RNA–Protein interactions for RNA: ENSMUST00000033898.9

Col4a1-201, Transcript of Collagen alpha-1(IV) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col4a1, Length 6,615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1-201ENSMUST00000033898 Fam213aQ9CYH2 218 aa16.13■□□□□ 0.17
Col4a1-201ENSMUST00000033898 Vps54Q5SPW0 977 aa16.13■□□□□ 0.17
Col4a1-201ENSMUST00000033898 Ints8Q80V86 995 aa16.13■□□□□ 0.17
Col4a1-201ENSMUST00000033898 Drc1Q3USS3 753 aa16.13■□□□□ 0.17
Col4a1-201ENSMUST00000033898 CtcfQ61164 736 aaKnown RBP16.13■□□□□ 0.17
Col4a1-201ENSMUST00000033898 Tsga10Q6NY15 697 aa16.13■□□□□ 0.17
Col4a1-201ENSMUST00000033898 Enox2Q8R0Z2 598 aa16.13■□□□□ 0.17
Col4a1-201ENSMUST00000033898 Atp2a2O55143 1044 aaKnown RBP16.13■□□□□ 0.17
Col4a1-201ENSMUST00000033898 Parp1P11103 1013 aaKnown RBP16.12■□□□□ 0.17
Col4a1-201ENSMUST00000033898 ZfxP17012 799 aa16.12■□□□□ 0.17
Col4a1-201ENSMUST00000033898 Krt77Q6IFZ6 572 aa16.12■□□□□ 0.17
Col4a1-201ENSMUST00000033898 Atp1a2Q6PIE5 1020 aa16.12■□□□□ 0.17
Col4a1-201ENSMUST00000033898 AdpgkQ8VDL4 496 aa16.12■□□□□ 0.17
Col4a1-201ENSMUST00000033898 Sec63Q8VHE0 760 aaKnown RBP16.12■□□□□ 0.17
Col4a1-201ENSMUST00000033898 Ccpg1Q640L3 753 aa16.12■□□□□ 0.17
Col4a1-201ENSMUST00000033898 Mpp4Q6P7F1 635 aa16.12■□□□□ 0.17
Col4a1-201ENSMUST00000033898 Fchsd1Q6PFY1 688 aa16.12■□□□□ 0.17
Col4a1-201ENSMUST00000033898 Bin2D3Z6Q9 489 aa16.12■□□□□ 0.17
Col4a1-201ENSMUST00000033898 Ddb1Q3U1J4 1140 aaKnown RBP16.12■□□□□ 0.17
Col4a1-201ENSMUST00000033898 Ccdc94Q9D6J3 314 aa16.12■□□□□ 0.17
Col4a1-201ENSMUST00000033898 Gm38392E9Q2A2 434 aa16.12■□□□□ 0.17
Col4a1-201ENSMUST00000033898 Ak2Q9WTP6 239 aa16.12■□□□□ 0.17
Col4a1-201ENSMUST00000033898 Ubash3aQ3V3E1 624 aa16.11■□□□□ 0.17
Col4a1-201ENSMUST00000033898 Myl10Q62082 202 aa16.11■□□□□ 0.17
Col4a1-201ENSMUST00000033898 Syce1Q9D495 329 aa16.11■□□□□ 0.17
Col4a1-201ENSMUST00000033898 Pdia3P27773 505 aaKnown RBP16.11■□□□□ 0.17
Col4a1-201ENSMUST00000033898 Ppp4r3aQ6P2K6 820 aa16.11■□□□□ 0.17
Col4a1-201ENSMUST00000033898 Ccdc113Q8C5T8 377 aa16.11■□□□□ 0.17
Col4a1-201ENSMUST00000033898 Spata16Q8C636 571 aa16.11■□□□□ 0.17
Col4a1-201ENSMUST00000033898 Tbc1d32Q3URV1 1296 aa16.11■□□□□ 0.17
Col4a1-201ENSMUST00000033898 Ankrd24Q80VM7 985 aa16.11■□□□□ 0.17
