted RBP12.34□□□□□ -0.43
CD9-201ENST00000009180 GMPSP49915 693 aaPredicted RBP12.34□□□□□ -0.43
CD9-201ENST00000009180 DACT2Q5SW24 774 aa12.34□□□□□ -0.43
CD9-201ENST00000009180 CHD1LQ86WJ1 897 aa12.34□□□□□ -0.43
CD9-201ENST00000009180 CERS5Q8N5B7 392 aa12.34□□□□□ -0.43
CD9-201ENST00000009180 GNL3LQ9NVN8 582 aaKnown RBP12.34□□□□□ -0.43
CD9-201ENST00000009180 SHTN1A0MZ66 631 aa12.33□□□□□ -0.44
CD9-201ENST00000009180 PDE4AP27815 886 aa12.33□□□□□ -0.44
CD9-201ENST00000009180 MCAMP43121 646 aa12.33□□□□□ -0.44
CD9-201ENST00000009180 GRIK5Q16478 980 aa12.33□□□□□ -0.44
CD9-201ENST00000009180 CCDC158Q5M9N0 1113 aa12.33□□□□□ -0.44
CD9-201ENST00000009180 ERICH6BQ5W0A0 696 aa12.33□□□□□ -0.44
CD9-201ENST00000009180 TTLL5Q6EMB2 1281 aa12.33□□□□□ -0.44
CD9-201ENST00000009180 RSBN1LQ6PCB5 846 aaPredicted RBP12.33□□□□□ -0.44
CD9-201ENST00000009180 CENPQQ7L2Z9 268 aaPredicted RBP12.33□□□□□ -0.44
CD9-201ENST00000009180 HMG20BQ9P0W2 317 aa12.33□□□□□ -0.44
CD9-201ENST00000009180 ZBTB47Q9UFB7 747 aaPredicted RBP12.33□□□□□ -0.44
CD9-201ENST00000009180 FAM205AQ6ZU69 1335 aa12.33□□□□□ -0.44
CD9-201ENST00000009180 SALL3Q9BXA9 1300 aa12.33□□□□□ -0.44
CD9-201ENST00000009180 PSME4Q14997 1843 aa12.32□□□□□ -0.44
CD9-201ENST00000009180 GLTPD2A6NH11 291 aa12.32□□□□□ -0.44
CD9-201ENST00000009180 VIL1P09327 827 aaKnown RBP12.32□□□□□ -0.44
CD9-201ENST00000009180 UQCRFS1P1P0C7P4 283 aa12.32□□□□□ -0.44
CD9-201ENST00000009180 TNIP1Q15025 636 aa12.32□□□□□ -0.44
CD9-201ENST00000009180 STRIP1Q5VSL9 837 aa12.32□□□□□ -0.44
CD9-201ENST00000009180 GPC2Q8N158 579 aa12.32□□□□□ -0.44
CD9-201ENST00000009180 SPATA5Q8NB90 893 aa12.32□□□□□ -0.44
CD9-201ENST00000009180 DENND2AQ9ULE3 1009 aa12.32□□□□□ -0.44
CD9-201ENST00000009180 F8W031 263 aaPredicted RBP12.31□□□□□ -0.44
CD9-201ENST00000009180 SEMA3EO15041 775 aa12.31□□□□□ -0.44
CD9-201ENST00000009180 MX1P20591 662 aa12.31□□□□□ -0.44
CD9-201ENST00000009180 YY1P25490 414 aa12.31□□□□□ -0.44
CD9-201ENST00000009180 ZAP70P43403 619 aa12.31□□□□□ -0.44
CD9-201ENST00000009180 SCNN1DP51172 638 aa12.31□□□□□ -0.44
CD9-201ENST00000009180 MFSD14BQ5SR56 506 aa12.31□□□□□ -0.44
CD9-201ENST00000009180 TBC1D9Q6ZT07 1266 aa12.31□□□□□ -0.44
