RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 C18orf12Q96KH6 178 aa14.59□□□□□ -0.07
PHGDH-211ENST00000641213 ZNF488Q96MN9 340 aa14.59□□□□□ -0.07
PHGDH-211ENST00000641213 TMEM100Q9NV29 134 aa14.59□□□□□ -0.07
PHGDH-211ENST00000641213 CLCF1Q9UBD9 225 aa14.59□□□□□ -0.07
PHGDH-211ENST00000641213 HOXD4P09016 255 aaPredicted RBP14.59□□□□□ -0.07
PHGDH-211ENST00000641213 GLI4P10075 376 aa14.59□□□□□ -0.07
PHGDH-211ENST00000641213 ZNF14P17017 642 aaPredicted RBP14.59□□□□□ -0.07
PHGDH-211ENST00000641213 CA6P23280 308 aa14.59□□□□□ -0.07
PHGDH-211ENST00000641213 GNG3P63215 75 aa14.59□□□□□ -0.07
PHGDH-211ENST00000641213 TBC1D28Q2M2D7 210 aa14.59□□□□□ -0.07
PHGDH-211ENST00000641213 ZNF573Q86YE8 665 aa14.59□□□□□ -0.07
PHGDH-211ENST00000641213 CCDC71LQ8N9Z2 235 aa14.59□□□□□ -0.07
PHGDH-211ENST00000641213 PCDHB10Q9UN67 800 aa14.59□□□□□ -0.07
PHGDH-211ENST00000641213 HSPB6O14558 160 aa14.58□□□□□ -0.08
PHGDH-211ENST00000641213 LRP3O75074 770 aa14.58□□□□□ -0.08
PHGDH-211ENST00000641213 CELA3BP08861 270 aa14.58□□□□□ -0.08
PHGDH-211ENST00000641213 SCTP09683 121 aa14.58□□□□□ -0.08
PHGDH-211ENST00000641213 WT1P19544 449 aaPredicted RBP14.58□□□□□ -0.08
PHGDH-211ENST00000641213 SMCO1Q147U7 214 aa14.58□□□□□ -0.08
PHGDH-211ENST00000641213 TSC22D1Q15714 1073 aa14.58□□□□□ -0.08
PHGDH-211ENST00000641213 OR2A2Q6IF42 318 aa14.58□□□□□ -0.08
PHGDH-211ENST00000641213 C17orf50Q8WW18 174 aa14.58□□□□□ -0.08
PHGDH-211ENST00000641213 PLK3Q9H4B4 646 aa14.58□□□□□ -0.08
PHGDH-211ENST00000641213 GLRX2Q9NS18 164 aa14.58□□□□□ -0.08
PHGDH-211ENST00000641213 LHX6Q9UPM6 363 aa14.58□□□□□ -0.08
PHGDH-211ENST00000641213 LSM5Q9Y4Y9 91 aaKnown RBP14.58□□□□□ -0.08
PHGDH-211ENST00000641213 A0A1W2PR80 420 aa14.57□□□□□ -0.08
PHGDH-211ENST00000641213 H7C1Q1 480 aa14.57□□□□□ -0.08
PHGDH-211ENST00000641213 TAAR5O14804 337 aa14.57□□□□□ -0.08
PHGDH-211ENST00000641213 WISP2O76076 250 aa14.57□□□□□ -0.08
PHGDH-211ENST00000641213 IGHV1-2P23083 117 aa14.57□□□□□ -0.08
PHGDH-211ENST00000641213 RPL12P30050 165 aaKnown RBP14.57□□□□□ -0.08
PHGDH-211ENST00000641213 IL24Q13007 206 aa14.57□□□□□ -0.08
PHGDH-211ENST00000641213 LINC00596Q86U02 117 aa14.57□□□□□ -0.08
PHGDH-211ENST00000641213 GCNT2Q8N0V5 402 aa14.57□□□□□ -0.08
PHGDH-211ENST00000641213 LGI3Q8N145 548 aa14.57□□□□□ -0.08
PHGDH-211ENST00000641213 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.57□□□□□ -0.08
PHGDH-211ENST00000641213 SUMF2Q8NBJ7 301 aa14.57□□□□□ -0.08
PHGDH-211ENST00000641213 NEK7Q8TDX7 302 aa14.57□□□□□ -0.08
PHGDH-211ENST00000641213 RNF141Q8WVD5 230 aa14.57□□□□□ -0.08
PHGDH-211ENST00000641213 PRRX2Q99811 253 aa14.57□□□□□ -0.08
PHGDH-211ENST00000641213 PIGMQ9H3S5 423 aa14.57□□□□□ -0.08
PHGDH-211ENST00000641213 OR2S2Q9NQN1 319 aa14.57□□□□□ -0.08
PHGDH-211ENST00000641213 ASF1BQ9NVP2 202 aa14.57□□□□□ -0.08
PHGDH-211ENST00000641213 PHF1O43189 567 aaPredicted RBP14.57□□□□□ -0.08
PHGDH-211ENST00000641213 SCGB1D2O95969 90 aa14.57□□□□□ -0.08
PHGDH-211ENST00000641213 MBPP02686 304 aaPredicted RBP14.57□□□□□ -0.08
PHGDH-211ENST00000641213 FAM157CP0CG43 387 aa14.57□□□□□ -0.08
PHGDH-211ENST00000641213 GNRHRP30968 328 aa14.57□□□□□ -0.08
PHGDH-211ENST00000641213 HERPUD1Q15011 391 aa14.57□□□□□ -0.08