Col4a1-201ENSMUST00000033898 Crybg3Q80W49 1005 aa16.11■□□□□ 0.17
Col4a1-201ENSMUST00000033898 Pcdhb5Q91XZ5 792 aa16.11■□□□□ 0.17
Col4a1-201ENSMUST00000033898 RtcbQ99LF4 505 aaKnown RBP16.11■□□□□ 0.17
Col4a1-201ENSMUST00000033898 Cnpy2Q9QXT0 182 aa16.11■□□□□ 0.17
Col4a1-201ENSMUST00000033898 Akr1b8P45377 316 aa16.11■□□□□ 0.17
Col4a1-201ENSMUST00000033898 Lin9Q8C735 542 aa16.11■□□□□ 0.17
Col4a1-201ENSMUST00000033898 Gdpd2Q9ESM6 539 aa16.11■□□□□ 0.17
Col4a1-201ENSMUST00000033898 SpopQ6ZWS8 374 aa16.11■□□□□ 0.17
Col4a1-201ENSMUST00000033898 Kank1E9Q238 1360 aa16.11■□□□□ 0.17
Col4a1-201ENSMUST00000033898 Ranbp1P34022 203 aaKnown RBP16.1■□□□□ 0.17
Col4a1-201ENSMUST00000033898 Trim68Q8K243 485 aa16.1■□□□□ 0.17
Col4a1-201ENSMUST00000033898 Neo1P97798 1493 aa16.1■□□□□ 0.17
Col4a1-201ENSMUST00000033898 Parp2O88554 559 aa16.1■□□□□ 0.17
Col4a1-201ENSMUST00000033898 DmtnQ9WV69 405 aa16.1■□□□□ 0.17
Col4a1-201ENSMUST00000033898 Apol7aB2RT54 418 aa16.1■□□□□ 0.17
Col4a1-201ENSMUST00000033898 PrphP15331 475 aa16.1■□□□□ 0.17
Col4a1-201ENSMUST00000033898 Eps15P42567 897 aa16.1■□□□□ 0.17
Col4a1-201ENSMUST00000033898 Opa1P58281 960 aa16.1■□□□□ 0.17
Col4a1-201ENSMUST00000033898 Kdm1aQ6ZQ88 853 aa16.1■□□□□ 0.17
Col4a1-201ENSMUST00000033898 HgsQ99LI8 775 aa16.1■□□□□ 0.17
Col4a1-201ENSMUST00000033898 Rfc1P35601 1131 aa16.1■□□□□ 0.17
Col4a1-201ENSMUST00000033898 Map3k11Q80XI6 850 aa16.1■□□□□ 0.17
Col4a1-201ENSMUST00000033898 Gpr161B2RPY5 545 aa16.1■□□□□ 0.17
Col4a1-201ENSMUST00000033898 Clul1Q3ZRW6 464 aa16.09■□□□□ 0.17
Col4a1-201ENSMUST00000033898 Cplx3Q8R1B5 158 aa16.09■□□□□ 0.17
Col4a1-201ENSMUST00000033898 LratQ9JI60 231 aa16.09■□□□□ 0.17
Col4a1-201ENSMUST00000033898 Ccdc85cE9Q6B2 420 aa16.09■□□□□ 0.17
Col4a1-201ENSMUST00000033898 Diaph1O08808 1255 aa16.09■□□□□ 0.17
Col4a1-201ENSMUST00000033898 Iqsec3Q3TES0 1195 aa16.09■□□□□ 0.17
Col4a1-201ENSMUST00000033898 PdiltQ9DAN1 588 aa16.09■□□□□ 0.17
Col4a1-201ENSMUST00000033898 Ehbp1Q69ZW3 1231 aa16.09■□□□□ 0.17
Col4a1-201ENSMUST00000033898 Ppp4r4Q8C0Y0 875 aa16.09■□□□□ 0.17
Col4a1-201ENSMUST00000033898 Rbm17Q8JZX4 405 aaKnown RBP16.09■□□□□ 0.17
Col4a1-201ENSMUST00000033898 Atp8b2P98199 1209 aa16.09■□□□□ 0.17
Col4a1-201ENSMUST00000033898 Acot11Q8VHQ9 594 aa16.09■□□□□ 0.17
