RNA–Protein interactions for RNA: ENST00000002596.5

HS3ST1-201, Transcript of heparan sulfate-glucosamine 3-sulfotransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HS3ST1, Length 8,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST1-201ENST00000002596 CCDC122Q5T0U0 273 aa13.91□□□□□ -0.18
HS3ST1-201ENST00000002596 PPFIBP2Q8ND30 876 aa13.91□□□□□ -0.18
HS3ST1-201ENST00000002596 EVI5LQ96CN4 794 aa13.91□□□□□ -0.18
HS3ST1-201ENST00000002596 AKR1B10O60218 316 aa13.91□□□□□ -0.18
HS3ST1-201ENST00000002596 FAM13AO94988 1023 aa13.91□□□□□ -0.18
HS3ST1-201ENST00000002596 BMP15O95972 392 aa13.91□□□□□ -0.18
HS3ST1-201ENST00000002596 SPOUT1Q5T280 376 aaKnown RBP13.91□□□□□ -0.18
HS3ST1-201ENST00000002596 NBPF6Q5VWK0 638 aa13.91□□□□□ -0.18
HS3ST1-201ENST00000002596 NBPF5PQ86XG9 351 aaPredicted RBP13.91□□□□□ -0.18
HS3ST1-201ENST00000002596 RNF217Q8TC41 542 aa13.91□□□□□ -0.18
HS3ST1-201ENST00000002596 NBPF4Q96M43 638 aa13.91□□□□□ -0.18
HS3ST1-201ENST00000002596 IARSP41252 1262 aaKnown RBP13.91□□□□□ -0.18
HS3ST1-201ENST00000002596 RAP1GDS1P52306 607 aa13.91□□□□□ -0.18
HS3ST1-201ENST00000002596 UBLCP1Q8WVY7 318 aaPredicted RBP13.91□□□□□ -0.18
HS3ST1-201ENST00000002596 SLC26A6Q9BXS9 759 aa13.91□□□□□ -0.18
HS3ST1-201ENST00000002596 SPDYE3A6NKU9 549 aa13.91□□□□□ -0.18
HS3ST1-201ENST00000002596 NSD3Q9BZ95 1437 aa13.91□□□□□ -0.18
HS3ST1-201ENST00000002596 MICU3Q86XE3 530 aa13.91□□□□□ -0.18
HS3ST1-201ENST00000002596 CAMSAP2Q08AD1 1489 aa13.91□□□□□ -0.18
HS3ST1-201ENST00000002596 AFAP1Q8N556 730 aa13.91□□□□□ -0.18
HS3ST1-201ENST00000002596 CASKIN1Q8WXD9 1431 aa13.91□□□□□ -0.18
HS3ST1-201ENST00000002596 HNRNPCL2B2RXH8 293 aa13.91□□□□□ -0.18
HS3ST1-201ENST00000002596 DAPK3O43293 454 aa13.91□□□□□ -0.18
HS3ST1-201ENST00000002596 HNRNPCL1O60812 293 aaKnown RBP13.91□□□□□ -0.18
HS3ST1-201ENST00000002596 ALDH3A1P30838 453 aa13.91□□□□□ -0.18
HS3ST1-201ENST00000002596 MAN1A1P33908 653 aa13.91□□□□□ -0.18
HS3ST1-201ENST00000002596 GABPB2Q8TAK5 448 aaPredicted RBP13.91□□□□□ -0.18
HS3ST1-201ENST00000002596 TRIM55Q9BYV6 548 aa13.91□□□□□ -0.18
HS3ST1-201ENST00000002596 LUC7L2Q9Y383 392 aaKnown RBP13.91□□□□□ -0.18
HS3ST1-201ENST00000002596 CTAGE9A4FU28 777 aa13.9□□□□□ -0.18
HS3ST1-201ENST00000002596 NUDT16Q96DE0 195 aaKnown RBP13.9□□□□□ -0.18
