RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Nek9Q8K1R7 984 aa12.96□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Kcnh3Q9WVJ0 1095 aa12.96□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Nrxn1Q9CS84 1514 aa12.96□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Yeats2Q3TUF7 1407 aa12.96□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Tbc1d2B1AVH7 922 aa12.96□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Anxa1P10107 346 aaKnown RBP12.96□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Myd88P22366 296 aa12.96□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Capza3P70190 299 aa12.96□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Sun3Q5SS91 320 aa12.96□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Rufy1Q8BIJ7 712 aa12.96□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Kiaa1524Q8BWY9 907 aa12.96□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Q8CEZ4 452 aa12.96□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Ipo7Q9EPL8 1038 aaKnown RBP12.96□□□□□ -0.33
Topbp1-201ENSMUST00000035164 GnpatP98192 678 aa12.96□□□□□ -0.33
Topbp1-201ENSMUST00000035164 VeztQ3ZK22 780 aa12.96□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Podxl2Q8CAE9 603 aa12.96□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Prc1Q99K43 603 aaKnown RBP12.96□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Acsbg1Q99PU5 721 aa12.96□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Tcof1O08784 1320 aaKnown RBP12.96□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Igsf1Q7TQA1 1317 aa12.96□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Arhgap23Q69ZH9 1483 aa12.96□□□□□ -0.34
Topbp1-201ENSMUST00000035164 Ugt1a6bK9J7B2 531 aa12.96□□□□□ -0.34
Topbp1-201ENSMUST00000035164 Ugt1a6Q64435 531 aa12.96□□□□□ -0.34
Topbp1-201ENSMUST00000035164 Ugt1a7cQ6ZQM8 531 aa12.96□□□□□ -0.34
Topbp1-201ENSMUST00000035164 Snd1Q78PY7 910 aaKnown RBP12.96□□□□□ -0.34
Topbp1-201ENSMUST00000035164 TkfcQ8VC30 578 aa12.96□□□□□ -0.34
Topbp1-201ENSMUST00000035164 PigbQ9JJQ0 542 aa12.96□□□□□ -0.34
Topbp1-201ENSMUST00000035164 Large1Q9Z1M7 756 aa12.96□□□□□ -0.34
Topbp1-201ENSMUST00000035164 Klhl34A2AI76 644 aa12.96□□□□□ -0.34
Topbp1-201ENSMUST00000035164 Trap1aP19473 224 aa12.96□□□□□ -0.34
Topbp1-201ENSMUST00000035164 EmbP21995 330 aa12.96□□□□□ -0.34
Topbp1-201ENSMUST00000035164 Cdkl5Q3UTQ8 938 aa12.96□□□□□ -0.34
Topbp1-201ENSMUST00000035164 Iqgap3F8VQ29 1632 aa12.95□□□□□ -0.34
Topbp1-201ENSMUST00000035164 Ano2Q8CFW1 1002 aa12.95□□□□□ -0.34
Topbp1-201ENSMUST00000035164 Matr3Q8K310 846 aaKnown RBP12.95□□□□□ -0.34
Topbp1-201ENSMUST00000035164 Pdcd6ipQ9WU78 869 aaKnown RBP12.95□□□□□ -0.34
Topbp1-201ENSMUST00000035164 Ctdspl2Q8BG15 465 aa12.95□□□□□ -0.34
Topbp1-201ENSMUST00000035164 Zfpm1O35615 995 aa12.95□□□□□ -0.34
Topbp1-201ENSMUST00000035164 Nap1l1P28656 391 aaKnown RBP12.95□□□□□ -0.34
Topbp1-201ENSMUST00000035164 Cfap100Q80VN0 613 aa12.95□□□□□ -0.34
Topbp1-201ENSMUST00000035164 Kcnj14Q8JZN3 434 aa12.95□□□□□ -0.34
Topbp1-201ENSMUST00000035164 CerkQ8K4Q7 531 aa12.95□□□□□ -0.34
Topbp1-201ENSMUST00000035164 GptQ8QZR5 496 aa12.95□□□□□ -0.34
Topbp1-201ENSMUST00000035164 Mei1Q9D4I2 1268 aa12.95□□□□□ -0.34
Topbp1-201ENSMUST00000035164 Neurl4Q5NCX5 1563 aa12.94□□□□□ -0.34
Topbp1-201ENSMUST00000035164 Gm21680A0A0G2JGR8 267 aa12.94□□□□□ -0.34
Topbp1-201ENSMUST00000035164 Gm28047Q3US59 414 aa12.94□□□□□ -0.34
Topbp1-201ENSMUST00000035164 Recql4Q75NR7 1216 aaKnown RBP12.94□□□□□ -0.34
Topbp1-201ENSMUST00000035164 Krt84Q99M73 603 aa12.94□□□□□ -0.34
Topbp1-201ENSMUST00000035164 Gm43638A0A0J9YU36 694 aa12.94□□□□□ -0.34
Topbp1-201ENSMUST00000035164 Sycp2lA0A0M3U1B0 842 aa12.94□□□□□ -0.34
Topbp1-201ENSMUST00000035164 Pramel3A2AHA7 463 aa12.94□□□□□ -0.34
Topbp1-201ENSMUST00000035164 Gm7903A2AWL1 463 aa12.94□□□□□ -0.34
Topbp1-201ENSMUST00000035164 AV320801A2AWL3 467 aa12.94□□□□□ -0.34
Topbp1-201ENSMUST00000035164 Gm15023L7MUB4 467 aa12.94□□□□□ -0.34
Topbp1-201ENSMUST00000035164 Gtpbp6Q3U6U5 514 aa12.94□□□□□ -0.34
Topbp1-201ENSMUST00000035164 Ttc37F8VPK0 1563 aa12.94□□□□□ -0.34
Topbp1-201ENSMUST00000035164 Cyp2j7A0A140T8U1 504 aa12.94□□□□□ -0.34
Topbp1-201ENSMUST00000035164 Myo1bP46735 1107 aa12.94□□□□□ -0.34
Topbp1-201ENSMUST00000035164 LarsQ8BMJ2 1178 aa12.94□□□□□ -0.34
Topbp1-201ENSMUST00000035164 Cfap45Q9D9U9 551 aa12.94□□□□□ -0.34
Topbp1-201ENSMUST00000035164 Zbtb43Q9DAI4 467 aa12.94□□□□□ -0.34
Topbp1-201ENSMUST00000035164 NapbP28663 298 aa12.94□□□□□ -0.34
Topbp1-201ENSMUST00000035164 Pafah1b1P63005 410 aaKnown RBP12.94□□□□□ -0.34
Topbp1-201ENSMUST00000035164 Sp8Q8BMJ8 486 aa12.94□□□□□ -0.34
Topbp1-201ENSMUST00000035164 Ulbp1Q8HWA3 334 aa12.94□□□□□ -0.34
Topbp1-201ENSMUST00000035164 Gimap6Q8K349 305 aa12.94□□□□□ -0.34
Topbp1-201ENSMUST00000035164 Kiaa0556Q8C753 1610 aa12.93□□□□□ -0.34
Topbp1-201ENSMUST00000035164 Adam1aQ60813 791 aa12.93□□□□□ -0.34
Topbp1-201ENSMUST00000035164 Vps33aQ9D2N9 598 aa12.93□□□□□ -0.34
Topbp1-201ENSMUST00000035164 Naa16Q9DBB4 864 aa12.93□□□□□ -0.34
Topbp1-201ENSMUST00000035164 MaddQ80U28 1577 aa12.93□□□□□ -0.34
Topbp1-201ENSMUST00000035164 Rgs22G3UYX5 1258 aa12.93□□□□□ -0.34
Topbp1-201ENSMUST00000035164 Fam107bQ3TGF2 131 aa12.93□□□□□ -0.34
Topbp1-201ENSMUST00000035164 Mst1rQ62190 1378 aa12.93□□□□□ -0.34
Topbp1-201ENSMUST00000035164 Cdc37Q61081 379 aa12.93□□□□□ -0.34
Topbp1-201ENSMUST00000035164 EcsitQ9QZH6 435 aa12.93□□□□□ -0.34
Topbp1-201ENSMUST00000035164 Rnf123Q5XPI3 1314 aa12.93□□□□□ -0.34
Topbp1-201ENSMUST00000035164 Sult6b1P0CC03 303 aa12.93□□□□□ -0.34
Topbp1-201ENSMUST00000035164 Tpcn2Q8BWC0 731 aa12.93□□□□□ -0.34
Topbp1-201ENSMUST00000035164 Tango6Q8C3S2 1079 aa12.93□□□□□ -0.34
Topbp1-201ENSMUST00000035164 TnksQ6PFX9 1320 aa12.92□□□□□ -0.34
Topbp1-201ENSMUST00000035164 Trpm1Q2TV84 1622 aa12.92□□□□□ -0.34
Topbp1-201ENSMUST00000035164 Zscan20B2KFW1 1030 aa12.92□□□□□ -0.34
Topbp1-201ENSMUST00000035164 Znf704Q9ERQ3 566 aa12.92□□□□□ -0.34
Topbp1-201ENSMUST00000035164 Eif2ak3Q9Z2B5 1114 aa12.92□□□□□ -0.34
Topbp1-201ENSMUST00000035164 Prl3d3A0A0M6L0J6 224 aa12.92□□□□□ -0.34
Topbp1-201ENSMUST00000035164 Enc1O35709 589 aa12.92□□□□□ -0.34
Topbp1-201ENSMUST00000035164 Ift88Q61371 824 aa12.92□□□□□ -0.34
Topbp1-201ENSMUST00000035164 Ctr9Q62018 1173 aaKnown RBP12.92□□□□□ -0.34
Topbp1-201ENSMUST00000035164 Cyp4f39Q8BGU0 532 aa12.92□□□□□ -0.34
Topbp1-201ENSMUST00000035164 Slc13a4Q8BZ82 625 aa12.92□□□□□ -0.34
Topbp1-201ENSMUST00000035164 Mb21d2Q8C525 428 aa12.92□□□□□ -0.34
Topbp1-201ENSMUST00000035164 Cd209bQ8CJ91 325 aa12.92□□□□□ -0.34
Topbp1-201ENSMUST00000035164 Kri1Q8VDQ9 704 aaKnown RBP12.92□□□□□ -0.34
Topbp1-201ENSMUST00000035164 Yeats4Q9CR11 227 aaKnown RBP12.92□□□□□ -0.34
Topbp1-201ENSMUST00000035164 Ess2O70279 479 aa12.92□□□□□ -0.34
Topbp1-201ENSMUST00000035164 Q8BT18 775 aa12.92□□□□□ -0.34
Topbp1-201ENSMUST00000035164 9230110C19RikQ8CC70 267 aa12.92□□□□□ -0.34
Topbp1-201ENSMUST00000035164 Trim29Q8R2Q0 587 aa12.92□□□□□ -0.34
Retrieved 100 of 22,080 RNA–protein pairs in 36.5 ms