Col4a1-201ENSMUST00000033898 Dnajc10Q9DC23 793 aa16.09■□□□□ 0.17
Col4a1-201ENSMUST00000033898 Gadd45bP22339 160 aa16.09■□□□□ 0.17
Col4a1-201ENSMUST00000033898 Map3k12Q60700 888 aa16.09■□□□□ 0.17
Col4a1-201ENSMUST00000033898 Cct6bQ61390 531 aa16.09■□□□□ 0.17
Col4a1-201ENSMUST00000033898 Ccdc91Q9D8L5 442 aa16.09■□□□□ 0.17
Col4a1-201ENSMUST00000033898 Tiam1Q60610 1591 aa16.08■□□□□ 0.17
Col4a1-201ENSMUST00000033898 Gm2030D3Z7C4 212 aa16.08■□□□□ 0.17
Col4a1-201ENSMUST00000033898 Rbm33Q9CXK9 1231 aaKnown RBP16.08■□□□□ 0.17
Col4a1-201ENSMUST00000033898 Sh2d4bA6X942 431 aa16.08■□□□□ 0.16
Col4a1-201ENSMUST00000033898 Speer2E9Q9U2 264 aa16.08■□□□□ 0.16
Col4a1-201ENSMUST00000033898 Slc38a10Q5I012 1090 aa16.08■□□□□ 0.16
Col4a1-201ENSMUST00000033898 Bicc1Q99MQ1 977 aaKnown RBP16.08■□□□□ 0.16
Col4a1-201ENSMUST00000033898 Trim6Q8BGE7 488 aa16.08■□□□□ 0.16
Col4a1-201ENSMUST00000033898 Vps52Q8C754 723 aaKnown RBP16.08■□□□□ 0.16
Col4a1-201ENSMUST00000033898 Fam163aQ8CAA5 168 aa16.08■□□□□ 0.16
Col4a1-201ENSMUST00000033898 Gm1993A6X8I0 212 aa16.08■□□□□ 0.16
Col4a1-201ENSMUST00000033898 SlxD3Z347 212 aa16.08■□□□□ 0.16
Col4a1-201ENSMUST00000033898 Kif5cP28738 956 aaKnown RBP16.08■□□□□ 0.16
Col4a1-201ENSMUST00000033898 Hmgb1P63158 215 aaKnown RBP16.08■□□□□ 0.16
Col4a1-201ENSMUST00000033898 Fmnl3Q6ZPF4 1028 aa16.08■□□□□ 0.16
Col4a1-201ENSMUST00000033898 Taf7lQ9D3R9 471 aa16.08■□□□□ 0.16
Col4a1-201ENSMUST00000033898 Ccnt1Q9QWV9 724 aaKnown RBP16.08■□□□□ 0.16
Col4a1-201ENSMUST00000033898 Mybl2P48972 704 aa16.08■□□□□ 0.16
Col4a1-201ENSMUST00000033898 Lrp2bpQ9D4C6 346 aa16.08■□□□□ 0.16
Col4a1-201ENSMUST00000033898 Sorbs3Q9R1Z8 733 aa16.08■□□□□ 0.16
Col4a1-201ENSMUST00000033898 Gna11P21278 359 aa16.07■□□□□ 0.16
Col4a1-201ENSMUST00000033898 Tsta3P23591 321 aa16.07■□□□□ 0.16
Col4a1-201ENSMUST00000033898 Pdrg1P59048 133 aa16.07■□□□□ 0.16
Col4a1-201ENSMUST00000033898 Agbl1Q09M05 972 aa16.07■□□□□ 0.16
Col4a1-201ENSMUST00000033898 Foxd4Q60688 444 aa16.07■□□□□ 0.16
Col4a1-201ENSMUST00000033898 Prr16A3KMN5 304 aa16.07■□□□□ 0.16
Col4a1-201ENSMUST00000033898 Ifit2Q64112 472 aa16.07■□□□□ 0.16
Col4a1-201ENSMUST00000033898 Nap1l4Q78ZA7 375 aaKnown RBP16.07■□□□□ 0.16
Col4a1-201ENSMUST00000033898 Armc9Q9D2I5 817 aa16.07■□□□□ 0.16
Retrieved 100 of 22,080 RNA–protein pairs in 11.8 ms