HS3ST1-201ENST00000002596 KRT23Q9C075 422 aa13.9□□□□□ -0.18
HS3ST1-201ENST00000002596 STX8Q9UNK0 236 aa13.9□□□□□ -0.18
HS3ST1-201ENST00000002596 PRG4Q92954 1404 aaPredicted RBP13.9□□□□□ -0.18
HS3ST1-201ENST00000002596 TTC14Q96N46 770 aa13.9□□□□□ -0.18
HS3ST1-201ENST00000002596 ZNF830Q96NB3 372 aaPredicted RBP13.9□□□□□ -0.18
HS3ST1-201ENST00000002596 SETDB2Q96T68 719 aa13.9□□□□□ -0.18
HS3ST1-201ENST00000002596 RNF8O76064 485 aa13.9□□□□□ -0.18
HS3ST1-201ENST00000002596 SLC8A3P57103 927 aa13.9□□□□□ -0.18
HS3ST1-201ENST00000002596 LACTBP83111 547 aaPredicted RBP13.9□□□□□ -0.18
HS3ST1-201ENST00000002596 SKAP1Q86WV1 359 aa13.9□□□□□ -0.18
HS3ST1-201ENST00000002596 CCDC125Q86Z20 511 aa13.9□□□□□ -0.18
HS3ST1-201ENST00000002596 ANKRD24Q8TF21 1146 aa13.9□□□□□ -0.18
HS3ST1-201ENST00000002596 DDX19AQ9NUU7 478 aaKnown RBP13.9□□□□□ -0.18
HS3ST1-201ENST00000002596 CNGA1P29973 690 aa13.9□□□□□ -0.19
HS3ST1-201ENST00000002596 ZNF165P49910 485 aa13.9□□□□□ -0.19
HS3ST1-201ENST00000002596 GBP6Q6ZN66 633 aa13.9□□□□□ -0.19
HS3ST1-201ENST00000002596 KSR1Q8IVT5 923 aa13.9□□□□□ -0.19
HS3ST1-201ENST00000002596 KRT222Q8N1A0 295 aa13.9□□□□□ -0.19
HS3ST1-201ENST00000002596 TMTC2Q8N394 836 aa13.9□□□□□ -0.19
HS3ST1-201ENST00000002596 ZBTB24O43167 697 aaPredicted RBP13.89□□□□□ -0.19
HS3ST1-201ENST00000002596 GNAQP50148 359 aa13.89□□□□□ -0.19
HS3ST1-201ENST00000002596 PTPRCP08575 1304 aa13.89□□□□□ -0.19
HS3ST1-201ENST00000002596 FAM170AA1A519 330 aa13.89□□□□□ -0.19
HS3ST1-201ENST00000002596 NCOA7Q8NI08 942 aa13.89□□□□□ -0.19
HS3ST1-201ENST00000002596 ZNF644Q9H582 1327 aaPredicted RBP13.89□□□□□ -0.19
HS3ST1-201ENST00000002596 BUB1BO60566 1050 aaPredicted RBP13.89□□□□□ -0.19
HS3ST1-201ENST00000002596 HAND2P61296 217 aa13.89□□□□□ -0.19
HS3ST1-201ENST00000002596 PDZD8Q8NEN9 1154 aa13.89□□□□□ -0.19
HS3ST1-201ENST00000002596 CYLC1P35663 651 aaPredicted RBP13.89□□□□□ -0.19
HS3ST1-201ENST00000002596 FBXW4P57775 412 aa13.89□□□□□ -0.19
HS3ST1-201ENST00000002596 MIER3Q7Z3K6 550 aa13.89□□□□□ -0.19
HS3ST1-201ENST00000002596 LMBR1Q8WVP7 490 aa13.89□□□□□ -0.19
HS3ST1-201ENST00000002596 DBF4Q9UBU7 674 aaPredicted RBP13.89□□□□□ -0.19
HS3ST1-201ENST00000002596 USH1CQ9Y6N9 552 aa13.89□□□□□ -0.19
HS3ST1-201ENST00000002596 KIAA1107Q9UPP5 1409 aa13.89□□□□□ -0.19
HS3ST1-201ENST00000002596 COG7P83436 770 aa13.89□□□□□ -0.19
HS3ST1-201ENST00000002596 UTP14CQ5TAP6 766 aaKnown RBP13.89□□□□□ -0.19
HS3ST1-201ENST00000002596 ZNF804AQ7Z570 1209 aa13.89□□□□□ -0.19
HS3ST1-201ENST00000002596 CACNA2D3Q8IZS8 1091 aa13.88□□□□□ -0.19
HS3ST1-201ENST00000002596 ERCC6LQ2NKX8 1250 aa13.88□□□□□ -0.19
HS3ST1-201ENST00000002596 BEGAINQ9BUH8 593 aa13.88□□□□□ -0.19
HS3ST1-201ENST00000002596 NYXQ9GZU5 481 aa13.88□□□□□ -0.19
HS3ST1-201ENST00000002596 TRIM35Q9UPQ4 493 aa13.88□□□□□ -0.19
HS3ST1-201ENST00000002596 CNNM2Q9H8M5 875 aa13.88□□□□□ -0.19
HS3ST1-201ENST00000002596 USP16Q9Y5T5 823 aa13.88□□□□□ -0.19
HS3ST1-201ENST00000002596 CCDC171Q6TFL3 1326 aa13.88□□□□□ -0.19
HS3ST1-201ENST00000002596 PALM3A6NDB9 673 aaPredicted RBP13.88□□□□□ -0.19
HS3ST1-201ENST00000002596 CAVIN2O95810 425 aa13.88□□□□□ -0.19
HS3ST1-201ENST00000002596 CAPN2P17655 700 aa13.88□□□□□ -0.19
HS3ST1-201ENST00000002596 GPTP24298 496 aa13.88□□□□□ -0.19
HS3ST1-201ENST00000002596 ITIH3Q06033 890 aa13.88□□□□□ -0.19
HS3ST1-201ENST00000002596 INF2Q27J81 1249 aa13.88□□□□□ -0.19
HS3ST1-201ENST00000002596 HP1BP3Q5SSJ5 553 aaPredicted RBP13.88□□□□□ -0.19
HS3ST1-201ENST00000002596 LDHAL6AQ6ZMR3 332 aa13.88□□□□□ -0.19
HS3ST1-201ENST00000002596 CEP128Q6ZU80 1094 aa13.88□□□□□ -0.19
HS3ST1-201ENST00000002596 HARSP12081 509 aaKnown RBP13.88□□□□□ -0.19
HS3ST1-201ENST00000002596 HMG20BQ9P0W2 317 aa13.88□□□□□ -0.19
HS3ST1-201ENST00000002596 SAMD15Q9P1V8 674 aa13.88□□□□□ -0.19
HS3ST1-201ENST00000002596 CASP2P42575 452 aa13.88□□□□□ -0.19
HS3ST1-201ENST00000002596 CCDC102BQ68D86 513 aa13.88□□□□□ -0.19
HS3ST1-201ENST00000002596 TNPO1Q92973 898 aaKnown RBP13.88□□□□□ -0.19
HS3ST1-201ENST00000002596 ZSCAN32Q9NX65 697 aa13.88□□□□□ -0.19
HS3ST1-201ENST00000002596 VPS18Q9P253 973 aa13.88□□□□□ -0.19
HS3ST1-201ENST00000002596 SPDYE2BA6NHP3 402 aa13.87□□□□□ -0.19
HS3ST1-201ENST00000002596 SPDYE6P0CI01 402 aa13.87□□□□□ -0.19
HS3ST1-201ENST00000002596 KRT5P13647 590 aa13.87□□□□□ -0.19
HS3ST1-201ENST00000002596 TMPOP42166 694 aaKnown RBP13.87□□□□□ -0.19
HS3ST1-201ENST00000002596 RBBP5Q15291 538 aaKnown RBP13.87□□□□□ -0.19
HS3ST1-201ENST00000002596 GIMAP6Q6P9H5 292 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms