RNA–Protein interactions for RNA: ENSMUST00000106441.7

Trim47-202, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim47, Length 2,192 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-202ENSMUST00000106441 4931408C20RikE9PWP9 1381 aa21.47■■□□□ 1.03
Trim47-202ENSMUST00000106441 Stat1P42225 749 aa21.47■■□□□ 1.03
Trim47-202ENSMUST00000106441 Eva1cP58659 440 aa21.47■■□□□ 1.03
Trim47-202ENSMUST00000106441 Nek11Q8C0Q4 628 aa21.47■■□□□ 1.03
Trim47-202ENSMUST00000106441 Q8C5K5 320 aa21.47■■□□□ 1.03
Trim47-202ENSMUST00000106441 StrcQ8VIM6 1809 aa21.46■■□□□ 1.03
Trim47-202ENSMUST00000106441 Chmp3Q9CQ10 224 aa21.46■■□□□ 1.03
Trim47-202ENSMUST00000106441 Tbc1d8Q9Z1A9 1134 aa21.46■■□□□ 1.03
Trim47-202ENSMUST00000106441 Brpf3B2KF05 1204 aaKnown RBP21.46■■□□□ 1.03
Trim47-202ENSMUST00000106441 Itga6Q61739 1091 aa21.46■■□□□ 1.03
Trim47-202ENSMUST00000106441 Kcnf1Q7TSH7 493 aa21.46■■□□□ 1.03
Trim47-202ENSMUST00000106441 Me3Q8BMF3 604 aa21.46■■□□□ 1.03
Trim47-202ENSMUST00000106441 Rbm42Q91V81 474 aaKnown RBP21.46■■□□□ 1.03
Trim47-202ENSMUST00000106441 Tceanc2Q8R2M0 207 aa21.45■■□□□ 1.02
Trim47-202ENSMUST00000106441 Lrp5Q91VN0 1614 aa21.45■■□□□ 1.02
Trim47-202ENSMUST00000106441 Ambra1A2AH22 1300 aa21.45■■□□□ 1.02
Trim47-202ENSMUST00000106441 Prl3d3A0A0M6L0J6 224 aa21.44■■□□□ 1.02
Trim47-202ENSMUST00000106441 Dync1i1O88485 628 aa21.44■■□□□ 1.02
Trim47-202ENSMUST00000106441 AppP12023 770 aa21.44■■□□□ 1.02
Trim47-202ENSMUST00000106441 Fam43aQ8BUP8 424 aa21.44■■□□□ 1.02
Trim47-202ENSMUST00000106441 4930504O13RikQ8C5Z9 145 aa21.44■■□□□ 1.02
Trim47-202ENSMUST00000106441 TrdnE9Q9K5 693 aa21.44■■□□□ 1.02
Trim47-202ENSMUST00000106441 RdxP26043 583 aaKnown RBP21.44■■□□□ 1.02
Trim47-202ENSMUST00000106441 Gja10Q9WUS4 505 aa21.44■■□□□ 1.02
Trim47-202ENSMUST00000106441 Lins1Q3U1D0 764 aa21.43■■□□□ 1.02
Trim47-202ENSMUST00000106441 Sh3tc1G3X9F6 1346 aa21.43■■□□□ 1.02
Trim47-202ENSMUST00000106441 Rbbp8nlA2ABX0 614 aa21.43■■□□□ 1.02
Trim47-202ENSMUST00000106441 Rbm5Q91YE7 815 aaKnown RBP21.43■■□□□ 1.02
Trim47-202ENSMUST00000106441 Cfap58B2RW38 873 aa21.42■■□□□ 1.02
Trim47-202ENSMUST00000106441 Sf3b3Q921M3 1217 aaKnown RBP21.42■■□□□ 1.02
Trim47-202ENSMUST00000106441 Sult6b1P0CC03 303 aa21.41■■□□□ 1.02
Trim47-202ENSMUST00000106441 DbnlQ62418 436 aa21.41■■□□□ 1.02
Trim47-202ENSMUST00000106441 Ano1Q8BHY3 960 aa21.41■■□□□ 1.02
Trim47-202ENSMUST00000106441 Iffo2Q8R2V2 512 aa21.41■■□□□ 1.02
Trim47-202ENSMUST00000106441 Nfe2l3Q9WTM4 660 aa21.41■■□□□ 1.02
Trim47-202ENSMUST00000106441 Sh3bgrQ9WUZ7 214 aa21.41■■□□□ 1.02
Trim47-202ENSMUST00000106441 Mctp1E9PV86 951 aa21.41■■□□□ 1.02
Trim47-202ENSMUST00000106441 Dhx38Q80X98 1228 aa21.41■■□□□ 1.02
Trim47-202ENSMUST00000106441 Zswim8Q3UHH1 1832 aaKnown RBP21.41■■□□□ 1.02
Trim47-202ENSMUST00000106441 Hmx1O70218 332 aa21.4■■□□□ 1.02
Trim47-202ENSMUST00000106441 Csrnp1P59054 583 aa21.4■■□□□ 1.02
Trim47-202ENSMUST00000106441 Ctdnep1Q3TP92 244 aa21.4■■□□□ 1.02
Trim47-202ENSMUST00000106441 CtifQ6PEE2 600 aaKnown RBP21.4■■□□□ 1.02
Trim47-202ENSMUST00000106441 Strip1Q8C079 837 aa21.4■■□□□ 1.02
Trim47-202ENSMUST00000106441 Irgm2A0A140LIF8 407 aa21.4■■□□□ 1.02
Trim47-202ENSMUST00000106441 Gm7347D3YYI9 267 aa21.4■■□□□ 1.02
Trim47-202ENSMUST00000106441 Speer4aF8VPX6 267 aa21.4■■□□□ 1.02
Trim47-202ENSMUST00000106441 Cdkn1cP49919 348 aa21.4■■□□□ 1.02
Trim47-202ENSMUST00000106441 Snrpa1P57784 255 aaKnown RBP21.4■■□□□ 1.02
Trim47-202ENSMUST00000106441 Cbx1P83917 185 aaKnown RBP21.4■■□□□ 1.02
Trim47-202ENSMUST00000106441 Kank4Q6P9J5 1016 aa21.4■■□□□ 1.02
Trim47-202ENSMUST00000106441 Sass6Q80UK7 654 aa21.4■■□□□ 1.02
Trim47-202ENSMUST00000106441 Bicd2Q921C5 820 aa21.4■■□□□ 1.02
Trim47-202ENSMUST00000106441 LratQ9JI60 231 aa21.4■■□□□ 1.02
Trim47-202ENSMUST00000106441 Aknad1E9Q8N6 675 aa21.39■■□□□ 1.01
Trim47-202ENSMUST00000106441 1700113H08RikE9Q9Q5 327 aa21.39■■□□□ 1.01
Trim47-202ENSMUST00000106441 VeztQ3ZK22 780 aa21.39■■□□□ 1.01
Trim47-202ENSMUST00000106441 PsdQ5DTT2 1024 aa21.39■■□□□ 1.01
Trim47-202ENSMUST00000106441 Mtmr3Q8K296 1196 aa21.39■■□□□ 1.01
Trim47-202ENSMUST00000106441 Trim30aP15533 496 aa21.38■■□□□ 1.01
Trim47-202ENSMUST00000106441 Atp2b3Q0VF55 1220 aa21.38■■□□□ 1.01
Trim47-202ENSMUST00000106441 Limch1Q3UH68 1057 aa21.38■■□□□ 1.01
Trim47-202ENSMUST00000106441 Ppp4r3aQ6P2K6 820 aa21.38■■□□□ 1.01
Trim47-202ENSMUST00000106441 Atxn2lQ7TQH0 1049 aaKnown RBP21.38■■□□□ 1.01
Trim47-202ENSMUST00000106441 Pde3aQ9Z0X4 1141 aa21.38■■□□□ 1.01
Trim47-202ENSMUST00000106441 Eya2O08575 532 aa21.38■■□□□ 1.01
Trim47-202ENSMUST00000106441 Neurod6P48986 337 aa21.38■■□□□ 1.01
Trim47-202ENSMUST00000106441 Nlrp1aQ2LKU9 1182 aa21.38■■□□□ 1.01
Trim47-202ENSMUST00000106441 Slc38a10Q5I012 1090 aa21.38■■□□□ 1.01
Trim47-202ENSMUST00000106441 Usp44Q8C2S0 711 aa21.38■■□□□ 1.01
Trim47-202ENSMUST00000106441 Erc1Q99MI1 1120 aa21.38■■□□□ 1.01
Trim47-202ENSMUST00000106441 Mtfr1lQ9CWE0 289 aa21.38■■□□□ 1.01
Trim47-202ENSMUST00000106441 Osbpl5Q9ER64 874 aa21.38■■□□□ 1.01
Trim47-202ENSMUST00000106441 Znf609Q8BZ47 1413 aa21.38■■□□□ 1.01
Trim47-202ENSMUST00000106441 Tpd52l1O54818 204 aa21.37■■□□□ 1.01
Trim47-202ENSMUST00000106441 Cdca8Q8BHX3 289 aa21.37■■□□□ 1.01
Trim47-202ENSMUST00000106441 Cdk4P30285 303 aa21.37■■□□□ 1.01
Trim47-202ENSMUST00000106441 Ubash3aQ3V3E1 624 aa21.37■■□□□ 1.01
Trim47-202ENSMUST00000106441 Smarcc2Q6PDG5 1213 aa21.37■■□□□ 1.01
Trim47-202ENSMUST00000106441 Ncoa5Q91W39 579 aaKnown RBP21.37■■□□□ 1.01
Trim47-202ENSMUST00000106441 Col4a5Q63ZW6 1691 aa21.36■■□□□ 1.01
Trim47-202ENSMUST00000106441 Anxa1P10107 346 aaKnown RBP21.36■■□□□ 1.01
Trim47-202ENSMUST00000106441 Gpr182P43142 395 aa21.36■■□□□ 1.01
Trim47-202ENSMUST00000106441 CebpzP53569 1052 aaKnown RBP21.36■■□□□ 1.01
Trim47-202ENSMUST00000106441 Bach1P97302 739 aa21.36■■□□□ 1.01
Trim47-202ENSMUST00000106441 Atg9aQ68FE2 551 aa21.36■■□□□ 1.01
Trim47-202ENSMUST00000106441 Zfp317Q8C0Q5 607 aa21.36■■□□□ 1.01
Trim47-202ENSMUST00000106441 Sde2Q8K1J5 448 aaKnown RBP21.36■■□□□ 1.01
Trim47-202ENSMUST00000106441 Ubxn4Q8VCH8 506 aa21.36■■□□□ 1.01
Trim47-202ENSMUST00000106441 Ciao1Q99KN2 339 aa21.36■■□□□ 1.01
Trim47-202ENSMUST00000106441 Rrs1Q9CYH6 365 aaKnown RBP21.36■■□□□ 1.01
Trim47-202ENSMUST00000106441 Ftl2P49945 183 aa21.36■■□□□ 1.01
Trim47-202ENSMUST00000106441 Tmem109Q3UBX0 243 aa21.36■■□□□ 1.01
Trim47-202ENSMUST00000106441 Polr3gQ6NXY9 223 aa21.36■■□□□ 1.01
Trim47-202ENSMUST00000106441 Dis3l2Q8CI75 870 aaKnown RBP21.36■■□□□ 1.01
Trim47-202ENSMUST00000106441 Serpina10Q8R121 448 aa21.36■■□□□ 1.01
Trim47-202ENSMUST00000106441 Lrrfip2Q91WK0 415 aa21.36■■□□□ 1.01
Trim47-202ENSMUST00000106441 Dnajc14Q921R4 703 aa21.35■■□□□ 1.01
Trim47-202ENSMUST00000106441 Myo3bQ1EG27 1305 aa21.35■■□□□ 1.01
Trim47-202ENSMUST00000106441 Aox4Q3TYQ9 1336 aa21.35■■□□□ 1.01
Retrieved 100 of 22,080 RNA–protein pairs in 67 ms