RNA–Protein interactions for RNA: ENSMUST00000042345.6

Ctnna1-201, Transcript of Catenin alpha-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctnna1, Length 3,698 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctnna1-201ENSMUST00000042345 Sh3bp5lQ99LH9 392 aa10.77□□□□□ -0.69
Ctnna1-201ENSMUST00000042345 Pnpla6Q3TRM4 1355 aa10.77□□□□□ -0.69
Ctnna1-201ENSMUST00000042345 Anp32cQ64G17 123 aa10.77□□□□□ -0.69
Ctnna1-201ENSMUST00000042345 Chmp3Q9CQ10 224 aa10.77□□□□□ -0.69
Ctnna1-201ENSMUST00000042345 NesQ6P5H2 1864 aaKnown RBP10.77□□□□□ -0.69
Ctnna1-201ENSMUST00000042345 Aknad1E9Q8N6 675 aa10.76□□□□□ -0.69
Ctnna1-201ENSMUST00000042345 Ubash3aQ3V3E1 624 aa10.76□□□□□ -0.69
Ctnna1-201ENSMUST00000042345 Znf496Q5SXI5 585 aa10.76□□□□□ -0.69
Ctnna1-201ENSMUST00000042345 Cyp2c23E9Q5K4 494 aa10.76□□□□□ -0.69
Ctnna1-201ENSMUST00000042345 Ube4aE9Q735 1028 aa10.76□□□□□ -0.69
Ctnna1-201ENSMUST00000042345 Tbc1d31Q6NXY1 996 aa10.76□□□□□ -0.69
Ctnna1-201ENSMUST00000042345 ImmtQ8CAQ8 757 aaKnown RBP10.76□□□□□ -0.69
Ctnna1-201ENSMUST00000042345 Ndufa8Q9DCJ5 172 aa10.76□□□□□ -0.69
Ctnna1-201ENSMUST00000042345 Tcof1O08784 1320 aaKnown RBP10.76□□□□□ -0.69
Ctnna1-201ENSMUST00000042345 Aox4Q3TYQ9 1336 aa10.76□□□□□ -0.69
Ctnna1-201ENSMUST00000042345 Rhbdl3P58873 404 aa10.76□□□□□ -0.69
Ctnna1-201ENSMUST00000042345 Nol10Q5RJG1 687 aaKnown RBP10.76□□□□□ -0.69
Ctnna1-201ENSMUST00000042345 Nol12Q8BG17 217 aa10.76□□□□□ -0.69
Ctnna1-201ENSMUST00000042345 Samm50Q8BGH2 469 aa10.76□□□□□ -0.69
Ctnna1-201ENSMUST00000042345 VmacQ8BP01 174 aa10.76□□□□□ -0.69
Ctnna1-201ENSMUST00000042345 Tmem67Q8BR76 992 aa10.76□□□□□ -0.69
Ctnna1-201ENSMUST00000042345 Plcd3Q8K2J0 785 aa10.76□□□□□ -0.69
Ctnna1-201ENSMUST00000042345 Chd1lQ9CXF7 900 aa10.76□□□□□ -0.69
Ctnna1-201ENSMUST00000042345 FliiQ9JJ28 1271 aa10.76□□□□□ -0.69
Ctnna1-201ENSMUST00000042345 PdcQ9QW08 244 aa10.76□□□□□ -0.69
Ctnna1-201ENSMUST00000042345 Lgr5Q9Z1P4 907 aa10.76□□□□□ -0.69
Ctnna1-201ENSMUST00000042345 Wdr33Q8K4P0 1330 aaKnown RBP10.75□□□□□ -0.69
Ctnna1-201ENSMUST00000042345 Nup188Q6ZQH8 1759 aa10.75□□□□□ -0.69
Ctnna1-201ENSMUST00000042345 Mast3Q3U214 1321 aa10.75□□□□□ -0.69
Ctnna1-201ENSMUST00000042345 Mtmr3Q8K296 1196 aa10.75□□□□□ -0.69
Ctnna1-201ENSMUST00000042345 Kcnq3Q8K3F6 873 aa10.75□□□□□ -0.69
Ctnna1-201ENSMUST00000042345 Rufy2Q8R4C2 606 aa10.75□□□□□ -0.69
Ctnna1-201ENSMUST00000042345 Bap1Q99PU7 728 aa10.75□□□□□ -0.69
Ctnna1-201ENSMUST00000042345 Myo3bQ1EG27 1305 aa10.75□□□□□ -0.69
Ctnna1-201ENSMUST00000042345 Cntnap1O54991 1385 aa10.75□□□□□ -0.69
Ctnna1-201ENSMUST00000042345 Mtx1P47802 317 aa10.74□□□□□ -0.69
Ctnna1-201ENSMUST00000042345 Psrc1Q9D0P7 329 aa10.74□□□□□ -0.69
Ctnna1-201ENSMUST00000042345 Naa16Q9DBB4 864 aa10.74□□□□□ -0.69
Ctnna1-201ENSMUST00000042345 Speer4dL7N216 212 aa10.74□□□□□ -0.69
Ctnna1-201ENSMUST00000042345 Gas1Q01721 343 aa10.74□□□□□ -0.69
Ctnna1-201ENSMUST00000042345 Slitrk3Q810B9 980 aa10.74□□□□□ -0.69
Ctnna1-201ENSMUST00000042345 Miga2Q8BK03 593 aa10.74□□□□□ -0.69
Ctnna1-201ENSMUST00000042345 Pdcl3Q8BVF2 240 aa10.74□□□□□ -0.69
Ctnna1-201ENSMUST00000042345 Kiaa0319lQ8K135 1048 aa10.74□□□□□ -0.69
Ctnna1-201ENSMUST00000042345 Stag1Q9D3E6 1258 aa10.74□□□□□ -0.69
Ctnna1-201ENSMUST00000042345 StrcQ8VIM6 1809 aa10.74□□□□□ -0.69
Ctnna1-201ENSMUST00000042345 Slf2Q6P9P0 1278 aa10.74□□□□□ -0.69
Ctnna1-201ENSMUST00000042345 Slc44a1Q6X893 653 aa10.74□□□□□ -0.69
Ctnna1-201ENSMUST00000042345 Mx2Q9WVP9 655 aa10.74□□□□□ -0.69
Ctnna1-201ENSMUST00000042345 Tom1O88746 492 aa10.73□□□□□ -0.69
Ctnna1-201ENSMUST00000042345 Pde6aP27664 859 aa10.73□□□□□ -0.69
Ctnna1-201ENSMUST00000042345 Afg3l2Q8JZQ2 802 aaKnown RBP10.73□□□□□ -0.69
Ctnna1-201ENSMUST00000042345 Mad1l1Q9WTX8 717 aaKnown RBP10.73□□□□□ -0.69
Ctnna1-201ENSMUST00000042345 Krt85Q9Z2T6 507 aa10.73□□□□□ -0.69
Ctnna1-201ENSMUST00000042345 Ubn2Q80WC1 1314 aa10.73□□□□□ -0.69
Ctnna1-201ENSMUST00000042345 Cfap73J3QPZ5 306 aa10.73□□□□□ -0.69
Ctnna1-201ENSMUST00000042345 Tpcn2Q8BWC0 731 aa10.73□□□□□ -0.69
Ctnna1-201ENSMUST00000042345 Pms1Q8K119 917 aa10.73□□□□□ -0.69
Ctnna1-201ENSMUST00000042345 Klc3Q91W40 508 aa10.73□□□□□ -0.69
Ctnna1-201ENSMUST00000042345 NenfQ9CQ45 171 aa10.73□□□□□ -0.69
Ctnna1-201ENSMUST00000042345 Ecm29Q6PDI5 1840 aa10.73□□□□□ -0.69
Ctnna1-201ENSMUST00000042345 Gm13023A2A8N2 498 aa10.73□□□□□ -0.69
Ctnna1-201ENSMUST00000042345 Kansl3A2RSY1 903 aaKnown RBP10.73□□□□□ -0.69
Ctnna1-201ENSMUST00000042345 Gm20425E9Q035 978 aaKnown RBP10.73□□□□□ -0.69
Ctnna1-201ENSMUST00000042345 Dctn1O08788 1281 aa10.73□□□□□ -0.69
Ctnna1-201ENSMUST00000042345 SrprbP47758 269 aa10.73□□□□□ -0.69