PHGDH-211ENST00000641213 IGFL2Q6UWQ7 119 aa14.57□□□□□ -0.08
PHGDH-211ENST00000641213 BOLLQ8N9W6 283 aaKnown RBP14.57□□□□□ -0.08
PHGDH-211ENST00000641213 LHFPL5Q8TAF8 219 aa14.57□□□□□ -0.08
PHGDH-211ENST00000641213 MARC2Q969Z3 335 aa14.57□□□□□ -0.08
PHGDH-211ENST00000641213 PKIBQ9C010 78 aa14.57□□□□□ -0.08
PHGDH-211ENST00000641213 MS4A7Q9GZW8 240 aaPredicted RBP14.57□□□□□ -0.08
PHGDH-211ENST00000641213 OR51I2Q9H344 312 aa14.57□□□□□ -0.08
PHGDH-211ENST00000641213 ZC4H2Q9NQZ6 224 aa14.57□□□□□ -0.08
PHGDH-211ENST00000641213 C3orf80F5H4A9 247 aa14.56□□□□□ -0.08
PHGDH-211ENST00000641213 K7EPK0 472 aa14.56□□□□□ -0.08
PHGDH-211ENST00000641213 BET1O15155 118 aa14.56□□□□□ -0.08
PHGDH-211ENST00000641213 MPPED1O15442 326 aa14.56□□□□□ -0.08
PHGDH-211ENST00000641213 TK1P04183 234 aa14.56□□□□□ -0.08
PHGDH-211ENST00000641213 KCNJ3P48549 501 aa14.56□□□□□ -0.08
PHGDH-211ENST00000641213 IGFBP7Q16270 282 aa14.56□□□□□ -0.08
PHGDH-211ENST00000641213 RPL7L1Q6DKI1 246 aaKnown RBP14.56□□□□□ -0.08
PHGDH-211ENST00000641213 FBXW12Q6X9E4 464 aa14.56□□□□□ -0.08
PHGDH-211ENST00000641213 FAM58AQ8N1B3 248 aa14.56□□□□□ -0.08
PHGDH-211ENST00000641213 C17orf78Q8N4C9 275 aa14.56□□□□□ -0.08
PHGDH-211ENST00000641213 FAM71E2Q8N5Q1 922 aa14.56□□□□□ -0.08
PHGDH-211ENST00000641213 TRIB1Q96RU8 372 aa14.56□□□□□ -0.08
PHGDH-211ENST00000641213 TP53RKQ96S44 253 aa14.56□□□□□ -0.08
PHGDH-211ENST00000641213 SPACA1Q9HBV2 294 aa14.56□□□□□ -0.08
PHGDH-211ENST00000641213 EP300Q09472 2414 aaPredicted RBP14.56□□□□□ -0.08
PHGDH-211ENST00000641213 PRRC2CQ9Y520 2896 aaKnown RBP14.56□□□□□ -0.08
PHGDH-211ENST00000641213 TRDCB7Z8K6 153 aa14.56□□□□□ -0.08
PHGDH-211ENST00000641213 J3QW42 95 aa14.56□□□□□ -0.08
PHGDH-211ENST00000641213 RHBDL1O75783 438 aa14.56□□□□□ -0.08
PHGDH-211ENST00000641213 DIRAS3O95661 229 aa14.56□□□□□ -0.08
PHGDH-211ENST00000641213 TGFBR3Q03167 851 aa14.56□□□□□ -0.08
PHGDH-211ENST00000641213 LDLRAD3Q86YD5 345 aa14.56□□□□□ -0.08
PHGDH-211ENST00000641213 CCDC36Q8IYA8 594 aa14.56□□□□□ -0.08
PHGDH-211ENST00000641213 SPERTQ8NA61 448 aa14.56□□□□□ -0.08
PHGDH-211ENST00000641213 BPIFCQ8NFQ6 507 aa14.56□□□□□ -0.08
PHGDH-211ENST00000641213 GTF3AQ92664 365 aaKnown RBP14.56□□□□□ -0.08
PHGDH-211ENST00000641213 AMDHD2Q9Y303 409 aa14.56□□□□□ -0.08
PHGDH-211ENST00000641213 SPEF1Q9Y4P9 236 aa14.56□□□□□ -0.08
PHGDH-211ENST00000641213 ATP23Q9Y6H3 246 aa14.56□□□□□ -0.08
PHGDH-211ENST00000641213 FRYQ5TBA9 3013 aa14.55□□□□□ -0.08
PHGDH-211ENST00000641213 TRAV24A0A0B4J272 114 aa14.55□□□□□ -0.08
PHGDH-211ENST00000641213 KIR2DS1A0A191URI9 304 aa14.55□□□□□ -0.08
PHGDH-211ENST00000641213 C3orf85A0A1B0GTC6 90 aa14.55□□□□□ -0.08
PHGDH-211ENST00000641213 HS3ST1O14792 307 aa14.55□□□□□ -0.08
PHGDH-211ENST00000641213 SMPD2O60906 423 aa14.55□□□□□ -0.08
PHGDH-211ENST00000641213 LYZL6O75951 148 aa14.55□□□□□ -0.08
PHGDH-211ENST00000641213 KIR2DS4P43632 304 aa14.55□□□□□ -0.08
PHGDH-211ENST00000641213 NOVA1P51513 510 aaKnown RBP14.55□□□□□ -0.08
PHGDH-211ENST00000641213 IDH3GP51553 393 aaPredicted RBP14.55□□□□□ -0.08
PHGDH-211ENST00000641213 UBE2NP61088 152 aaKnown RBP14.55□□□□□ -0.08
PHGDH-211ENST00000641213 PPP1CBP62140 327 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms