RNA–Protein interactions for RNA: ENSMUST00000027127.13

Sf3b1-201, Transcript of Splicing factor 3B subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b1, Length 6,195 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1-201ENSMUST00000027127 PcQ05920 1178 aa9.81□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Anp32cQ64G17 123 aa9.81□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Ppp2r5bQ6PD28 497 aa9.81□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Foxo3Q9WVH4 672 aa9.81□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Gpr182P43142 395 aa9.81□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Usp44Q8C2S0 711 aa9.81□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Wdr24Q8CFJ9 790 aa9.81□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Brms1Q99N20 246 aa9.81□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Krt23Q99PS0 422 aa9.81□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Map2P20357 1828 aa9.81□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Epb41l2O70318 988 aaKnown RBP9.81□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Csrnp1P59054 583 aa9.81□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Ano10Q8BH79 659 aa9.81□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Mb21d2Q8C525 428 aa9.81□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Qtrt2B8ZXI1 415 aa9.8□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Rad23bP54728 416 aa9.8□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Taf3Q5HZG4 932 aa9.8□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Mrpl50Q8VDT9 159 aaKnown RBP9.8□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Col4a3bpQ9EQG9 624 aa9.8□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 A0A1W2P7S8 802 aa9.8□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Klhl34A2AI76 644 aa9.8□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Fbxl16A2RT62 479 aa9.8□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Jakmip2D3YXK0 820 aa9.8□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Atg9aQ68FE2 551 aa9.8□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Cdc5lQ6A068 802 aaKnown RBP9.8□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Abcf1Q6P542 837 aaKnown RBP9.8□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Tbc1d5Q80XQ2 815 aa9.8□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 DymQ8CHY3 669 aa9.8□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Gpr108Q91WD0 569 aa9.8□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Ltb4r2Q9JJL9 360 aa9.8□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 SnrkQ8VDU5 748 aa9.8□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Krt82Q99M74 516 aa9.8□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Yeats4Q9CR11 227 aaKnown RBP9.8□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Naa16Q9DBB4 864 aa9.8□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Kcnq5Q9JK45 933 aa9.8□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Gm9992B2RWK3 458 aa9.8□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Dnm1P39053 867 aa9.8□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 RubcnlQ3TD16 648 aa9.8□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Ell2Q3UKU1 639 aa9.8□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Unc93aQ710D3 458 aa9.8□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Iqca1Q9CUL5 857 aa9.8□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Dydc2Q9D3X8 139 aa9.8□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Osbpl5Q9ER64 874 aa9.8□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Miga2Q8BK03 593 aa9.79□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Ipo7Q9EPL8 1038 aaKnown RBP9.79□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Carmil3Q3UFQ8 1375 aa9.79□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Sycp2lA0A0M3U1B0 842 aa9.79□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Anxa1P10107 346 aaKnown RBP9.79□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Gas2l3Q3UWW6 683 aa9.79□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Fam102bQ8BQS4 339 aa9.79□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Ttc12Q8BW49 704 aa9.79□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Sde2Q8K1J5 448 aaKnown RBP9.79□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Zbtb1Q91VL9 713 aa9.79□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Cfap45Q9D9U9 551 aa9.79□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 SfswapQ3USH5 945 aaKnown RBP9.79□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Prm3Q62100 101 aa9.79□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Sil1Q9EPK6 465 aa9.79□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Ktn1Q61595 1327 aaKnown RBP9.79□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Zscan25B2RX31 543 aa9.78□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Gm7347D3YYI9 267 aa9.78□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 1700029H14RikE9PY36 240 aa9.78□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Speer4aF8VPX6 267 aa9.78□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Dapk3O54784 448 aa9.78□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Fkbp1aP26883 108 aaKnown RBP9.78□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Adam1aQ60813 791 aa9.78□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Tpm4Q6IRU2 248 aa9.78□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Lmod1Q8BVA4 595 aa9.78□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Paf1Q8K2T8 535 aa9.78□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Ahnak2E9PYB0 1738 aaKnown RBP9.78□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Prr5lA2AVJ5 370 aa9.78□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Ube4aE9Q735 1028 aa9.78□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Mindy4Q3UQI9 744 aa9.78□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Slc14a2Q8R4T9 930 aa9.78□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Kri1Q8VDQ9 704 aaKnown RBP9.78□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Nkx2-3P97334 362 aa9.78□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Ccdc129Q14B48 1034 aa9.78□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Cep89Q9CZX2 791 aa9.78□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Irs4Q9Z0Y7 1216 aa9.78□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Api5O35841 504 aaKnown RBP9.78□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Nme8Q715T0 586 aa9.78□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Rtn1Q8K0T0 780 aa9.78□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Med23Q80YQ2 1367 aa9.78□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Gm45140A0A0N4SUM8 220 aa9.77□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Pip4k2aO70172 405 aa9.77□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 NpeppsQ11011 920 aa9.77□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Mknk2Q8CDB0 459 aa9.77□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Nop2Q922K7 793 aaKnown RBP9.77□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Spata31d1bE9QA57 1361 aa9.77□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 SdsQ8VBT2 327 aa9.77□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 FliiQ9JJ28 1271 aa9.77□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 MetP16056 1379 aa9.77□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Odf2A3KGV1 830 aaKnown RBP9.77□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Bin2D3Z6Q9 489 aa9.77□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Sept1P42209 366 aa9.77□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Clcn1Q64347 994 aa9.77□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Pram1Q6BCL1 675 aa9.77□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Ercc6lQ8BHK9 1240 aa9.77□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 1700113H08RikE9Q9Q5 327 aa9.77□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Dctn1O08788 1281 aa9.77□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Mrpl12Q9DB15 201 aaKnown RBP9.77□□□□□ -0.85
Retrieved 100 of 22,080 RNA–protein pairs in 31.4 ms