CD9-201ENST00000009180 EDC3Q96F86 508 aaKnown RBP12.31□□□□□ -0.44
CD9-201ENST00000009180 DNAJC2Q99543 621 aaKnown RBP12.31□□□□□ -0.44
CD9-201ENST00000009180 ECHDC1Q9NTX5 307 aa12.31□□□□□ -0.44
CD9-201ENST00000009180 MYH13Q9UKX3 1938 aa12.31□□□□□ -0.44
CD9-201ENST00000009180 DPY19L2Q6NUT2 758 aa12.3□□□□□ -0.44
CD9-201ENST00000009180 KIAA0825Q8IV33 1275 aa12.3□□□□□ -0.44
CD9-201ENST00000009180 ZNF512BQ96KM6 892 aaPredicted RBP12.3□□□□□ -0.44
CD9-201ENST00000009180 GMLQ99445 158 aa12.3□□□□□ -0.44
CD9-201ENST00000009180 BOLA2Q9H3K6 86 aa12.3□□□□□ -0.44
CD9-201ENST00000009180 NMRK2Q9NPI5 230 aa12.3□□□□□ -0.44
CD9-201ENST00000009180 PIH1D3Q9NQM4 214 aaKnown RBP12.3□□□□□ -0.44
CD9-201ENST00000009180 WDR90Q96KV7 1748 aa12.29□□□□□ -0.44
CD9-201ENST00000009180 ADAMTSL1Q8N6G6 1762 aa12.29□□□□□ -0.44
CD9-201ENST00000009180 MAP4K4O95819 1239 aaPredicted RBP12.29□□□□□ -0.44
CD9-201ENST00000009180 CYP2E1P05181 493 aaPredicted RBP12.29□□□□□ -0.44
CD9-201ENST00000009180 ATP5JP18859 108 aa12.29□□□□□ -0.44
CD9-201ENST00000009180 PRDX5P30044 214 aa12.29□□□□□ -0.44
CD9-201ENST00000009180 EPS15P42566 896 aa12.29□□□□□ -0.44
CD9-201ENST00000009180 PDE1AP54750 535 aa12.29□□□□□ -0.44
CD9-201ENST00000009180 MICALL2Q8IY33 904 aa12.29□□□□□ -0.44
CD9-201ENST00000009180 WDR66Q8TBY9 1149 aa12.29□□□□□ -0.44
CD9-201ENST00000009180 PI4K2BQ8TCG2 481 aa12.29□□□□□ -0.44
CD9-201ENST00000009180 GPATCH3Q96I76 525 aa12.29□□□□□ -0.44
CD9-201ENST00000009180 ANTXR1Q9H6X2 564 aa12.29□□□□□ -0.44
CD9-201ENST00000009180 ABCF2Q9UG63 623 aa12.29□□□□□ -0.44
CD9-201ENST00000009180 PDS5AQ29RF7 1337 aaKnown RBP12.29□□□□□ -0.44
CD9-201ENST00000009180 AKAP11Q9UKA4 1901 aa12.29□□□□□ -0.44
CD9-201ENST00000009180 POTECB2RU33 542 aa12.28□□□□□ -0.44
CD9-201ENST00000009180 GOLIM4O00461 696 aa12.28□□□□□ -0.44
CD9-201ENST00000009180 EGFRP00533 1210 aa12.28□□□□□ -0.44
CD9-201ENST00000009180 RPS12P25398 132 aaKnown RBP12.28□□□□□ -0.44
CD9-201ENST00000009180 PLEKHM2Q8IWE5 1019 aa12.28□□□□□ -0.44
CD9-201ENST00000009180 AGBL3Q8NEM8 1001 aa12.28□□□□□ -0.44
CD9-201ENST00000009180 L3MBTL3Q96JM7 780 aaPredicted RBP12.28□□□□□ -0.44
CD9-201ENST00000009180 RRAGCQ9HB90 399 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms