RNA–Protein interactions for RNA: ENSMUST00000213114.1

Ldlr-202, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,318 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-202ENSMUST00000213114 Irs4Q9Z0Y7 1216 aa10.83□□□□□ -0.68
Ldlr-202ENSMUST00000213114 Gm9992B2RWK3 458 aa10.82□□□□□ -0.68
Ldlr-202ENSMUST00000213114 Zhx1P70121 873 aa10.82□□□□□ -0.68
Ldlr-202ENSMUST00000213114 Sun3Q5SS91 320 aa10.82□□□□□ -0.68
Ldlr-202ENSMUST00000213114 Unc93aQ710D3 458 aa10.82□□□□□ -0.68
Ldlr-202ENSMUST00000213114 Ccdc172Q810N9 267 aa10.82□□□□□ -0.68
Ldlr-202ENSMUST00000213114 Klhl30Q8C3F7 581 aa10.82□□□□□ -0.68
Ldlr-202ENSMUST00000213114 St5Q924W7 1134 aa10.82□□□□□ -0.68
Ldlr-202ENSMUST00000213114 MicalclQ9D5U9 680 aa10.82□□□□□ -0.68
Ldlr-202ENSMUST00000213114 Znf287Q9EQB9 759 aa10.82□□□□□ -0.68
Ldlr-202ENSMUST00000213114 Pde3aQ9Z0X4 1141 aa10.82□□□□□ -0.68
Ldlr-202ENSMUST00000213114 Ercc6l2Q9JIM3 1537 aa10.82□□□□□ -0.68
Ldlr-202ENSMUST00000213114 Hspd1P63038 573 aaKnown RBP10.82□□□□□ -0.68
Ldlr-202ENSMUST00000213114 Erich4Q3UNU4 136 aa10.82□□□□□ -0.68
Ldlr-202ENSMUST00000213114 Ankrd40Q5SUE8 363 aa10.82□□□□□ -0.68
Ldlr-202ENSMUST00000213114 Anp32cQ64G17 123 aa10.82□□□□□ -0.68
Ldlr-202ENSMUST00000213114 Ranbp6Q8BIV3 1105 aa10.82□□□□□ -0.68
Ldlr-202ENSMUST00000213114 Tpcn2Q8BWC0 731 aa10.82□□□□□ -0.68
Ldlr-202ENSMUST00000213114 Mindy4Q3UQI9 744 aa10.82□□□□□ -0.68
Ldlr-202ENSMUST00000213114 Sik1Q60670 779 aa10.82□□□□□ -0.68
Ldlr-202ENSMUST00000213114 Cnga2Q62398 664 aa10.82□□□□□ -0.68
Ldlr-202ENSMUST00000213114 Smim5Q8BT42 78 aa10.82□□□□□ -0.68
Ldlr-202ENSMUST00000213114 EngaseQ8BX80 734 aa10.82□□□□□ -0.68
Ldlr-202ENSMUST00000213114 Ddx27Q921N6 760 aaKnown RBP10.82□□□□□ -0.68
Ldlr-202ENSMUST00000213114 GmnnO88513 206 aa10.81□□□□□ -0.68
Ldlr-202ENSMUST00000213114 CalrP14211 416 aaKnown RBP10.81□□□□□ -0.68
Ldlr-202ENSMUST00000213114 Gng11P61953 73 aa10.81□□□□□ -0.68
Ldlr-202ENSMUST00000213114 Olfm5Q8BU90 496 aa10.81□□□□□ -0.68
Ldlr-202ENSMUST00000213114 Def6Q8C2K1 630 aa10.81□□□□□ -0.68
Ldlr-202ENSMUST00000213114 Pcdhb22Q91XZ8 794 aa10.81□□□□□ -0.68
Ldlr-202ENSMUST00000213114 Col4a3bpQ9EQG9 624 aa10.81□□□□□ -0.68
Ldlr-202ENSMUST00000213114 Pus3Q9JI38 481 aa10.81□□□□□ -0.68
Ldlr-202ENSMUST00000213114 Foxo3Q9WVH4 672 aa10.81□□□□□ -0.68
Ldlr-202ENSMUST00000213114 Pdcd11Q6NS46 1862 aaKnown RBP10.81□□□□□ -0.68
Ldlr-202ENSMUST00000213114 Bin2D3Z6Q9 489 aa10.81□□□□□ -0.68
Ldlr-202ENSMUST00000213114 Paxbp1P58501 919 aa10.81□□□□□ -0.68
Ldlr-202ENSMUST00000213114 Tbc1d2bQ3U0J8 965 aa10.81□□□□□ -0.68
Ldlr-202ENSMUST00000213114 Tacc1Q6Y685 774 aa10.81□□□□□ -0.68
Ldlr-202ENSMUST00000213114 DlatQ8BMF4 642 aa10.81□□□□□ -0.68
Ldlr-202ENSMUST00000213114 Maats1Q8BRC6 783 aa10.81□□□□□ -0.68
Ldlr-202ENSMUST00000213114 Commd10Q8JZY2 202 aa10.81□□□□□ -0.68
Ldlr-202ENSMUST00000213114 Tmx1Q8VBT0 278 aa10.81□□□□□ -0.68
Ldlr-202ENSMUST00000213114 Klhl10Q9D5V2 608 aa10.81□□□□□ -0.68
Ldlr-202ENSMUST00000213114 Atp12aQ9Z1W8 1035 aa10.81□□□□□ -0.68
Ldlr-202ENSMUST00000213114 Clec11aO88200 328 aa10.81□□□□□ -0.68
Ldlr-202ENSMUST00000213114 Usp5P56399 858 aaKnown RBP10.81□□□□□ -0.68
Ldlr-202ENSMUST00000213114 MycbpapQ5SUV2 932 aa10.81□□□□□ -0.68
Ldlr-202ENSMUST00000213114 Msl1Q6PDM1 616 aa10.81□□□□□ -0.68
Ldlr-202ENSMUST00000213114 Ercc6lQ8BHK9 1240 aa10.81□□□□□ -0.68
Ldlr-202ENSMUST00000213114 Naa16Q9DBB4 864 aa10.81□□□□□ -0.68
Ldlr-202ENSMUST00000213114 CenphQ9QYM8 241 aa10.81□□□□□ -0.68
Ldlr-202ENSMUST00000213114 Cdk12Q14AX6 1484 aaKnown RBP10.81□□□□□ -0.68
Ldlr-202ENSMUST00000213114 Elmsan1E9Q2I4 1089 aaKnown RBP10.8□□□□□ -0.68
Ldlr-202ENSMUST00000213114 Trim55G3X8Y1 545 aa10.8□□□□□ -0.68
Ldlr-202ENSMUST00000213114 Myl6bQ8CI43 207 aa10.8□□□□□ -0.68
Ldlr-202ENSMUST00000213114 CemipQ8BI06 1361 aa10.8□□□□□ -0.68
Ldlr-202ENSMUST00000213114 AceP09470 1312 aa10.8□□□□□ -0.68
Ldlr-202ENSMUST00000213114 Prr29B1ARI9 187 aa10.8□□□□□ -0.68
Ldlr-202ENSMUST00000213114 Atp8a2P98200 1148 aa10.8□□□□□ -0.68
Ldlr-202ENSMUST00000213114 Zbtb38Q3LR78 1197 aa10.8□□□□□ -0.68
Ldlr-202ENSMUST00000213114 Ano2Q8CFW1 1002 aa10.8□□□□□ -0.68
Ldlr-202ENSMUST00000213114 Dbndd1Q9CZ00 160 aa10.8□□□□□ -0.68
Ldlr-202ENSMUST00000213114 Sycp2lA0A0M3U1B0 842 aa10.8□□□□□ -0.68
Ldlr-202ENSMUST00000213114 Igf2bp2Q5SF07 592 aaKnown RBP10.8□□□□□ -0.68
Ldlr-202ENSMUST00000213114 Tekt3Q6X6Z7 490 aa10.8□□□□□ -0.68
Ldlr-202ENSMUST00000213114 Ift74Q8BKE9 600 aa10.8□□□□□ -0.68
Ldlr-202ENSMUST00000213114 InsrrQ9WTL4 1300 aa10.8□□□□□ -0.68
Ldlr-202ENSMUST00000213114 CltaO08585 235 aa10.8□□□□□ -0.68
Ldlr-202ENSMUST00000213114 Gnat2P50149 354 aa10.8□□□□□ -0.68
Ldlr-202ENSMUST00000213114 Pex1Q5BL07 1284 aa10.8□□□□□ -0.68
Ldlr-202ENSMUST00000213114 Mrpl50Q8VDT9 159 aaKnown RBP10.8□□□□□ -0.68
Ldlr-202ENSMUST00000213114 Ccdc7Q9D541 371 aa10.8□□□□□ -0.68
Ldlr-202ENSMUST00000213114 Bach2P97303 839 aa10.79□□□□□ -0.68
Ldlr-202ENSMUST00000213114 Lrrfip1Q3UZ39 729 aaKnown RBP10.79□□□□□ -0.68
Ldlr-202ENSMUST00000213114 Luc7l2Q7TNC4 392 aaKnown RBP10.79□□□□□ -0.68
Ldlr-202ENSMUST00000213114 Dcaf5Q80T85 946 aa10.79□□□□□ -0.68
Ldlr-202ENSMUST00000213114 Ppp1r37Q8BKR5 712 aa10.79□□□□□ -0.68
Ldlr-202ENSMUST00000213114 Cap2Q9CYT6 476 aa10.79□□□□□ -0.68
Ldlr-202ENSMUST00000213114 Ccdc94Q9D6J3 314 aa10.79□□□□□ -0.68
Ldlr-202ENSMUST00000213114 Hdac6Q9Z2V5 1149 aa10.79□□□□□ -0.68
Ldlr-202ENSMUST00000213114 Bsdc1Q80Y55 427 aa10.79□□□□□ -0.68
Ldlr-202ENSMUST00000213114 Tex2Q6ZPJ0 1128 aaKnown RBP10.79□□□□□ -0.68
Ldlr-202ENSMUST00000213114 Dnajc5gQ8C632 165 aa10.79□□□□□ -0.68
Ldlr-202ENSMUST00000213114 Lonrf3Q9D4H7 753 aa10.79□□□□□ -0.68
Ldlr-202ENSMUST00000213114 Osbpl5Q9ER64 874 aa10.79□□□□□ -0.68
Ldlr-202ENSMUST00000213114 Abcc12Q80WJ6 1366 aa10.78□□□□□ -0.68
Ldlr-202ENSMUST00000213114 Stox1B2RQL2 990 aa10.78□□□□□ -0.68
Ldlr-202ENSMUST00000213114 Mapkapk5O54992 473 aa10.78□□□□□ -0.68
Ldlr-202ENSMUST00000213114 Gm28047Q3US59 414 aa10.78□□□□□ -0.68
Ldlr-202ENSMUST00000213114 RragbQ6NTA4 374 aa10.78□□□□□ -0.68
Ldlr-202ENSMUST00000213114 IqcgQ80W32 419 aa10.78□□□□□ -0.68
Ldlr-202ENSMUST00000213114 TrhQ62361 256 aa10.78□□□□□ -0.68
Ldlr-202ENSMUST00000213114 Fchsd1Q6PFY1 688 aa10.78□□□□□ -0.68
Ldlr-202ENSMUST00000213114 Zfp202Q8C879 641 aa10.78□□□□□ -0.68
Ldlr-202ENSMUST00000213114 Ttc14Q9CSP9 761 aa10.78□□□□□ -0.68
Ldlr-202ENSMUST00000213114 Prex1Q69ZK0 1650 aa10.78□□□□□ -0.68
Ldlr-202ENSMUST00000213114 Kif3cO35066 796 aa10.78□□□□□ -0.68
Ldlr-202ENSMUST00000213114 Hmgb2P30681 210 aaKnown RBP10.78□□□□□ -0.68
Ldlr-202ENSMUST00000213114 Csrnp1P59054 583 aa10.78□□□□□ -0.68
Ldlr-202ENSMUST00000213114 Nxf7Q80SZ6 620 aaKnown RBP10.78□□□□□ -0.68
Retrieved 100 of 22,080 RNA–protein pairs in 20.8 ms