Ctnna1-201ENSMUST00000042345 Nap1l3Q794H2 544 aa10.73□□□□□ -0.69
Ctnna1-201ENSMUST00000042345 Ccdc173A0JLY1 547 aa10.72□□□□□ -0.69
Ctnna1-201ENSMUST00000042345 Lipo1J3QME6 396 aa10.72□□□□□ -0.69
Ctnna1-201ENSMUST00000042345 Kiaa0753Q6A000 959 aa10.72□□□□□ -0.69
Ctnna1-201ENSMUST00000042345 Paxip1Q6NZQ4 1056 aa10.72□□□□□ -0.69
Ctnna1-201ENSMUST00000042345 Ces1dQ8VCT4 565 aa10.72□□□□□ -0.69
Ctnna1-201ENSMUST00000042345 Pla2g12bQ99P27 195 aa10.72□□□□□ -0.69
Ctnna1-201ENSMUST00000042345 Bach2P97303 839 aa10.72□□□□□ -0.69
Ctnna1-201ENSMUST00000042345 Q3TYL0 343 aa10.72□□□□□ -0.69
Ctnna1-201ENSMUST00000042345 Acap3Q6NXL5 833 aa10.72□□□□□ -0.69
Ctnna1-201ENSMUST00000042345 Cdca8Q8BHX3 289 aa10.72□□□□□ -0.69
Ctnna1-201ENSMUST00000042345 Eaf2Q91ZD6 262 aa10.72□□□□□ -0.69
Ctnna1-201ENSMUST00000042345 Trim34aQ99PP6 485 aa10.72□□□□□ -0.69
Ctnna1-201ENSMUST00000042345 Aox3G3X982 1335 aa10.72□□□□□ -0.69
Ctnna1-201ENSMUST00000042345 1700029H14RikE9PY36 240 aa10.72□□□□□ -0.69
Ctnna1-201ENSMUST00000042345 Cnnm3Q32NY4 713 aa10.72□□□□□ -0.69
Ctnna1-201ENSMUST00000042345 BcanQ61361 883 aa10.72□□□□□ -0.69
Ctnna1-201ENSMUST00000042345 Spty2d1Q68FG3 682 aa10.72□□□□□ -0.69
Ctnna1-201ENSMUST00000042345 Krt40Q6IFX3 439 aa10.72□□□□□ -0.69
Ctnna1-201ENSMUST00000042345 Sox30Q8CGW4 782 aa10.72□□□□□ -0.69
Ctnna1-201ENSMUST00000042345 Gtf2a1Q99PM3 378 aa10.72□□□□□ -0.69
Ctnna1-201ENSMUST00000042345 Col4a3bpQ9EQG9 624 aa10.72□□□□□ -0.69
Ctnna1-201ENSMUST00000042345 IcoslgQ9JHJ8 322 aa10.72□□□□□ -0.69
Ctnna1-201ENSMUST00000042345 Tsen34Q8BMZ5 316 aa10.71□□□□□ -0.69
Ctnna1-201ENSMUST00000042345 Paf1Q8K2T8 535 aa10.71□□□□□ -0.69
Ctnna1-201ENSMUST00000042345 Nfe2l3Q9WTM4 660 aa10.71□□□□□ -0.69
Ctnna1-201ENSMUST00000042345 Ltbp2O08999 1813 aa10.71□□□□□ -0.69
Ctnna1-201ENSMUST00000042345 Znf638Q61464 1960 aaKnown RBP10.71□□□□□ -0.69
Ctnna1-201ENSMUST00000042345 Nrxn2E9Q7X7 1710 aa10.71□□□□□ -0.69
Ctnna1-201ENSMUST00000042345 U2af2P26369 475 aaKnown RBP10.71□□□□□ -0.69
Ctnna1-201ENSMUST00000042345 Llgl2Q3TJ91 1027 aa10.71□□□□□ -0.69
Ctnna1-201ENSMUST00000042345 Ifit1bl2Q3U687 466 aa10.71□□□□□ -0.69
Ctnna1-201ENSMUST00000042345 Ifit1Q64282 463 aa10.71□□□□□ -0.69
Ctnna1-201ENSMUST00000042345 Ranbp6Q8BIV3 1105 aa10.71□□□□□ -0.69
Retrieved 100 of 22,080 RNA–protein pairs in 57.6 ms