RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 TSPOP30536 169 aa3.79□□□□□ -1.8
SCN3A-209ENST00000639244 HINT1P49773 126 aaPredicted RBP3.79□□□□□ -1.8
SCN3A-209ENST00000639244 RPL27P61353 136 aaKnown RBP3.79□□□□□ -1.8
SCN3A-209ENST00000639244 NHLRC1Q6VVB1 395 aa3.79□□□□□ -1.8
SCN3A-209ENST00000639244 TPRG1Q6ZUI0 275 aa3.79□□□□□ -1.8
SCN3A-209ENST00000639244 ZNF611Q8N823 705 aa3.79□□□□□ -1.8
SCN3A-209ENST00000639244 OR8G5Q8NG78 346 aa3.79□□□□□ -1.8
SCN3A-209ENST00000639244 OXGR1Q96P68 337 aa3.79□□□□□ -1.8
SCN3A-209ENST00000639244 NKX3-1Q99801 234 aaPredicted RBP3.79□□□□□ -1.8
SCN3A-209ENST00000639244 SPATA25Q9BR10 227 aa3.79□□□□□ -1.8
SCN3A-209ENST00000639244 TMEM70Q9BUB7 260 aa3.79□□□□□ -1.8
SCN3A-209ENST00000639244 COL25A1Q9BXS0 654 aaPredicted RBP3.79□□□□□ -1.8
SCN3A-209ENST00000639244 NUDT4Q9NZJ9 180 aa3.79□□□□□ -1.8
SCN3A-209ENST00000639244 B9D1Q9UPM9 204 aa3.79□□□□□ -1.8
SCN3A-209ENST00000639244 TET3O43151 1660 aa3.79□□□□□ -1.8
SCN3A-209ENST00000639244 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP3.79□□□□□ -1.8
SCN3A-209ENST00000639244 CGB1A6NKQ9 187 aa3.79□□□□□ -1.8
SCN3A-209ENST00000639244 B4DGG1 531 aa3.79□□□□□ -1.8
SCN3A-209ENST00000639244 G3V2L1 256 aa3.79□□□□□ -1.8
SCN3A-209ENST00000639244 H3BMH7 237 aa3.79□□□□□ -1.8
SCN3A-209ENST00000639244 GAPDHSO14556 408 aaPredicted RBP3.79□□□□□ -1.8
SCN3A-209ENST00000639244 EML2O95834 649 aa3.79□□□□□ -1.8
SCN3A-209ENST00000639244 H1F0P07305 194 aaKnown RBP3.79□□□□□ -1.8
SCN3A-209ENST00000639244 MALP21145 153 aa3.79□□□□□ -1.8
SCN3A-209ENST00000639244 CYCSP99999 105 aaKnown RBP3.79□□□□□ -1.8
SCN3A-209ENST00000639244 SPATA45Q537H7 98 aa3.79□□□□□ -1.8
SCN3A-209ENST00000639244 ZNF385BQ569K4 471 aa3.79□□□□□ -1.8
SCN3A-209ENST00000639244 PLAG1Q6DJT9 500 aa3.79□□□□□ -1.8
SCN3A-209ENST00000639244 UNQ5815/PRO19632Q6UWF5 114 aa3.79□□□□□ -1.8
SCN3A-209ENST00000639244 GLIS3Q8NEA6 775 aa3.79□□□□□ -1.8
SCN3A-209ENST00000639244 LRRC15Q8TF66 581 aa3.79□□□□□ -1.8
SCN3A-209ENST00000639244 FBLIM1Q8WUP2 373 aa3.79□□□□□ -1.8
SCN3A-209ENST00000639244 LRRC61Q9BV99 259 aa3.79□□□□□ -1.8
SCN3A-209ENST00000639244 SPANXDQ9BXN6 97 aa3.79□□□□□ -1.8
SCN3A-209ENST00000639244 FAM234AQ9H0X4 552 aa3.79□□□□□ -1.8
SCN3A-209ENST00000639244 WSB2Q9NYS7 404 aaPredicted RBP3.79□□□□□ -1.8
SCN3A-209ENST00000639244 IRGMA1A4Y4 181 aa3.79□□□□□ -1.8
SCN3A-209ENST00000639244 LRRC3CA6NJW4 275 aa3.79□□□□□ -1.8
SCN3A-209ENST00000639244 BTG2P78543 158 aa3.79□□□□□ -1.8
SCN3A-209ENST00000639244 SLC6A3Q01959 620 aa3.79□□□□□ -1.8
SCN3A-209ENST00000639244 PPP1R1AQ13522 171 aa3.79□□□□□ -1.8
SCN3A-209ENST00000639244 TIMM23BQ5SRD1 257 aa3.79□□□□□ -1.8
SCN3A-209ENST00000639244 TMEM78Q5T7P6 136 aa3.79□□□□□ -1.8
SCN3A-209ENST00000639244 ZNF730Q6ZMV8 503 aa3.79□□□□□ -1.8
SCN3A-209ENST00000639244 TEX43Q6ZNM6 134 aa3.79□□□□□ -1.8
SCN3A-209ENST00000639244 ZFP62Q8NB50 900 aaPredicted RBP3.79□□□□□ -1.8
SCN3A-209ENST00000639244 OR2M3Q8NG83 312 aa3.79□□□□□ -1.8
SCN3A-209ENST00000639244 TWIST2Q8WVJ9 160 aa3.79□□□□□ -1.8
SCN3A-209ENST00000639244 J3QLI3 93 aa3.78□□□□□ -1.8
SCN3A-209ENST00000639244 TRGC1P0CF51 173 aa3.78□□□□□ -1.8
SCN3A-209ENST00000639244 HTR1DP28221 377 aa3.78□□□□□ -1.8
SCN3A-209ENST00000639244 TGFBR1P36897 503 aa3.78□□□□□ -1.8
SCN3A-209ENST00000639244 HES1Q14469 280 aa3.78□□□□□ -1.8
SCN3A-209ENST00000639244 RGNQ15493 299 aa3.78□□□□□ -1.8
SCN3A-209ENST00000639244 COA6Q5JTJ3 125 aaKnown RBP3.78□□□□□ -1.8
SCN3A-209ENST00000639244 FAM162BQ5T6X4 162 aa3.78□□□□□ -1.8
SCN3A-209ENST00000639244 SIGLECL1Q8N7X8 197 aa3.78□□□□□ -1.8
SCN3A-209ENST00000639244 TMED6Q8WW62 240 aa3.78□□□□□ -1.8
SCN3A-209ENST00000639244 AJAP1Q9UKB5 411 aaPredicted RBP3.78□□□□□ -1.8
SCN3A-209ENST00000639244 NBR2O15453 112 aa3.78□□□□□ -1.8
SCN3A-209ENST00000639244 MOSP00540 346 aa3.78□□□□□ -1.8
SCN3A-209ENST00000639244 RBM11P57052 281 aaKnown RBP3.78□□□□□ -1.8
SCN3A-209ENST00000639244 ZXDBP98169 803 aa3.78□□□□□ -1.8
SCN3A-209ENST00000639244 PNRC1Q12796 327 aaPredicted RBP3.78□□□□□ -1.8
SCN3A-209ENST00000639244 HSPB3Q12988 150 aa3.78□□□□□ -1.8
SCN3A-209ENST00000639244 PRDX4Q13162 271 aa3.78□□□□□ -1.8
SCN3A-209ENST00000639244 TCTN3Q6NUS6 607 aa3.78□□□□□ -1.8
SCN3A-209ENST00000639244 POLR3KQ9Y2Y1 108 aaPredicted RBP3.78□□□□□ -1.8
SCN3A-209ENST00000639244 A0A1W2PS29 197 aa3.78□□□□□ -1.8
SCN3A-209ENST00000639244 FNDC10F2Z333 226 aa3.78□□□□□ -1.8
SCN3A-209ENST00000639244 DEDDO75618 318 aa3.78□□□□□ -1.8
SCN3A-209ENST00000639244 MT-CO3P00414 261 aa3.78□□□□□ -1.8
SCN3A-209ENST00000639244 C1RP00736 705 aa3.78□□□□□ -1.8
SCN3A-209ENST00000639244 PRNPP04156 253 aa3.78□□□□□ -1.8
SCN3A-209ENST00000639244 GCSHP23434 173 aa3.78□□□□□ -1.8
SCN3A-209ENST00000639244 TIA1P31483 386 aaKnown RBP eCLIP3.78□□□□□ -1.8
SCN3A-209ENST00000639244 MAGEA5P43359 124 aa3.78□□□□□ -1.8
SCN3A-209ENST00000639244 IER3P46695 156 aa3.78□□□□□ -1.8
SCN3A-209ENST00000639244 CTU2Q2VPK5 515 aaKnown RBP3.78□□□□□ -1.8
SCN3A-209ENST00000639244 GGTA1PQ4G0N0 100 aa3.78□□□□□ -1.8
SCN3A-209ENST00000639244 TP53I3Q53FA7 332 aa3.78□□□□□ -1.8
SCN3A-209ENST00000639244 C4orf48Q5BLP8 95 aa3.78□□□□□ -1.8
SCN3A-209ENST00000639244 TXNRD3NBQ6F5E7 133 aa3.78□□□□□ -1.8
SCN3A-209ENST00000639244 GLIPR1L1Q6UWM5 242 aa3.78□□□□□ -1.8
SCN3A-209ENST00000639244 ZADH2Q8N4Q0 377 aa3.78□□□□□ -1.8
SCN3A-209ENST00000639244 DTWD2Q8NBA8 298 aa3.78□□□□□ -1.8
SCN3A-209ENST00000639244 GPR32P1Q8NGA4 272 aa3.78□□□□□ -1.8
SCN3A-209ENST00000639244 HMGCLL1Q8TB92 370 aa3.78□□□□□ -1.8
SCN3A-209ENST00000639244 PPCDCQ96CD2 204 aa3.78□□□□□ -1.8
SCN3A-209ENST00000639244 RNF183Q96D59 192 aa3.78□□□□□ -1.8
SCN3A-209ENST00000639244 UBR1Q8IWV7 1749 aa3.78□□□□□ -1.8
SCN3A-209ENST00000639244 A0A1W2PQF6 199 aa3.78□□□□□ -1.8
SCN3A-209ENST00000639244 TMEM229AB2RXF0 380 aa3.78□□□□□ -1.8
SCN3A-209ENST00000639244 ZBTB42B2RXF5 422 aa3.78□□□□□ -1.8
SCN3A-209ENST00000639244 GEMIN2O14893 280 aaKnown RBP3.78□□□□□ -1.8
SCN3A-209ENST00000639244 PRH1P02810 166 aa3.78□□□□□ -1.8
SCN3A-209ENST00000639244 SELENOPP49908 381 aa3.78□□□□□ -1.8
SCN3A-209ENST00000639244 OR10V1Q8NGI7 309 aa3.78□□□□□ -1.8
SCN3A-209ENST00000639244 MBOAT4Q96T53 435 aa3.78□□□□□ -1.8
SCN3A-209ENST00000639244 PPDPFQ9H3Y8 114 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 338.9 ms